FC876354

Overview
NameFC876354
Unique NameFC876354
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length490
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HS90A_HORSE (Heat shock protein HSP 90-alpha (Fragment) OS=Equus caballus GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 3.550e-36
Identity = 74/143 (51.75%), Postives = 97/143 (67.83%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  DT  EP+GRGT++ LHL+++                   FI +PI ++  K
Sbjct:   72 NKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 213          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HS90A_BOVIN (Heat shock protein HSP 90-alpha OS=Bos taurus GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 150.599 bits (379), Expect = 3.550e-36
Identity = 74/143 (51.75%), Postives = 97/143 (67.83%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  DT  EP+GRGT++ LHL+++                   FI +PI ++  K
Sbjct:   83 NKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 224          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HS90A_MOUSE (Heat shock protein HSP 90-alpha OS=Mus musculus GN=Hsp90aa1 PE=1 SV=4)

HSP 1 Score: 150.214 bits (378), Expect = 4.636e-36
Identity = 74/142 (52.11%), Postives = 96/142 (67.61%), Query Frame = 1
Query:    7 KEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  DT  EP+GRGT++ LHL+++                   FI +PI ++  K
Sbjct:   84 KQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 224          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP82_ASHGO (Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP82 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 6.055e-36
Identity = 72/141 (51.06%), Postives = 98/141 (69.50%), Query Frame = 1
Query:   10 EKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            E+K+L IRD GIGMTK +LI NLGTIAKSGT AF+E +    D+++IGQFGVGFYS++LVAD V+VISKHNDD+QY+WES A G+F ++ D  NE +GRGT ++L L+++                   F+ +PI +  +K
Sbjct:   72 EEKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKHNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKEDQLEYLEEKRIKEVVKRHSEFVAYPIQLLVTK 212          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HS90A_CRIGR (Heat shock protein HSP 90-alpha OS=Cricetulus griseus GN=HSP90AA1 PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 7.908e-36
Identity = 73/143 (51.05%), Postives = 97/143 (67.83%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFY+ YLVA+ V VI+KHNDD+QY WES A G+F +  DT  EP+GRGT++ LHL+++                   FI +PI ++  K
Sbjct:   83 NKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYTAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVILHLKEDQTEYMEERRIKEIVKKHSQFIGYPITLFVEK 224          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.033e-35
Identity = 72/143 (50.35%), Postives = 95/143 (66.43%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            DK    L+I D GIGMTK DL+ NLGTIA+SGT  F+E +    D+++IGQFGVGFYS YLVAD V V +KHNDD+QYVWES+A G+F ++ DT  E LGRGT++ L+L+++                   FI++PI +W  K
Sbjct:   70 DKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVADKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEALGRGTKMVLYLKEDQMEYIEERRLKDLVKKHSEFISYPISLWIEK 212          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP82_ARATH (Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.349e-35
Identity = 72/143 (50.35%), Postives = 95/143 (66.43%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            DK    L+I D GIGMTK DL+ NLGTIA+SGT  F+E +    D+++IGQFGVGFYS YLVAD V V +KHNDD+QYVWES+A G+F ++ DT  E LGRGT++ L+L+++                   FI++PI +W  K
Sbjct:   70 DKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVADKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGETLGRGTKMVLYLKEDQLEYLEERRLKDLVKKHSEFISYPISLWIEK 212          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: H90A1_DANRE (Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=2 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 1.349e-35
Identity = 72/143 (50.35%), Postives = 98/143 (68.53%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            D++++ L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YLVA+ V VI+KHNDD+QY+WES A G+F +  D + E +GRGT++ LHL+++                   FI +PI ++  K
Sbjct:   80 DQKERTLTIIDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYIWESAAGGSFTVKPD-FGESIGRGTKVILHLKEDQSEYVEEKRIKEVVKKHSQFIGYPITLYIEK 221          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.301e-35
Identity = 73/143 (51.05%), Postives = 96/143 (67.13%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            +K+ + L+I D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  DT  EP+GRGT++  HL+++                   FI +PI ++  K
Sbjct:   83 NKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDT-GEPMGRGTKVIPHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEK 224          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP90_THEPA (Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 3.005e-35
Identity = 74/143 (51.75%), Postives = 92/143 (64.34%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            DK    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YLVAD V V+SK+N D QYVWES A G F + +D  +EPL RGT + LHL+++                   FI+FPI +   K
Sbjct:   76 DKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMSMIGQFGVGFYSAYLVADKVTVVSKNNADDQYVWESTASGHFTVKKDDSHEPLKRGTRLILHLKEDQTEYLEERRLKELVKKHSEFISFPISLSVEK 218          
The following BLAST results are available for this feature:
BLAST of FC876354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 377
Match NameE-valueIdentityDescription
HS90A_HORSE3.550e-3651.75Heat shock protein HSP 90-alpha (Fragment) OS=Equu... [more]
HS90A_BOVIN3.550e-3651.75Heat shock protein HSP 90-alpha OS=Bos taurus GN=H... [more]
HS90A_MOUSE4.636e-3652.11Heat shock protein HSP 90-alpha OS=Mus musculus GN... [more]
HSP82_ASHGO6.055e-3651.06Heat shock protein HSP82 OS=Ashbya gossypii GN=HSP... [more]
HS90A_CRIGR7.908e-3651.05Heat shock protein HSP 90-alpha OS=Cricetulus gris... [more]
HSP83_ARATH1.033e-3550.35Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]
HSP82_ARATH1.349e-3550.35Heat shock protein 81-2 OS=Arabidopsis thaliana GN... [more]
H90A1_DANRE1.349e-3550.35Heat shock protein HSP 90-alpha 1 OS=Danio rerio G... [more]
HS90A_PANTR2.301e-3551.05Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]
HSP90_THEPA3.005e-3551.75Heat shock protein 90 OS=Theileria parva GN=TP02_0... [more]

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Properties
Property NameValue
Genbank descriptionC32003G08EF DevOvary1 Citrus clementina cDNA clone C32003G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876354 ID=FC876354; Name=FC876354; organism=Citrus clementina; type=EST; length=490bp
CTAGACAAAGAGAAGAAAATTCTTTCAATTCGTGACAGAGGTATTGGTAT
GACGAAGGAGGATTTAATCAAGAACTTGGGAACCATTGCAAAATCTGGAA
CATCAGCATTTGTTGAGAAAATGCAGACTAGCGGTGACCTCAATCTTATT
GGGCAATTTGGTGTTGGCTTTTACTCTGTATATCTTGTTGCTGACTATGT
TGAAGTCATTAGCAAACATAATGATGACAAACAGTATGTATGGGAATCAA
AGGCTGATGGAGCATTTGCAATTTCTGAGGACACATGGAATGAGCCACTA
GGACGAGGAACCGAGATTAAATTGCACCTCAGAGATGAAGCTGGGGAGTA
CTTGGAAGAGAGCAAGTTGAAGGAGTTGGTGAAGAAATATTCTGAATTTA
TCAACTTCCCCATCTATATCTGGGCCAGCAAAGAGGTTGATGTGGATGTT
CCTGCTGACGAGGATGACTCAAGTGATGAAGAGGAGAAAG
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