FC876357
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_SPIOL (Ribulose-phosphate 3-epimerase, chloroplastic OS=Spinacia oleracea GN=RPE PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.143e-28 Identity = 73/202 (36.14%), Postives = 113/202 (55.94%), Query Frame = 2 Query: 35 LSLRFLFSDKKSPNPCASESGRVVS*IQPKQK--KKMGVTAKIAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEI-SKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 L++R L SPN +V + ++ + K ++PS+LS++FA L + + + G DW+H+D+MDG FVPN+TIG V+++LR T LD HLM+ P V KAGA + H E+ S + V +IKS G + GV L PGT + + +++ V++VL+M+V PGFGGQ F+ + K+ L Sbjct: 22 LNIRKLQPSTSSPNSLTFTRRKVQTLVKATSRVDKFSKSDIIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCELASTIHLHRTVNQIKSLGAKAGVVLNPGTPLSTIEYVLD---VVDLVLIMSVNPGFGGQSFIESQVKKISDL 220
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_SOLTU (Ribulose-phosphate 3-epimerase, chloroplastic (Fragment) OS=Solanum tuberosum PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.143e-28 Identity = 65/160 (40.62%), Postives = 97/160 (60.62%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKD-NWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 ++PS+LS++F+ L + + I G DW+H+D+MDG FVPN+TIG V++SLR T LD HLM+ P V KAGA + H E S + + +IKS G + GV L PGT + + +++ V++VL+M+V PGFGGQ F+ + K+ L Sbjct: 59 VSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDA---VDLVLIMSVNPGFGGQSFIESQVKKISDL 215
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_RHORU (Ribulose-phosphate 3-epimerase OS=Rhodospirillum rubrum GN=cbbE PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 4.775e-28 Identity = 69/161 (42.86%), Postives = 99/161 (61.49%), Query Frame = 2 Query: 152 KIAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLD-YVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 +IAPS+LS+DFA GAD LH D+MD H+VPNLT+G V +LR HT +D HLM T P+D ++ +AGA TFH E S D+ VQ I+ +G++ GVAL P + + + ++E +++VL+M+V PGFGGQ F+P + K+ L Sbjct: 6 RIAPSLLSADFAISRPRCPSDGRTGADILHFDVMDNHYVPNLTVGPLVCAALRPHTSLPIDVHLM-TRPVDPLIDSFAEAGADMITFHPEAS-DHVHRSVQMIRKRGLKAGVALNPASPLSLLDHILE---DLDLVLIMSVNPGFGGQSFIPSALPKIAAL 161
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_SHIFL (Ribulose-phosphate 3-epimerase OS=Shigella flexneri GN=rpe PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.144e-28 Identity = 69/159 (43.40%), Postives = 102/159 (64.15%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKH-TKAYLDCHLMVTNPLDYVEP-LGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVR 625 IAPS+LS+DFA L + + L GAD +H D+MD H+VPNLTIG V++SLR + A +D HLMV P+D + P AGAS TFH E S ++ +Q IK G + G+ P T + + +++ ++++L+M+V PGFGGQ F+P+ +DK+R Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMV-KPVDRIVPDFAAAGASIITFHPEAS-EHVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMD---KLDVILLMSVNPGFGGQSFIPQTLDKLR 159
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_ECOLI (Ribulose-phosphate 3-epimerase OS=Escherichia coli (strain K12) GN=rpe PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.144e-28 Identity = 69/159 (43.40%), Postives = 102/159 (64.15%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKH-TKAYLDCHLMVTNPLDYVEP-LGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVR 625 IAPS+LS+DFA L + + L GAD +H D+MD H+VPNLTIG V++SLR + A +D HLMV P+D + P AGAS TFH E S ++ +Q IK G + G+ P T + + +++ ++++L+M+V PGFGGQ F+P+ +DK+R Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMV-KPVDRIVPDFAAAGASIITFHPEAS-EHVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMD---KLDVILLMSVNPGFGGQSFIPQTLDKLR 159
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_ECOL6 (Ribulose-phosphate 3-epimerase OS=Escherichia coli O6 GN=rpe PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.144e-28 Identity = 69/159 (43.40%), Postives = 102/159 (64.15%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKH-TKAYLDCHLMVTNPLDYVEP-LGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVR 625 IAPS+LS+DFA L + + L GAD +H D+MD H+VPNLTIG V++SLR + A +D HLMV P+D + P AGAS TFH E S ++ +Q IK G + G+ P T + + +++ ++++L+M+V PGFGGQ F+P+ +DK+R Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMV-KPVDRIVPDFAAAGASIITFHPEAS-EHVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMD---KLDVILLMSVNPGFGGQSFIPQTLDKLR 159
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_ECO57 (Ribulose-phosphate 3-epimerase OS=Escherichia coli O157:H7 GN=rpe PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.144e-28 Identity = 69/159 (43.40%), Postives = 102/159 (64.15%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKH-TKAYLDCHLMVTNPLDYVEP-LGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVR 625 IAPS+LS+DFA L + + L GAD +H D+MD H+VPNLTIG V++SLR + A +D HLMV P+D + P AGAS TFH E S ++ +Q IK G + G+ P T + + +++ ++++L+M+V PGFGGQ F+P+ +DK+R Sbjct: 6 IAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVPNLTIGPMVLKSLRNYGITAPIDVHLMV-KPVDRIVPDFAAAGASIITFHPEAS-EHVDRTLQLIKENGCKAGLVFNPATPLSYLDYVMD---KLDVILLMSVNPGFGGQSFIPQTLDKLR 159
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_HELPY (Ribulose-phosphate 3-epimerase OS=Helicobacter pylori GN=rpe PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.814e-27 Identity = 67/156 (42.95%), Postives = 100/156 (64.10%), Query Frame = 2 Query: 152 KIAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDK 619 K+APS+LS+DF +LA E E + N AD+LH+D+MDGH+VPNLT+G V+E++ + ++ LD HLMV N + E + H E K + ++Q IK+ G+ PG+ L P T E + L+E V +VL+M+V PGFGGQKF+ +++K Sbjct: 2 KVAPSLLSADFMHLAKEIESVSN--ADFLHVDVMDGHYVPNLTMGPVVLENVTQMSQVPLDVHLMVENASFFAELFAPLKPQIISIHAENEK-HPHRVLQLIKNLGITPGIVLNPHTHEESIKYLLES---VGLVLLMSVNPGFGGQKFLDLVLEK 151
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_CHLPN (Ribulose-phosphate 3-epimerase OS=Chlamydia pneumoniae GN=rpe PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.095e-27 Identity = 58/156 (37.18%), Postives = 99/156 (63.46%), Query Frame = 2 Query: 155 IAPSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKDNWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKV 622 + PS++ +D L EA+++ G+D++H+DIMDGHFVPNLT G +I ++ + T +L+ H M+ NP +++E ++GA H E S+D +EL+ IK G++ G+A P TS+E + + ++V++M+V PGF GQ F+P ++K+ Sbjct: 9 VGPSIMGADLTCLGVEAKKLEQAGSDFIHIDIMDGHFVPNLTFGPGIIAAINRSTDLFLEVHAMIYNPFEFIESFVRSGADRIIVHFEASED-IKELLSYIKKCGVQAGLAFSPDTSIEFLPSFLPFC---DVVVLMSVYPGFTGQSFLPNTIEKI 160
BLAST of FC876357 vs. ExPASy Swiss-Prot
Match: RPE_ORYSJ (Ribulose-phosphate 3-epimerase, chloroplastic OS=Oryza sativa subsp. japonica GN=RPE PE=1 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 5.279e-27 Identity = 68/197 (34.52%), Postives = 112/197 (56.85%), Query Frame = 2 Query: 74 NPCASESGRVVS*IQPKQKKKMGVTAKI----------APSMLSSDFANLASEAERILNCGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLGKAGASGFTFHVEISKD-NWQELVQRIKSKGMRPGVALKPGTSVEEVYPLVEGANPVEMVLVMTVEPGFGGQKFMPEMMDKVRTL 631 +P A+ GR ++ P++ ++ ++++ +PS+LS++F+ L + + + G DW+H+D+MDG FVPN+TIG V+++LR T LD HLM+ P V KAGA + H E S + V +IKS G + GV L P T + + +++ V++VL+M+V PGFGGQ F+ + K+ L Sbjct: 16 SPRAASLGRRLAFSSPRKAFRVRASSRVDKFSKNDIIVSPSILSANFSKLGEQVKAVEVAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTVNQIKSLGAKAGVVLNPATPLTAIDYVLD---VVDLVLIMSVNPGFGGQSFIESQVKKIAEL 209 The following BLAST results are available for this feature:
BLAST of FC876357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876357 ID=FC876357; Name=FC876357; organism=Citrus clementina; type=EST; length=633bpback to top |