FC876352

Overview
NameFC876352
Unique NameFC876352
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6036 contig Ccv1_Contig6036:8..665. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.599e-29
Identity = 67/190 (35.26%), Postives = 103/190 (54.21%), Query Frame = 2
Query:  122 RVQAIASLSHSNGTIPAEFVRPEKE-----QPASATYHGPAPEIPTIDL------DDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV 658
            RV+ +A    S  TIP E++RP+ E            +   P++PTIDL      ++ V+ +    + +A+ +WG+  + NHGI  +L+ K++  GK FF+LP E+KE Y+    +  +QGYG+KL     G+  W D+ FH V+P    +   WP  P  Y     EYAK +RE+  K+   LSLGLG+
Sbjct:   10 RVETLAGSGIS--TIPKEYIRPKDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGL 197          
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 7.934e-29
Identity = 64/175 (36.57%), Postives = 96/175 (54.86%), Query Frame = 2
Query:  164 IPAEFVRPEKEQPASATYH-----GPAPEIPTIDLDD-PVQDRLVRS----IAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV 658
            IP E+VRP++E                P++PTIDL +   +D+ +R     + +A+ EWG+  + NHGI  +LI +++  G+ FF+ P EEKE Y+      +VQGYG+KL     G+  W D+ FH  +P    +   WP NP  Y     EYAK +R +  K+ T LS+GLG+
Sbjct:   23 IPKEYVRPQEELNGIGNIFEEEKKDEGPQVPTIDLKEIDSEDKEIREKCHQLKKAAMEWGVMHLVNHGISDELINRVKVAGETFFDQPVEEKEKYANDQANGNVQGYGSKLANSACGQLEWEDYFFHCAFPEDKRDLSIWPKNPTDYTPATSEYAKQIRALATKILTVLSIGLGL 197          
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.353e-28
Identity = 64/191 (33.51%), Postives = 100/191 (52.36%), Query Frame = 2
Query:  134 IASLSHSN-GTIPAEFVRPEKEQPASATYH-----GPAPEIPTIDLDD----------PVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV 658
            + SLS S   +IP E++RP++E  +             P++PTIDL D           +++R    + +A+ EWG+  + NHGI  DLI +++  G+ FF LP EEKE Y+    +  + GYG+KL     G+  W D+ FH ++P    +   WP  P  Y     EY+  +R +  K+ + LSLGLG+
Sbjct:    9 VESLSSSGIQSIPKEYIRPQEELTSIGNVFEEEKKDEGPQVPTIDLKDIESEDEVVRREIRERCREELKKAAMEWGVMHLVNHGISDDLINRVKVAGETFFNLPMEEKEKYANDQASGKIAGYGSKLANNASGQLEWEDYFFHLIFPEDKRDMTIWPKTPSDYVPATCEYSVKLRSLATKILSVLSLGLGL 199          
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26
Identity = 67/194 (34.54%), Postives = 101/194 (52.06%), Query Frame = 2
Query:  122 RVQAIASLSHSNGTIPAEFVRPEKEQPAS------ATYHG---PAPEIPTID----LDDPVQ----DRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGL 652
            RV+A++    S   IP E+VRP  E+         A  H     AP IP +D    LD   Q    D  V ++  A+ +WG+  +  HGIP++L+ +L+A G  FF LP ++KE Y+    A  +QGYG++L     G++ W D+LFH V P    ++  WP  PP Y A   ++ +  R++   L   LS+GL
Sbjct:   13 RVEALSLSGLS--AIPPEYVRPADERAGLGDAFDLARTHANDHTAPRIPVVDISPFLDSSSQQQQRDECVEAVRAAAADWGVMHIAGHGIPAELMDRLRAAGTAFFALPVQDKEAYANDPAAGRLQGYGSRLATNTCGQREWEDYLFHLVHPDGLADHALWPAYPPDYIAATRDFGRRTRDLASTLLAILSMGL 204          
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.364e-19
Identity = 56/167 (33.53%), Postives = 87/167 (52.10%), Query Frame = 2
Query:  161 TIPAEFVRPEKEQPASATYHGPAPEIPTIDLDDP------VQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLS 643
            T+ + FVR E E+P  A Y+  + EIP I L         V D + R I EA  +WGIFQV NHG+ S+LI ++  + +EFF LP EE   +      K   G+      + E  + W + + +  +P  + +Y  WP+ P  +R+V +EY++ +  +  KL   LS
Sbjct:   14 TLQSSFVRDEDERPKVA-YNDFSNEIPVISLTKESMKLAAVVDEICRKIVEACEDWGIFQVVNHGVDSNLISEMTRLAREFFALPPEENVRFDMSGGKKG--GFIVSSHLQGEAVQDWREIVTYFSYPLRTRDYSRWPDKPEGWRSVTQEYSEKLMGLACKLLEVLS 177          
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.364e-19
Identity = 58/172 (33.72%), Postives = 91/172 (52.91%), Query Frame = 2
Query:  161 TIPAEFVRPEKEQPASATYHGPAPEIPTIDL----DDPVQDR--LVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV 658
            T+ ++FVR E E+P  A Y+  + EIP I L    DD V  R  + R I EA  +WGIFQV +HGI  DLI ++  + ++FF LP EEK  +      K   G+      + E  + W + + +  +P  + +Y  WP+ P  +R++ E Y+  +  +  KL   LS  +G+
Sbjct:   14 TLNSKFVRDEDERPKIA-YNKFSDEIPVISLAGIDDDSVDKRSQICRKIVEACEDWGIFQVVDHGIDIDLISEMTRLARQFFALPAEEKLRFDMTGGKKG--GFIVSSHLQGEAVQDWREIVTYFSYPIQARDYSRWPDKPEGWRSITEMYSDELMALACKLLEVLSEAMGL 182          
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.694e-18
Identity = 60/186 (32.26%), Postives = 94/186 (50.54%), Query Frame = 2
Query:  110 MEVERVQAIASLSHSNGTIPAEFVRPEKEQPASATYHGPAPEIPTIDL---DDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV 658
            M  E+ + + SL   +  + + FVR E E+P  A Y+  + +IP I L   D   +  + R I EA  +WGIFQV +HG+  DLI  +  + +EFF LP EEK  +      K      + LQ EV   + W + + +  +P +S +Y  WP+ P  +  V EEY+  +  +   L   LS  +G+
Sbjct:    1 MVAEKPKTLTSLE-GDDKLNSNFVRDEDERPKVA-YNEFSNDIPVISLAGIDGEKRGEICRKIVEACEDWGIFQVVDHGVGDDLIADMTRLAREFFALPAEEKLRFDMSGGKKGGFIVSSHLQGEV--VQDWREIVTYFSYPTNSRDYTRWPDKPEGWIKVTEEYSNKLMTLACTLLGVLSEAMGL 182          
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.825e-18
Identity = 58/187 (31.02%), Postives = 89/187 (47.59%), Query Frame = 2
Query:  110 MEVERVQAIASLSHSNGTIPAEFVRPEKEQPASATYHGPAPEIPTIDLDDPVQDRL----VRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV 658
            + VE VQ +A     N  +P  +VRPE E            EIP IDL   +  +     +     A  +WG FQ+ NHG+  ++I K++   ++FF LP +EK  Y +  +   ++GYG       E K  W D  F    P    N RFWP +P S+R   E+Y+  +++V   L   ++  LG+
Sbjct:   12 LPVENVQVLAGKELKN--LPNRYVRPELEHDDVVPIDNSL-EIPVIDLSRLLDQQYACDELAKFHSACLDWGFFQLINHGVREEVIEKMKVDTEDFFRLPFKEKNAYRQLPNG--MEGYGQAFVTSEEQKLDWADMHFLITKPVQERNMRFWPTSPTSFRETMEKYSMELQKVAMCLTGMMAKNLGL 193          
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.395e-17
Identity = 58/172 (33.72%), Postives = 88/172 (51.16%), Query Frame = 2
Query:  161 TIPAEFVRPEKEQPASATYHGPAPEIPTIDL---DDPVQDR---LVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV 658
            T+  +FVR E E+P  A Y+  + EIP I L   DD    R   + R I +A  +WGIFQV +HGI S LI ++  + +EFF LP EEK  Y      +      T LQ   +    W + + +  +P ++ +Y  WP  P  +R+  E Y++ +  +  KL   LS  +G+
Sbjct:   14 TLNLDFVRDEDERPKVA-YNQFSNEIPIISLAGLDDDSDGRRPEICRKIVKACEDWGIFQVVDHGIDSGLISEMTRLSREFFALPAEEKLEYDTTGGKRGGFTISTVLQG--DDAMDWREFVTYFSYPINARDYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGL 182          
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.395e-17
Identity = 55/180 (30.56%), Postives = 95/180 (52.78%), Query Frame = 2
Query:  134 IASLSHSNGTIPAEFVRPEKEQPASATYHGPAPEIPTIDLD--DPVQDR---LVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV 658
            + S++H   T+  +FVR E E+P  A Y+  + EIP I L   D V+ R   + + I  A  +WGIFQ+ +HG+ ++LI ++  + +EFF LP EEK  +      K   G+      + E  + W + + +  +P    +Y  WP+ P ++R V ++Y+  +  +  KL   LS  +G+
Sbjct:    7 LTSIAHEK-TLQQKFVRDEDERPKVA-YNDFSNEIPIISLAGIDEVEGRRGEICKKIVAACEDWGIFQIVDHGVDAELISEMTGLAREFFALPSEEKLRFDMSGGKKG--GFIVSSHLQGEAVQDWREIVTYFSYPIRHRDYSRWPDKPEAWREVTKKYSDELMGLACKLLGVLSEAMGL 182          
The following BLAST results are available for this feature:
BLAST of FC876352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
LDOX_MALDO1.599e-2935.26Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
LDOX_PETHY7.934e-2936.57Leucoanthocyanidin dioxygenase OS=Petunia hybrida ... [more]
LDOX_VITVI1.353e-2833.51Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
LDOX_MAIZE2.161e-2634.54Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
FL3H_VITVI4.364e-1933.53Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
FL3H_PETCR4.364e-1933.72Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
FL3H_DIACA3.694e-1832.26Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
NCS1_COPJA4.825e-1831.02S-norcoclaurine synthase 1 OS=Coptis japonica GN=N... [more]
FNSI_PETCR2.395e-1733.72Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
FL3H_MALDO2.395e-1730.56Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32003G06EF DevOvary1 Citrus clementina cDNA clone C32003G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876352 ID=FC876352; Name=FC876352; organism=Citrus clementina; type=EST; length=658bp
GAAGTGCGTAGCGTTACTGCGTCACAGTCGCAGGAAAGGCGCAAGCCAAG
AAAGAGAGAGGGAGAGAAGGAAAAGAAAAGTGGTGGGGTTTTGCTGGAAA
ATAAAATTAATGGAGGTGGAGAGGGTCCAAGCCATTGCTTCCTTATCCCA
TTCAAATGGCACAATTCCAGCAGAGTTCGTAAGACCCGAAAAAGAACAGC
CAGCAAGCGCAACGTACCACGGCCCCGCTCCTGAAATCCCCACGATCGAT
CTCGACGACCCCGTTCAAGACAGACTCGTACGTTCCATCGCGGAAGCCAG
CCGGGAGTGGGGGATTTTCCAGGTTACAAACCACGGGATACCTAGTGACC
TCATCGGTAAACTGCAAGCCGTCGGCAAAGAATTTTTTGAGCTCCCTCAG
GAAGAGAAAGAAGTGTATTCTCGTCCGGCTGATGCAAAAGACGTGCAAGG
ATACGGCACAAAGTTACAGAAAGAAGTCGAAGGAAAGAAATCTTGGGTTG
ATCATCTCTTCCACAGGGTTTGGCCTCCGTCTTCTATCAACTACCGCTTT
TGGCCCAACAACCCTCCTTCTTACCGAGCGGTGAATGAGGAGTATGCAAA
GTACATGAGGGAGGTGGTGGATAAGTTGTTTACGTATCTTTCGTTGGGAC
TGGGTGTC
back to top