FC876352
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.374e-11 Identity = 49/160 (30.63%), Postives = 72/160 (45.00%), Query Frame = 2 Query: 185 PEKEQPASATYHGPAP--EIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGV 658 P+ + SA PA IP IDLD P I A R WG FQ++NHG+P L+ ++ + F LP + K +R V GYG K+ W + F P + + WP + +Y + EEY ++M+++ KL LGV Sbjct: 38 PKDDLLFSAAPSPPATGENIPLIDLDHP---DATNQIGHACRTWGAFQISNHGVPLGLLQDIEFLTGSLFGLPVQRKLKSAR--SETGVSGYGVARIASFFNKQMWSEG-FTITGSPLNDFRKLWPQHHLNYCDIVEEYEEHMKKLASKLMWLALNSLGV 191
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11 Identity = 51/175 (29.14%), Postives = 82/175 (46.86%), Query Frame = 2 Query: 164 IPAEFVRPEKEQPASATYHGPAPEIPTIDLD-DPVQDR-LVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQE-EKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNE-------EYAKYMREVVDKLFTYLSLGLGV 658 +P FV P K++ H P I +D DP++ + +V + +AS +WG FQV NHGIP+ ++ + ++FFE E +K+ Y+R K V L K SW D +F + P NPPS + +++K ++++ L LS GLG+ Sbjct: 37 VPQIFVLPPKDRAKKCETHFVFPVIDLQGIDEDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVYTSNLDLYKSSVPAASWRDTIFCYMAP-----------NPPSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGL 200
BLAST of FC876352 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11 Identity = 46/147 (31.29%), Postives = 73/147 (49.66%), Query Frame = 2 Query: 236 IPTID---LDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLIGKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKK----SWVDHLFHRVWPPSSINYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLG 655 IP ID LD + + IA EWG FQ+ NHGIP +L+ +++ V E ++L +EE+ S+P D L KE +G++ W D V+ N WP+NPP + +EY + +R++ +K+ + LG Sbjct: 3 IPVIDFSKLDGKERAETMARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECYKL-REERFEGSKPVQLLDT------LVKEGDGQRLDNVDWED-----VFVLQDDNE--WPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLG 135 The following BLAST results are available for this feature:
BLAST of FC876352 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876352 ID=FC876352; Name=FC876352; organism=Citrus clementina; type=EST; length=658bpback to top |