FC876357
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_STRCO (Ribulose-phosphate 3-epimerase OS=Streptomyces coelicolor GN=rpe PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.088e-35 Identity = 79/161 (49.07%), Postives = 106/161 (65.84%), Query Frame = 2 Query: 143 VTAKIAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVR 625 + A+I PS+LS+DFA LA EA+ + GADWLH+D+MD HFVPNLT+G PV+ESL + T LDCHLM+ P + +AGA TFH E + L + I++KG R +ALKP T VE P + ++M+L+MTVEPGFGGQ F+ M+ K+R Sbjct: 1 MAAQINPSILSADFARLADEAKAVE--GADWLHVDVMDNHFVPNLTLGVPVVESLARATDTPLDCHLMIEAPDRWAPQYVEAGAGSVTFHAEAAAAP-VRLAREIRAKGARASMALKPATPVE---PYEDLLPELDMLLIMTVEPGFGGQAFLDIMLPKIR 155
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_MYCLE (Ribulose-phosphate 3-epimerase OS=Mycobacterium leprae GN=rpe PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.088e-35 Identity = 75/159 (47.17%), Postives = 107/159 (67.30%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 IAPS+L++DFA L EA + + ADWLH+D+MDGHFVPNLTIG PV++SL + +DCHLM+ NP + P +AGA TFH E + DN + I++ G + G+ +KPGT + P ++ + +L+M+VEPGFGGQ F+PE++ KVRT+ Sbjct: 5 IAPSILAADFARLTDEAAVVAS--ADWLHVDVMDGHFVPNLTIGLPVVQSLLAASDIPMDCHLMIDNPDRWAPPYAEAGAYNVTFHAE-ATDNPVGVAHDIRTAGAKAGIGVKPGTPLN---PYLDILPHFDTLLIMSVEPGFGGQAFIPEVLSKVRTV 157
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_RHOCA (Ribulose-phosphate 3-epimerase OS=Rhodobacter capsulatus GN=cbbE PE=3 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 7.605e-34 Identity = 75/160 (46.88%), Postives = 106/160 (66.25%), Query Frame = 2 Query: 152 KIAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 KIAPS+LS+DFA+ E + I GADW+H+D+MDGHFVPNLT G P + + RKH K +D HLM++ Y++ +AGA T HVE + + +Q I++ GM+ GVA+ PGT E + +++ A ++V VMTV PGFGGQK++ +M KVR L Sbjct: 8 KIAPSILSADFADFGREIQAIEAQGADWVHVDVMDGHFVPNLTFGPPAVAAFRKHVKTVMDVHLMISPVDAYIDAYAQAGADVLTAHVE-AGPHIHRTLQAIRAAGMKSGVAINPGTPAEAIEHVLDIA---DVVCVMTVNPGFGGQKYI-DMTAKVRKL 162
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_SYNY3 (Ribulose-phosphate 3-epimerase OS=Synechocystis sp. (strain PCC 6803) GN=rpe PE=1 SV=3) HSP 1 Score: 137.117 bits (344), Expect = 7.118e-32 Identity = 68/161 (42.24%), Postives = 103/161 (63.98%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVE-ISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPV-EMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 +APS+LS+DF+ L E + + GADW+H+D+MDG FVPN+TIG +++++R TK LD HLM+ P YVE KAGA + HVE + + + +I+ G + G L P T ++ +E PV +++L+M+V PGFGGQ F+PE++ K+R L Sbjct: 7 VAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLD----FLEYVLPVCDLILIMSVNPGFGGQSFIPEVLPKIRAL 163
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_TREPA (Ribulose-phosphate 3-epimerase OS=Treponema pallidum GN=rpe PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.753e-30 Identity = 71/162 (43.83%), Postives = 99/162 (61.11%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSV---EEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 +APS+LS+DF+ L + GA W+H+D+MDGHFVPNLT GAPV+ LR T D HLMV+ P D +E +AGA TFH+E ++ + L+ I+ +G++ G++L P T V EV P V++VLVMTV PGF GQ+ + + KV L Sbjct: 7 LAPSLLSADFSALDRALVYLEAHGAQWVHLDVMDGHFVPNLTFGAPVLRCLRSKTHLPFDVHLMVSRPADLIEDFVQAGADFLTFHIE-AEVHAHRLIHAIRGRGVKVGISLVPSTPVAALSEVLPF------VDLVLVMTVNPGFSGQQMIAHCLSKVSAL 161
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_BACSU (Ribulose-phosphate 3-epimerase OS=Bacillus subtilis GN=rpe PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.753e-30 Identity = 67/158 (42.41%), Postives = 103/158 (65.19%), Query Frame = 2 Query: 152 KIAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVR 625 K+APS+LS+DFA L +E + + GAD +H+D+MDGHFVPN+TIG ++E++R T LD HLM+ P Y+ KAGA + H E + + +Q IK +G++ GV L P T V+ + + + +++VL+MTV PGFGGQKF+ ++ K++ Sbjct: 3 KVAPSILSADFAALGNEIKDVEKGGADCIHIDVMDGHFVPNITIGPLIVEAVRPVTDLPLDVHLMIEEPDRYIPAFAKAGADILSVHAE-ACPHLHRTIQLIKEQGVKAGVVLNPHTPVQVIEHVFD---DLDLVLLMTVNPGFGGQKFIHSVLPKIK 156
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_CHLTR (Ribulose-phosphate 3-epimerase OS=Chlamydia trachomatis GN=rpe PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.939e-29 Identity = 64/165 (38.79%), Postives = 105/165 (63.64%), Query Frame = 2 Query: 131 KKMGVTAKIAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVR 625 KK GV +APS++ +D A + EA I GAD +H+D+MDGHFVPN+T G V+ ++ + T+ +L+ H M+ P ++VE KAGA H E + +N +E++ I+ G++ GVA P TS+E V + +++L+M+V PGF GQKF+P+ +++++ Sbjct: 7 KKQGVL--VAPSIMGADLACIGREARNIEESGADLIHIDVMDGHFVPNITFGPGVVAAINRSTELFLEVHAMIYTPFEFVEAFVKAGADRIIVHFE-AAENIKEIISYIQKCGVQAGVAFSPETSIEFVTSFIP---LCDVILLMSVHPGFCGQKFIPDTIERIQ 165
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_CHLMU (Ribulose-phosphate 3-epimerase OS=Chlamydia muridarum GN=rpe PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.307e-29 Identity = 64/165 (38.79%), Postives = 104/165 (63.03%), Query Frame = 2 Query: 131 KKMGVTAKIAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVR 625 KK GV IAPS++ +D A L A I GA+ +H+D+MDGHFVPN+T G +I ++ + T +L+ H M+ P ++VE KAGA H E + +N +E++ I+ G++ G+A P TS+E + + +++L+M+V+PGF GQKF+P+ ++K+R Sbjct: 2 KKQGVL--IAPSIMGADLACLGDAARNIEESGANLIHIDVMDGHFVPNITFGPGIIAAINRSTDLFLEVHAMIYTPFEFVEAFVKAGADRIIVHFE-AAENLKEILDYIRKCGVQAGIAFSPETSIEFISAFIP---LCDVILLMSVQPGFCGQKFIPDTIEKIR 160
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_HELPJ (Ribulose-phosphate 3-epimerase OS=Helicobacter pylori J99 GN=rpe PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.257e-28 Identity = 68/156 (43.59%), Postives = 101/156 (64.74%), Query Frame = 2 Query: 152 KIAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDK 619 K+APS+LS+DF +LA E E + N AD+LH+D+MDGH+VPNLT+G ++E++ + ++ LD HLMV N +VE + H E K + ++Q IKS G+ PG+ L P T E + L+E V +VL+M+V PGFGGQKF+ +++K Sbjct: 2 KVAPSLLSADFMHLAKEIESVSN--ADFLHVDVMDGHYVPNLTMGPVILENVTQMSQVPLDVHLMVENASFFVELFAPLNPQIISIHAENEK-HPHRVLQLIKSSGITPGIVLNPHTHEESIKYLLES---VGLVLLMSVNPGFGGQKFLDLVLEK 151
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: ALSE_ECOLI (D-allulose-6-phosphate 3-epimerase OS=Escherichia coli (strain K12) GN=alsE PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.641e-28 Identity = 66/160 (41.25%), Postives = 92/160 (57.50%), Query Frame = 2 Query: 152 KIAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 KI+PS++ D + E ++ AD+ H+DIMDGHFVPNLT+ + ++K LDCHLMVT P DY+ L +AGA T H E L+ I+ M+ G+ L P T VE + + A + + VMTV+PGF GQ F+PEM+DK+ L Sbjct: 2 KISPSLMCMDLLKFKEQIE-FIDSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKA---DKITVMTVDPGFAGQPFIPEMLDKLAEL 157 The following BLAST results are available for this feature:
BLAST of FC876357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876357 ID=FC876357; Name=FC876357; organism=Citrus clementina; type=EST; length=633bpback to top |