FC876353
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_CORA7 (Diaminopimelate epimerase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=dapF PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.874e-11 Identity = 40/99 (40.40%), Postives = 53/99 (53.54%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAML---------------GVNDTDYTMRIFNSDGSEPEMCGNGXRCFARFI 663 + F K HG NDF++V+ T P + PE+ LCDR GIGADGV+ + G+N D+ M N+DGS EMCGNG R FA ++ Sbjct: 1 MKFAKGHGTENDFVIVEG---TGP-LPPEKVVALCDRRAGIGADGVLRIIRAGELLASGEIDELAPGINADDWFMDYRNADGSVAEMCGNGTRVFAHWV 95
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_BAUCH (Diaminopimelate epimerase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=dapF PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.874e-11 Identity = 35/85 (41.18%), Postives = 51/85 (60.00%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVN-DTDYTMRIFNSDGSEPEMCGNGXRCFARFI 663 + F K HGLGNDF++VD ++P + L +R+ G+G D ++F + + D+ RIFN+DGSE CGNG RC A F+ Sbjct: 1 MQFSKMHGLGNDFMVVDVVTQNV-YLSPTKIRFLANRHSGVGFDQLLFVEPPYDPEIDFHYRIFNADGSEVTQCGNGARCLAHFV 84
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_BACHD (Diaminopimelate epimerase OS=Bacillus halodurans GN=dapF PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.874e-11 Identity = 36/84 (42.86%), Postives = 50/84 (59.52%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDN-RNSTEPRITPEQAEKLCDRNFGIGADGVIFAMLGVNDTDYTMRIFNSDGSEPEMCGNGXRCFARF 660 + F K HGLGN +I VD + + P A + D+N GIG+DG+I + + MR+FN+DGSE + CGNG RC A+F Sbjct: 1 MKFTKMHGLGNSYIYVDCFKELLKEEELPALAVAVADKNKGIGSDGMIL-ICPSDRAPVKMRVFNNDGSEAKNCGNGLRCVAKF 83
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_GEOKA (Diaminopimelate epimerase OS=Geobacillus kaustophilus GN=dapF PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.672e-11 Identity = 38/82 (46.34%), Postives = 47/82 (57.32%), Query Frame = 1 Query: 418 FVKYHGLGNDFILVDNRNSTEPRIT-PEQAEKLCDRNFGIGADGVIFAMLGVNDTDYTMRIFNSDGSEPEMCGNGXRCFARF 660 F K HGLGN +I VD T P P A + D + GIG+DG+I + MRIFNSDGSE + CGNG RC A++ Sbjct: 6 FTKMHGLGNSYIYVDLFRETLPEEELPAIARSVADVHTGIGSDGLIL-ICPSEKAPVKMRIFNSDGSEGKNCGNGLRCVAKY 86
BLAST of FC876353 vs. ExPASy Swiss-Prot
Match: DAPF_AQUAE (Diaminopimelate epimerase OS=Aquifex aeolicus GN=dapF PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.672e-11 Identity = 36/91 (39.56%), Postives = 49/91 (53.85%), Query Frame = 1 Query: 412 LHFVKYHGLGNDFILVDNRNSTEPRITPEQA-------EKLCDRNFGIGADGVIFAMLGVN-DTDYTMRIFNSDGSEPEMCGNGXRCFARF 660 + F K G GNDF+++D+R+ E+ K+C + G+GADG+I N + D+ FNSDGS EMCGNG RC RF Sbjct: 1 MEFWKLQGSGNDFVVIDDRDEKLESFLKERGVSKEDFVRKVCAFHTGVGADGLILIKNPDNPENDFKWEFFNSDGSVAEMCGNGSRCAVRF 91 The following BLAST results are available for this feature:
BLAST of FC876353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 275
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876353 ID=FC876353; Name=FC876353; organism=Citrus clementina; type=EST; length=666bpback to top |