FC876354

Overview
NameFC876354
Unique NameFC876354
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length490
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15423 contig Ccv1_Contig15423:542..1031. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.220e-36
Identity = 74/143 (51.75%), Postives = 95/143 (66.43%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            DK    LSI D GIGMTK DL+ NLGTIA+SGT  F+E +    D+++IGQFGVGFYS YLVA+ V V +KHNDD+QYVWES+A G+F ++ DT  E LGRGT+I L+L+D+                   FI++PI +W  K
Sbjct:   71 DKASNTLSIIDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLIKKHSEFISYPISLWTEK 213          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 1.593e-36
Identity = 73/143 (51.05%), Postives = 95/143 (66.43%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            DK    LSI D G+GMTK DL+ NLGTIA+SGT  F+E +    D+++IGQFGVGFYS YLVA+ V V +KHNDD+QYVWES+A G+F ++ DT  E LGRGT+I L+L+D+                   FI++PI +W  K
Sbjct:   71 DKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLWTEK 213          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.593e-36
Identity = 73/143 (51.05%), Postives = 95/143 (66.43%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            DK    LSI D G+GMTK DL+ NLGTIA+SGT  F+E +    D+++IGQFGVGFYS YLVA+ V V +KHNDD+QYVWES+A G+F ++ DT  E LGRGT+I L+L+D+                   FI++PI +W  K
Sbjct:   71 DKASNTLSIIDSGVGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLWTEK 213          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP90_PODAN (Heat shock protein 90 homolog OS=Podospora anserina GN=MOD-E PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.081e-36
Identity = 76/143 (53.15%), Postives = 95/143 (66.43%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            DKE K L+I+D GIGMTK DL+ NLGTIA+SGT  F+E +    D+++IGQFGVGFYS YLVAD V V+SK+NDD+QY+WES A G F IS D     +GRGT+I LHL+DE                   FI++PIY+   K
Sbjct:   68 DKENKTLTIQDTGIGMTKADLVNNLGTIARSGTKQFMEALTAGADISMIGQFGVGFYSAYLVADRVTVVSKNNDDEQYIWESSAGGTFNISPDN-GPSIGRGTKIILHLKDEQTDYLNESKIKEVIKKHSEFISYPIYLHVQK 209          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.081e-36
Identity = 72/143 (50.35%), Postives = 95/143 (66.43%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            DK  K LSI D G+GM K DL+ NLGTIA+SGT  F+E +Q   D+++IGQFGVGFYS YLVA+ V V +KHNDD+QY+WES+A G+F ++ D   E LGRGT+I L L+++                   FI++PIY+W  K
Sbjct:   75 DKTNKTLSIIDSGVGMAKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVTRDVDGEQLGRGTKITLFLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEK 217          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP90_SCHPO (Heat shock protein 90 homolog OS=Schizosaccharomyces pombe GN=swo1 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 2.718e-36
Identity = 75/139 (53.96%), Postives = 95/139 (68.35%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYI 420
            DKE KILSIRD GIGMTK DLI NLG IAKSGT  F+E   +  D+++IGQFGVGFYS YLVAD V+V+SKHNDD+QY+WES A G+F ++ DT    L RGTEI+L ++++                   FI++PI +
Sbjct:   70 DKENKILSIRDTGIGMTKNDLINNLGVIAKSGTKQFMEAAASGADISMIGQFGVGFYSAYLVADKVQVVSKHNDDEQYIWESSAGGSFTVTLDTDGPRLLRGTEIRLFMKEDQLQYLEEKTIKDTVKKHSEFISYPIQL 208          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HS90A_RAT (Heat shock protein HSP 90-alpha OS=Rattus norvegicus GN=Hsp90aa1 PE=1 SV=3)

HSP 1 Score: 150.599 bits (379), Expect = 3.550e-36
Identity = 74/143 (51.75%), Postives = 97/143 (67.83%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  DT  EP+GRGT++ LHL+++                   FI +PI ++  K
Sbjct:   83 NKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 224          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HS90A_PIG (Heat shock protein HSP 90-alpha OS=Sus scrofa GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 150.599 bits (379), Expect = 3.550e-36
Identity = 74/143 (51.75%), Postives = 97/143 (67.83%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  DT  EP+GRGT++ LHL+++                   FI +PI ++  K
Sbjct:   83 NKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 224          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HS90A_MACFA (Heat shock protein HSP 90-alpha OS=Macaca fascicularis GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 150.599 bits (379), Expect = 3.550e-36
Identity = 74/143 (51.75%), Postives = 97/143 (67.83%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  DT  EP+GRGT++ LHL+++                   FI +PI ++  K
Sbjct:   83 NKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 224          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HS90A_HUMAN (Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5)

HSP 1 Score: 150.599 bits (379), Expect = 3.550e-36
Identity = 74/143 (51.75%), Postives = 97/143 (67.83%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  DT  EP+GRGT++ LHL+++                   FI +PI ++  K
Sbjct:   83 NKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 224          
The following BLAST results are available for this feature:
BLAST of FC876354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 377
Match NameE-valueIdentityDescription
HSP81_ORYSI1.220e-3651.75Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP83_ORYSJ1.593e-3651.05Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ1.593e-3651.05Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP90_PODAN2.081e-3653.15Heat shock protein 90 homolog OS=Podospora anserin... [more]
HSP83_IPONI2.081e-3650.35Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP90_SCHPO2.718e-3653.96Heat shock protein 90 homolog OS=Schizosaccharomyc... [more]
HS90A_RAT3.550e-3651.75Heat shock protein HSP 90-alpha OS=Rattus norvegic... [more]
HS90A_PIG3.550e-3651.75Heat shock protein HSP 90-alpha OS=Sus scrofa GN=H... [more]
HS90A_MACFA3.550e-3651.75Heat shock protein HSP 90-alpha OS=Macaca fascicul... [more]
HS90A_HUMAN3.550e-3651.75Heat shock protein HSP 90-alpha OS=Homo sapiens GN... [more]

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Properties
Property NameValue
Genbank descriptionC32003G08EF DevOvary1 Citrus clementina cDNA clone C32003G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876354 ID=FC876354; Name=FC876354; organism=Citrus clementina; type=EST; length=490bp
CTAGACAAAGAGAAGAAAATTCTTTCAATTCGTGACAGAGGTATTGGTAT
GACGAAGGAGGATTTAATCAAGAACTTGGGAACCATTGCAAAATCTGGAA
CATCAGCATTTGTTGAGAAAATGCAGACTAGCGGTGACCTCAATCTTATT
GGGCAATTTGGTGTTGGCTTTTACTCTGTATATCTTGTTGCTGACTATGT
TGAAGTCATTAGCAAACATAATGATGACAAACAGTATGTATGGGAATCAA
AGGCTGATGGAGCATTTGCAATTTCTGAGGACACATGGAATGAGCCACTA
GGACGAGGAACCGAGATTAAATTGCACCTCAGAGATGAAGCTGGGGAGTA
CTTGGAAGAGAGCAAGTTGAAGGAGTTGGTGAAGAAATATTCTGAATTTA
TCAACTTCCCCATCTATATCTGGGCCAGCAAAGAGGTTGATGTGGATGTT
CCTGCTGACGAGGATGACTCAAGTGATGAAGAGGAGAAAG
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