FC876353
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_SYNP2 (Diaminopimelate epimerase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=dapF PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.884e-32 Identity = 64/84 (76.19%), Postives = 69/84 (82.14%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVNDTDYTMRIFNSDGSEPEMCGNGXRCFARFI 663 L F KY GLGNDFIL+DNR T P +TPEQA +LCDR+FGIGADGVIFA+ G DYTMRIFNSDGSEPEMCGNG RC ARFI Sbjct: 3 LEFTKYQGLGNDFILLDNRQQTTPLVTPEQAIQLCDRHFGIGADGVIFALPGQAGADYTMRIFNSDGSEPEMCGNGIRCLARFI 86
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_CYAP8 (Diaminopimelate epimerase OS=Cyanothece sp. (strain PCC 8801) GN=dapF PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.884e-32 Identity = 62/85 (72.94%), Postives = 72/85 (84.71%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVNDTDYTMRIFNSDGSEPEMCGNGXRCFARFIA 666 + F KY GLGNDFIL+DNR+S P ++PEQA K+CDR+FGIGADGVIF + G +TDYTMRIFNSDGSEP+MCGNG RC ARFIA Sbjct: 3 IEFSKYQGLGNDFILIDNRSSHTPLVSPEQAIKMCDRHFGIGADGVIFVLPGTANTDYTMRIFNSDGSEPQMCGNGIRCLARFIA 87
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_CYAP4 (Diaminopimelate epimerase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=dapF PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.345e-31 Identity = 61/85 (71.76%), Postives = 68/85 (80.00%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVNDTDYTMRIFNSDGSEPEMCGNGXRCFARFIA 666 L F KY GLGNDFIL+DNRN P +TPEQA +CDR+FG+GADGVIF + +TDYTMRIFNSDGSEPEMCGNG RC ARF A Sbjct: 3 LQFTKYQGLGNDFILIDNRNEATPLLTPEQAVDICDRHFGVGADGVIFLLPATGETDYTMRIFNSDGSEPEMCGNGIRCLARFAA 87
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_ACAM1 (Diaminopimelate epimerase OS=Acaryochloris marina (strain MBIC 11017) GN=dapF PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.345e-31 Identity = 60/85 (70.59%), Postives = 71/85 (83.53%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVNDTDYTMRIFNSDGSEPEMCGNGXRCFARFIA 666 + F KY GLGNDFIL+DNR+ +P +TP+QA ++CDRNFGIG DGVIFA+ DTDYTMRI+NSDGSEPEMCGNG RC ARF+A Sbjct: 3 VEFTKYQGLGNDFILIDNRHQAQPCLTPDQAVQMCDRNFGIGGDGVIFALPPEGDTDYTMRIYNSDGSEPEMCGNGIRCLARFLA 87
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_MICAN (Diaminopimelate epimerase OS=Microcystis aeruginosa (strain NIES-843) GN=dapF PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.294e-31 Identity = 63/83 (75.90%), Postives = 70/83 (84.34%), Query Frame = 1 Query: 418 FVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVNDTDYTMRIFNSDGSEPEMCGNGXRCFARFIA 666 F KY GLGNDFIL+DNR+S EP IT E A +CDR+FGIGADGVIFA+ G +TDYTMRIFNSDGSEPEMCGNG RC A+FIA Sbjct: 5 FTKYQGLGNDFILIDNRHSPEPLITAEMAVAMCDRHFGIGADGVIFALPGQAETDYTMRIFNSDGSEPEMCGNGIRCLAQFIA 87
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_SYNJA (Diaminopimelate epimerase OS=Synechococcus sp. (strain JA-3-3Ab) GN=dapF PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.625e-27 Identity = 55/84 (65.48%), Postives = 66/84 (78.57%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVNDTDYTMRIFNSDGSEPEMCGNGXRCFARFI 663 L F KY GLGNDFILVDNR+ +P +TPE+A LC+R FG+GADGVIF + G D++MR+FNSDGSE EMCGNG RC ARF+ Sbjct: 5 LSFHKYQGLGNDFILVDNRHQPQPCLTPEEAVALCNRRFGVGADGVIFLLPGQEGADFSMRLFNSDGSEAEMCGNGIRCLARFL 88
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_SYNJB (Diaminopimelate epimerase OS=Synechococcus sp. GN=dapF PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.701e-26 Identity = 54/84 (64.29%), Postives = 66/84 (78.57%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVNDTDYTMRIFNSDGSEPEMCGNGXRCFARFI 663 L F KY GLGNDFILVDNR ++P ++PE+A LC+R FG+GADGVIF + G D++MR+FNSDGSE EMCGNG RC ARF+ Sbjct: 5 LSFHKYQGLGNDFILVDNRWQSQPCLSPEEAVALCNRRFGVGADGVIFLLPGQEGADFSMRLFNSDGSEAEMCGNGIRCLARFL 88
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_THEEB (Diaminopimelate epimerase OS=Thermosynechococcus elongatus (strain BP-1) GN=dapF PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.465e-26 Identity = 51/84 (60.71%), Postives = 66/84 (78.57%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVNDTDYTMRIFNSDGSEPEMCGNGXRCFARFI 663 L F KY GLGNDF+L+DNR+ E +TPEQA+ CDR+FG+GADGVIF + G ++DY MR++N+DGS +MCGNG RC A+FI Sbjct: 3 LSFQKYQGLGNDFLLIDNRHQEELLLTPEQAQFWCDRHFGVGADGVIFLLRGTGESDYRMRMYNADGSVAQMCGNGIRCLAKFI 86
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_MOOTA (Diaminopimelate epimerase OS=Moorella thermoacetica (strain ATCC 39073) GN=dapF PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.068e-20 Identity = 48/84 (57.14%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVNDTDYTMRIFNSDGSEPEMCGNGXRCFARFI 663 +HFVK HGLGNDF+LV+ P P A ++C R FGIGADG+I +L MRIFN DGSEPEMCGNG RCFAR++ Sbjct: 1 MHFVKMHGLGNDFVLVNAMTEKVPGDLPGLARRVCHRRFGIGADGLIL-VLPSEQARLRMRIFNPDGSEPEMCGNGIRCFARYV 83
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_PROMM (Diaminopimelate epimerase OS=Prochlorococcus marinus (strain MIT 9313) GN=dapF PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.108e-20 Identity = 50/89 (56.18%), Postives = 61/89 (68.54%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNS--TEPRITPEQA--EKLCDRNFGIGADGVIFAMLGVNDTDYTMRIFNSDGSEPEMCGNGXRCFARFIA 666 L F KY GLGNDF+L+D R T+ I P+ A K+CDR+FGIGADG+I A+ D D M+IFN+DGS EMCGNG RC RF+A Sbjct: 5 LQFSKYQGLGNDFLLIDGREDQLTQQVINPDPAWVRKICDRHFGIGADGLILALPPRADGDLRMQIFNADGSLAEMCGNGIRCLTRFLA 93 The following BLAST results are available for this feature:
BLAST of FC876353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 275
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876353 ID=FC876353; Name=FC876353; organism=Citrus clementina; type=EST; length=666bpback to top |