FC876354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: TRAP1_RAT (Heat shock protein 75 kDa, mitochondrial OS=Rattus norvegicus GN=Trap1 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 7.678e-23 Identity = 59/143 (41.26%), Postives = 85/143 (59.44%), Query Frame = 1 Query: 4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLN--LIGQFGVGFYSVYLVADYVEVISK--HNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYI 420 D EK ++I+D GIGMTKE+L+ NLGTIA+SG+ AF+E +Q + + +IGQFGVGFYS ++VAD VEV S+ + Y W S G F I+E + P GT+I +HL+ + F++FP+Y+ Sbjct: 150 DAEKGTITIQDTGIGMTKEELVSNLGTIARSGSKAFLEALQHQAETSSRIIGQFGVGFYSAFMVADKVEVYSRPAAPESPGYQWLSDGSGVFEIAEASGVRP---GTKIIIHLKSDCKDFANESRVQDVVTKYSNFVSFPLYL 289
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HTPG_SHESW (Chaperone protein htpG OS=Shewanella sp. (strain W3-18-1) GN=htpG PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 7.678e-23 Identity = 59/145 (40.69%), Postives = 85/145 (58.62%), Query Frame = 1 Query: 4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLVADYVEVISK---HNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIW 423 DK+K ++I D G+GMT++ +I++LGTIAKSGT+ F + + + S D LIGQFGVGFYS ++VA V V ++ H D+ +WES+ +G+F + T RGTEI LHLRDE I+ P+ +W Sbjct: 70 DKDKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEGSFTVETIT---KASRGTEITLHLRDEEKEFADDWRLRSIITKYSDHISVPVEMW 211
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HTPG_SHEPC (Chaperone protein htpG OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=htpG PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 7.678e-23 Identity = 59/145 (40.69%), Postives = 85/145 (58.62%), Query Frame = 1 Query: 4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLVADYVEVISK---HNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIW 423 DK+K ++I D G+GMT++ +I++LGTIAKSGT+ F + + + S D LIGQFGVGFYS ++VA V V ++ H D+ +WES+ +G+F + T RGTEI LHLRDE I+ P+ +W Sbjct: 70 DKDKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTAEFFKNLSGEASKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEGSFTVETIT---KASRGTEITLHLRDEEKEFADDWRLRSIITKYSDHISVPVEMW 211
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB9 (Chaperone protein htpG OS=Shewanella baltica (strain OS195) GN=htpG PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 7.678e-23 Identity = 60/145 (41.38%), Postives = 85/145 (58.62%), Query Frame = 1 Query: 4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLVADYVEVISK---HNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIW 423 DKEK ++I D G+GMT++ +I++LGTIAKSGT+ F + + ++S D LIGQFGVGFYS ++VA V V ++ H D+ +WES+ +G F + T RGTEI LHLRDE I+ P+ +W Sbjct: 70 DKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTADFFKNLSGESSKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEGNFTVDTIT---KASRGTEITLHLRDEEKEFADDWRLRSIITKYSDHISVPVEMW 211
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB8 (Chaperone protein htpG OS=Shewanella baltica (strain OS185) GN=htpG PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 7.678e-23 Identity = 60/145 (41.38%), Postives = 85/145 (58.62%), Query Frame = 1 Query: 4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLVADYVEVISK---HNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIW 423 DKEK ++I D G+GMT++ +I++LGTIAKSGT+ F + + ++S D LIGQFGVGFYS ++VA V V ++ H D+ +WES+ +G F + T RGTEI LHLRDE I+ P+ +W Sbjct: 70 DKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTADFFKNLSGESSKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEGNFTVDTIT---KASRGTEITLHLRDEEKEFADDWRLRSIITKYSDHISVPVEMW 211
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HTPG_SHEB5 (Chaperone protein htpG OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=htpG PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 7.678e-23 Identity = 60/145 (41.38%), Postives = 85/145 (58.62%), Query Frame = 1 Query: 4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLVADYVEVISK---HNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIW 423 DKEK ++I D G+GMT++ +I++LGTIAKSGT+ F + + ++S D LIGQFGVGFYS ++VA V V ++ H D+ +WES+ +G F + T RGTEI LHLRDE I+ P+ +W Sbjct: 70 DKEKGTVTIEDNGVGMTRDGVIEHLGTIAKSGTADFFKNLSGESSKDSQLIGQFGVGFYSAFIVAKKVTVRTRAAGHKADEAVLWESEGEGNFTVDTIT---KASRGTEITLHLRDEEKEFADDWRLRSIITKYSDHISVPVEMW 211
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HTPG_RICCN (Chaperone protein htpG OS=Rickettsia conorii GN=htpG PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.003e-22 Identity = 57/116 (49.14%), Postives = 81/116 (69.83%), Query Frame = 1 Query: 1 LDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLVADYVEVIS-KHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDE 339 +DK+ + + IRD GIGM K+DLI+NLGTIA+SGT+ F++ + + D LIGQFGVGFYS ++VAD V V S K +DK ++WES G + +S+ ++ RGTEI LH++ E Sbjct: 68 VDKDHRQIIIRDNGIGMNKDDLIENLGTIARSGTANFLKSLSGDSKKDNMLIGQFGVGFYSSFMVADKVTVTSRKAGEDKVHIWESDGLGEYTVSDS--DKEFTRGTEIVLHIKKE 181
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HTPG_YERPS (Chaperone protein htpG OS=Yersinia pseudotuberculosis GN=htpG PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.310e-22 Identity = 59/116 (50.86%), Postives = 79/116 (68.10%), Query Frame = 1 Query: 4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLVADYVEVISKHND---DKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRD 336 DKEK+ L++ D GIGMT++++I NLGTIAKSGT AF+E + + D LIGQFGVGFYS ++VAD V V ++ D WES +G + I++ T +E RGTEI LHLR+ Sbjct: 72 DKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGAPADTGVFWESAGEGDYTIADITKDE---RGTEITLHLRE 184
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HTPG_YERPP (Chaperone protein htpG OS=Yersinia pestis (strain Pestoides F) GN=htpG PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.310e-22 Identity = 59/116 (50.86%), Postives = 79/116 (68.10%), Query Frame = 1 Query: 4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLVADYVEVISKHND---DKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRD 336 DKEK+ L++ D GIGMT++++I NLGTIAKSGT AF+E + + D LIGQFGVGFYS ++VAD V V ++ D WES +G + I++ T +E RGTEI LHLR+ Sbjct: 72 DKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGAPADTGVFWESAGEGDYTIADITKDE---RGTEITLHLRE 184
BLAST of FC876354 vs. ExPASy Swiss-Prot
Match: HTPG_YERPN (Chaperone protein htpG OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=htpG PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.310e-22 Identity = 59/116 (50.86%), Postives = 79/116 (68.10%), Query Frame = 1 Query: 4 DKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKM--QTSGDLNLIGQFGVGFYSVYLVADYVEVISKHND---DKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRD 336 DKEK+ L++ D GIGMT++++I NLGTIAKSGT AF+E + + D LIGQFGVGFYS ++VAD V V ++ D WES +G + I++ T +E RGTEI LHLR+ Sbjct: 72 DKEKRTLTLSDNGIGMTRDEVIDNLGTIAKSGTKAFLESIGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGAPADTGVFWESAGEGDYTIADITKDE---RGTEITLHLRE 184 The following BLAST results are available for this feature:
BLAST of FC876354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 377
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876354 ID=FC876354; Name=FC876354; organism=Citrus clementina; type=EST; length=490bpback to top |