FC876352

Overview
NameFC876352
Unique NameFC876352
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length658
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.127e-17
Identity = 55/171 (32.16%), Postives = 90/171 (52.63%), Query Frame = 2
Query:  161 TIPAEFVRPEKEQPASATYHGPAPEIPTIDL---DDPVQDR--LVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV 658
            T+   F+R E E+P  A Y+  + EIP I L   DD    R  +   I +A  +WG+FQV +HG+ +++I ++    KEFF LP EEK  +      K      + LQ EV   + W + + +  +P  + +Y  WP+ P  + AV ++Y++ + E+  KL   LS  +G+
Sbjct:   17 TLQTSFIRDEDERPKVA-YNQFSNEIPIISLEGIDDETGKRAEICDKIVKACEDWGVFQVVDHGVDAEVISQMTTFAKEFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEV--VQDWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGL 184          
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.099e-17
Identity = 52/168 (30.95%), Postives = 85/168 (50.60%), Query Frame = 2
Query:  170 AEFVRPEKEQPASATYHGPAPEIPTIDLD-----DPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV 658
            ++FVR E E+P  A Y+  + EIP I L      D  +  + R I EA   WGIFQV +HG+ + L+  +  + ++FF LP EEK  +      K   G+      + E  + W + + +  +P  + +Y  WP+ P  +  V EEY++ +  +  KL   LS  +G+
Sbjct:   16 SKFVRDEDERPKVA-YNEFSDEIPVISLAGIDDVDGKRGEICREIVEACENWGIFQVVDHGVDTSLVADMTRLARDFFALPPEEKLRFDMSGGKKG--GFIVSSHLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPQGWAKVTEEYSEKLMGLACKLLEVLSEAMGL 180          
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.188e-16
Identity = 51/165 (30.91%), Postives = 85/165 (51.52%), Query Frame = 2
Query:  173 EFVRPEKEQPASATYHGPAPEIPTIDL---DDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV 658
            +FVR E E+P    Y+  + EIP I L   D   +  +   I +A  +WGIFQV +HG+ + L+  +  + ++FF LP +EK  +      K   G+      + E  + W + + +  +P  + +Y  WP+ P  +RAV EEY+K +  +  KL   LS  +G+
Sbjct:   18 KFVRDEDERP-KVPYNTFSNEIPVISLAGIDGCRRAEICDEIVKACEDWGIFQVVDHGVDTKLLSDMTGLARDFFHLPTQEKLRFDMTGGKKG--GFIVSSHLQGEAVQDWREIVTYFSYPIKARDYSRWPDKPNEWRAVTEEYSKVLMGLACKLLEVLSEAMGL 179          
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.027e-16
Identity = 51/168 (30.36%), Postives = 86/168 (51.19%), Query Frame = 2
Query:  170 AEFVRPEKEQPASATYHGPAPEIPTIDLD-----DPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV 658
            ++FVR E E+P  A Y+  + EIP I L      D  +  + R I EA   WGIFQV +HG+ ++L+  +  + ++FF LP E+K  +      K   G+      + E  + W + + +  +P  + +Y  WP+ P  +  V EEY++ +  +  KL   LS  +G+
Sbjct:   17 SKFVRDEDERPKVA-YNVFSDEIPVISLAGIDDVDGKRGEICRQIVEACENWGIFQVVDHGVDTNLVADMTRLARDFFALPPEDKLRFDMSGGKKG--GFIVSSHLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAMGL 181          
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.823e-15
Identity = 48/170 (28.24%), Postives = 80/170 (47.06%), Query Frame = 2
Query:  161 TIPAEFVRPEKEQPASATYHGPAPEIPTIDL----DDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV 658
            T+P  +VR ++++           EIP ID+         D  V  +  A +EWG FQ+ NHGI S  + K+++  ++FF LP EEK+ + +  D  +++G+G       + K  W D  FH V P        +P  P  +R   E Y+  ++ V   L   ++  L +
Sbjct:   28 TVPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKRLCSSTTMDSEVEKLDFACKEWGFFQLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPD--EIEGFGQAFVVSEDQKLDWADLFFHTVQPVELRKPHLFPKLPLPFRDTLEMYSSEVQSVAKILIAKMARALEI 195          
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.993e-15
Identity = 54/167 (32.34%), Postives = 81/167 (48.50%), Query Frame = 2
Query:  182 RPEKEQPASATYHGPAPEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQ-GYGTKLQKEVEGKK-------SWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV 658
            R EK+ P          ++P IDL       LV+ I +A +++G+FQV NHG P +L+ +   V KEFF LP EEKE +    +A   +     K +  VEG++        W D L H   P        WP  P  YR V  +Y+  +R++  ++  Y+  GLG+
Sbjct:   24 RAEKDVPVGN-------DVPIIDLQQH-HHLLVQQITKACQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLYVEGEQLSNEEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGL 182          
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.897e-14
Identity = 49/168 (29.17%), Postives = 81/168 (48.21%), Query Frame = 2
Query:  161 TIPAEFVRPEKEQPASA--TYHGPAPEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV 658
            T+   FVR E E+P  A   +    P I    +D   + ++   +A A  +WGIFQV +HG+ +DLI  +  + +EFF LP E+K  Y      K   G+      + E  + W + + +  +P  + +Y  WP  P  + AV E Y++ +  +   L   LS  +G+
Sbjct:   19 TLRPSFVRDEDERPKVAHDRFSDAVPLISLHGIDGARRAQIRDRVAAACEDWGIFQVIDHGVDADLIADMTRLAREFFALPAEDKLRYDMSGGKKG--GFIVSSHLQGEAVQDWREIVTYFSYPVKARDYGRWPEKPAGWCAVVERYSERLMGLSCNLMGVLSEAMGL 184          
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.956e-12
Identity = 49/168 (29.17%), Postives = 86/168 (51.19%), Query Frame = 2
Query:  161 TIPAEFVRP-EKEQPASATYHGPAPEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEK-EVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV 658
            +IP  F+ P ++  PA+         +P ID+    +D + ++I ++ +E+G  QV NHGI   ++ ++ AV  EFF++P E+K E +S     ++    G+    E  G+K W+D +   ++P  S + + WP+ P   R V   Y    R V  ++   L  GLG+
Sbjct:   14 SIPDSFLLPADRLHPATTDV-----SLPIIDMSRG-RDEVRQAILDSGKEYGFIQVVNHGISEPMLHEMYAVCHEFFDMPAEDKAEFFSEDRSERNKLFCGSAF--ETLGEKYWID-VLELLYPLPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGL 172          
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.151e-11
Identity = 48/157 (30.57%), Postives = 73/157 (46.50%), Query Frame = 2
Query:  197 QPASATYHGPAPE-IPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINY--RFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV 658
            +P+SA       E IP IDL +P    L   I +AS+ WG FQ+ NHGI   L+  ++++ K  F++P E K      +  K V GYG         KK W +     +   S  N+    WP++   Y  + +EY   M ++  +L   +   LGV
Sbjct:   35 RPSSAVSFDAVEESIPVIDLSNPDVTTL---IGDASKTWGAFQIANHGISQKLLDDIESLSKTLFDMPSERK--LEAASSDKGVSGYGEPRISPFFEKKMWSEGF--TIADDSYRNHFNTLWPHDHTKYCGIIQEYVDEMEKLASRLLYCILGSLGV 184          
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.564e-11
Identity = 43/141 (30.50%), Postives = 67/141 (47.52%), Query Frame = 2
Query:  236 IPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV 658
            +P IDL D     +   +  A   WG FQ+TNHG+PS L+  ++ +    F LP + K   +R  +   V GYG         KK W +  F  +  P     + WP++   Y  + EEY ++M+++  KL  +    LGV
Sbjct:   50 LPLIDLSDI---HVATLVGHACTTWGAFQITNHGVPSRLLDDIEFLTGSLFRLPVQRKLKAARSENG--VSGYGVARIASFFNKKMWSEG-FTVIGSPLHDFRKLWPSHHLKYCEIIEEYEEHMQKLAAKLMWFALGSLGV 184          
The following BLAST results are available for this feature:
BLAST of FC876352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
FL3H_PETHY3.127e-1732.16Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_MATIN9.099e-1730.95Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_CALCH1.188e-1630.91Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
FL3H_ARATH2.027e-1630.36Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
SRG1_ARATH3.823e-1528.24Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 ... [more]
HY6H_HYONI4.993e-1532.34Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
FL3H_HORVU1.897e-1429.17Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
IDS2_HORVU3.956e-1229.17Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
G3OX4_ARATH1.151e-1130.57Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
G3OX2_ARATH2.564e-1130.50Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionC32003G06EF DevOvary1 Citrus clementina cDNA clone C32003G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876352 ID=FC876352; Name=FC876352; organism=Citrus clementina; type=EST; length=658bp
GAAGTGCGTAGCGTTACTGCGTCACAGTCGCAGGAAAGGCGCAAGCCAAG
AAAGAGAGAGGGAGAGAAGGAAAAGAAAAGTGGTGGGGTTTTGCTGGAAA
ATAAAATTAATGGAGGTGGAGAGGGTCCAAGCCATTGCTTCCTTATCCCA
TTCAAATGGCACAATTCCAGCAGAGTTCGTAAGACCCGAAAAAGAACAGC
CAGCAAGCGCAACGTACCACGGCCCCGCTCCTGAAATCCCCACGATCGAT
CTCGACGACCCCGTTCAAGACAGACTCGTACGTTCCATCGCGGAAGCCAG
CCGGGAGTGGGGGATTTTCCAGGTTACAAACCACGGGATACCTAGTGACC
TCATCGGTAAACTGCAAGCCGTCGGCAAAGAATTTTTTGAGCTCCCTCAG
GAAGAGAAAGAAGTGTATTCTCGTCCGGCTGATGCAAAAGACGTGCAAGG
ATACGGCACAAAGTTACAGAAAGAAGTCGAAGGAAAGAAATCTTGGGTTG
ATCATCTCTTCCACAGGGTTTGGCCTCCGTCTTCTATCAACTACCGCTTT
TGGCCCAACAACCCTCCTTCTTACCGAGCGGTGAATGAGGAGTATGCAAA
GTACATGAGGGAGGTGGTGGATAAGTTGTTTACGTATCTTTCGTTGGGAC
TGGGTGTC
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