FC876354

Overview
NameFC876354
Unique NameFC876354
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length490
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15423 contig Ccv1_Contig15423:542..1031. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP90_THEAN (Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.005e-35
Identity = 74/143 (51.75%), Postives = 91/143 (63.64%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            DK    L+I D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YLVAD V V+SK+N D QYVWES A G F +  D  +EPL RGT + LHL+++                   FI+FPI +   K
Sbjct:   76 DKNNNTLTIEDSGIGMTKADLVNNLGTIAKSGTRAFMEALQAGSDMSMIGQFGVGFYSAYLVADKVTVVSKNNADDQYVWESSASGHFTVKRDDSHEPLKRGTRLILHLKEDQTEYLEERRLKELVKKHSEFISFPISLSVEK 218          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP82_YEAST (ATP-dependent molecular chaperone HSP82 OS=Saccharomyces cerevisiae GN=HSP82 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.005e-35
Identity = 72/141 (51.06%), Postives = 97/141 (68.79%), Query Frame = 1
Query:   10 EKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            E+K+L IRD GIGMTK +LI NLGTIAKSGT AF+E +    D+++IGQFGVGFYS++LVAD V+VISK NDD+QY+WES A G+F ++ D  NE +GRGT ++L L+D+                   F+ +PI +  +K
Sbjct:   71 EQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTK 211          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSC82_YEAST (ATP-dependent molecular chaperone HSC82 OS=Saccharomyces cerevisiae GN=HSC82 PE=1 SV=4)

HSP 1 Score: 147.517 bits (371), Expect = 3.005e-35
Identity = 71/141 (50.35%), Postives = 98/141 (69.50%), Query Frame = 1
Query:   10 EKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            E+K+L IRD GIGMTK +LI NLGTIAKSGT AF+E +    D+++IGQFGVGFYS++LVAD V+VISK+N+D+QY+WES A G+F ++ D  NE +GRGT ++L L+D+                   F+ +PI +  +K
Sbjct:   71 EEKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKNNEDEQYIWESNAGGSFTVTLDEVNERIGRGTVLRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLLVTK 211          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 3.925e-35
Identity = 71/143 (49.65%), Postives = 95/143 (66.43%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            DK    L+I D GIGMTK DL+ NLGTIA+SGT  F+E +    D+++IGQFGVGFYS YLVA+ V V +KHNDD+QYVWES+A G+F ++ DT  E LGRGT++ L+L+++                   FI++PI +W  K
Sbjct:   70 DKANNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGENLGRGTKMVLYLKEDQLEYLEERRLKDLIKKHSEFISYPISLWVEK 212          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HS90B_DANRE (Heat shock protein HSP 90-beta OS=Danio rerio GN=hsp90ab1 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 8.744e-35
Identity = 71/141 (50.35%), Postives = 95/141 (67.38%), Query Frame = 1
Query:   10 EKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            +++ L++ D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  D   EP+GRGT++ LHL+++                   FI +PI ++  K
Sbjct:   79 QERTLTLIDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVKVD-HGEPIGRGTKVILHLKEDQTEYIEEKRVKEVVKKHSQFIGYPITLYVEK 218          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: ENPL_CHICK (Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 8.744e-35
Identity = 79/148 (53.38%), Postives = 96/148 (64.86%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGD-----LNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            DKEK +L + D GIGMTKE+LIKNLGTIAKSGTS F+ KM    D       LIGQFGVGFYS +LVAD V V SKHN+D Q++WES ++  F++ +D     LGRGT I L L++EA                  FINFPIY+W+SK
Sbjct:  138 DKEKNMLHVTDTGIGMTKEELIKNLGTIAKSGTSEFLNKMTEMQDDSQSTSELIGQFGVGFYSAFLVADRVIVTSKHNNDTQHIWESDSN-EFSVIDDPRGNTLGRGTTITLVLKEEASDYLELDTVKNLVKKYSQFINFPIYVWSSK 284          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 1.142e-34
Identity = 74/143 (51.75%), Postives = 95/143 (66.43%), Query Frame = 1
Query:    4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            +KE   L++ D GIGMTK DL+ NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YLVAD V V SK+NDD+QYVWES A G+F +  D+  EPLGRGT+I LH++++                   FI +PI +   K
Sbjct:   73 NKEAGTLTLIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVADKVVVTSKNNDDEQYVWESSAGGSFTVRPDS-GEPLGRGTKIVLHIKEDQLEYLEESKIKQIVNKHSQFIGYPIKLLVEK 214          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: ENPL_DICDI (Endoplasmin homolog OS=Dictyostelium discoideum GN=grp94 PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 1.142e-34
Identity = 71/145 (48.97%), Postives = 97/145 (66.90%), Query Frame = 1
Query:    1 LDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDL-NLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            +DK   +L I DRG+GMTK++L++NLGTIA+SGT  F++K+  S +  NLIGQFGVGFYS++LVAD V V SK NDD QYVW S +  ++ I++D     LGRGT I LH++D++                  FINFPIY++ S+
Sbjct:  116 IDKANNVLHITDRGVGMTKDELVRNLGTIAQSGTKEFIKKVSDSAESSNLIGQFGVGFYSLFLVADSVVVTSKSNDDDQYVWTSDSQSSYTIAKDPKGNTLGRGTRISLHIKDDSKEFLDQEVIKQLVKKYSQFINFPIYLYVSE 260          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HS90B_RAT (Heat shock protein HSP 90-beta OS=Rattus norvegicus GN=Hsp90ab1 PE=1 SV=4)

HSP 1 Score: 145.206 bits (365), Expect = 1.491e-34
Identity = 71/141 (50.35%), Postives = 95/141 (67.38%), Query Frame = 1
Query:   10 EKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            +++ L++ D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  D   EP+GRGT++ LHL+++                   FI +PI ++  K
Sbjct:   80 QERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK 219          
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HS90B_PONAB (Heat shock protein HSP 90-beta OS=Pongo abelii GN=HSP90AB1 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.491e-34
Identity = 71/141 (50.35%), Postives = 95/141 (67.38%), Query Frame = 1
Query:   10 EKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWASK 432
            +++ L++ D GIGMTK DLI NLGTIAKSGT AF+E +Q   D+++IGQFGVGFYS YLVA+ V VI+KHNDD+QY WES A G+F +  D   EP+GRGT++ LHL+++                   FI +PI ++  K
Sbjct:   80 QERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEYLEERRVKEVVKKHSQFIGYPITLYLEK 219          
The following BLAST results are available for this feature:
BLAST of FC876354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 377
Match NameE-valueIdentityDescription
HSP90_THEAN3.005e-3551.75Heat shock protein 90 OS=Theileria annulata GN=TA1... [more]
HSP82_YEAST3.005e-3551.06ATP-dependent molecular chaperone HSP82 OS=Sacchar... [more]
HSC82_YEAST3.005e-3550.35ATP-dependent molecular chaperone HSC82 OS=Sacchar... [more]
HSP80_SOLLC3.925e-3549.65Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HS90B_DANRE8.744e-3550.35Heat shock protein HSP 90-beta OS=Danio rerio GN=h... [more]
ENPL_CHICK8.744e-3553.38Endoplasmin OS=Gallus gallus GN=HSP90B1 PE=1 SV=1[more]
HSP83_ANOGA1.142e-3451.75Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8... [more]
ENPL_DICDI1.142e-3448.97Endoplasmin homolog OS=Dictyostelium discoideum GN... [more]
HS90B_RAT1.491e-3450.35Heat shock protein HSP 90-beta OS=Rattus norvegicu... [more]
HS90B_PONAB1.491e-3450.35Heat shock protein HSP 90-beta OS=Pongo abelii GN=... [more]

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Properties
Property NameValue
Genbank descriptionC32003G08EF DevOvary1 Citrus clementina cDNA clone C32003G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876354 ID=FC876354; Name=FC876354; organism=Citrus clementina; type=EST; length=490bp
CTAGACAAAGAGAAGAAAATTCTTTCAATTCGTGACAGAGGTATTGGTAT
GACGAAGGAGGATTTAATCAAGAACTTGGGAACCATTGCAAAATCTGGAA
CATCAGCATTTGTTGAGAAAATGCAGACTAGCGGTGACCTCAATCTTATT
GGGCAATTTGGTGTTGGCTTTTACTCTGTATATCTTGTTGCTGACTATGT
TGAAGTCATTAGCAAACATAATGATGACAAACAGTATGTATGGGAATCAA
AGGCTGATGGAGCATTTGCAATTTCTGAGGACACATGGAATGAGCCACTA
GGACGAGGAACCGAGATTAAATTGCACCTCAGAGATGAAGCTGGGGAGTA
CTTGGAAGAGAGCAAGTTGAAGGAGTTGGTGAAGAAATATTCTGAATTTA
TCAACTTCCCCATCTATATCTGGGCCAGCAAAGAGGTTGATGTGGATGTT
CCTGCTGACGAGGATGACTCAAGTGATGAAGAGGAGAAAG
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