FC876358
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876358 vs. ExPASy Swiss-Prot
Match: UBL1_SCHPO (Ubiquitin-like protein 1 OS=Schizosaccharomyces pombe GN=ubl1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.431e-17 Identity = 40/76 (52.63%), Postives = 56/76 (73.68%), Query Frame = 2 Query: 68 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 295 M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76 HSP 2 Score: 85.8853 bits (211), Expect = 2.199e-16 Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = 2 Query: 296 MQIFVMTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 523 M I V TLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+++ S LHLVL LRGG Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGG 76
BLAST of FC876358 vs. ExPASy Swiss-Prot
Match: RUB1_YEAST (NEDD8-like protein RUB1 OS=Saccharomyces cerevisiae GN=RUB1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.091e-15 Identity = 40/76 (52.63%), Postives = 57/76 (75.00%), Query Frame = 2 Query: 68 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 295 M + VKTLTGK I++E++ SD + ++K +++KEGIPP QQRLIF GKQ++D T+ D ++ + LHLVL LRGG Sbjct: 1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76 HSP 2 Score: 81.2629 bits (199), Expect = 5.417e-15 Identity = 39/76 (51.32%), Postives = 56/76 (73.68%), Query Frame = 2 Query: 296 MQIFVMTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 523 M + V TLTGK I++E++ SD + ++K +++KEGIPP QQRLIF GKQ++D T+ D ++ + LHLVL LRGG Sbjct: 1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76
BLAST of FC876358 vs. ExPASy Swiss-Prot
Match: UCRP_MOUSE (Ubiquitin cross-reactive protein OS=Mus musculus GN=Isg15 PE=1 SV=4) HSP 1 Score: 82.4185 bits (202), Expect = 2.432e-15 Identity = 51/149 (34.23%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 80 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR-LRGGMQIFVMTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 523 VK L G + V +S T+ +K +I K G+P QQRL L+DG TL+ + ST+ LV++ + I V G + EV + T+D +K K+ +E + DQ L F G+ +ED L +Y ++ + T+ LRLRGG Sbjct: 7 VKMLGGNDFLVSVTNSMTVSELKKQIAQKIGVPAFQQRLAHQTAVLQDGLTLSSLGLGPSSTVMLVVQNCSEPLSILVRNERGHSNIYEVFLTQTVDTLKKKVSQREQVHEDQFWLSFEGRPMEDKELLGEYGLKPQCTVIKHLRLRGG 155
BLAST of FC876358 vs. ExPASy Swiss-Prot
Match: UBD_HUMAN (Ubiquitin D OS=Homo sapiens GN=UBD PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.148e-15 Identity = 49/156 (31.41%), Postives = 82/156 (52.56%), Query Frame = 2 Query: 74 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL----RGGMQIFVMTL--TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 523 + V++ +T + D++ +K ++ K +P Q L+ K L+ R+L+ Y I KE T+HL L++ + +F++ K L+V S ++ VKA I+ K GI P+ Q + GK+LEDG+ +ADY I+K + L L GG Sbjct: 10 VHVRSEEWDLMTFDANPYDSVKKIKEHVRSKTKVPVQDQVLLLGSKILKPRRSLSSYGIDKEKTIHLTLKVVKPSDEELPLFLVESGDEAKRHLLQVRRSSSVAQVKAMIETKTGIIPETQIVTCNGKRLEDGKMMADYGIRKGNLLFLACYCIGG 165
BLAST of FC876358 vs. ExPASy Swiss-Prot
Match: UCRP_HUMAN (Interferon-induced 17 kDa protein OS=Homo sapiens GN=ISG15 PE=1 SV=5) HSP 1 Score: 77.0258 bits (188), Expect = 1.022e-13 Identity = 52/151 (34.44%), Postives = 80/151 (52.98%), Query Frame = 2 Query: 80 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF--AGKQLEDGRTLADYNIQKESTLHLVL-RLRGGMQIFVMTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 523 VK L G + + SS ++ +KA+I K G+ QQRL +G L+D LA + ST+ LV+ + + I V G++ T EV + T+ ++K ++ EG+ D L F GK LED L +Y ++ ST+ + LRLRGG Sbjct: 7 VKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAVHPSGVALQDRVPLASQGLGPGSTVLLVVDKCDEPLSILVRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEYGLKPLSTVFMNLRLRGG 157
BLAST of FC876358 vs. ExPASy Swiss-Prot
Match: UBD_RAT (Ubiquitin D OS=Rattus norvegicus GN=Ubd PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13 Identity = 45/146 (30.82%), Postives = 75/146 (51.37%), Query Frame = 2 Query: 104 ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL-RGGMQIFVMTLT-----GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 523 +T + SD + + I+ + + Q L+ K L+ R L+ Y I KE+T+HL L++ + + ++L G+ L V S ++ VK I++ +PP +Q + GK+LEDG+ +ADYNI+ S L L GG Sbjct: 16 MTFDTTMSDKVKKINEHIRSQTKVSVQDQILLLDSKILKPHRALSSYGIDKENTIHLTLKVVKPSDEELPLSLVESGDEGQRHLLRVRRSSSVAQVKEMIENVTAVPPKKQIVNCNGKRLEDGKIMADYNIKSGSLLFLTAHCIGG 161
BLAST of FC876358 vs. ExPASy Swiss-Prot
Match: UBD_MOUSE (Ubiquitin D OS=Mus musculus GN=Ubd PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12 Identity = 44/148 (29.73%), Postives = 74/148 (50.00%), Query Frame = 2 Query: 98 KTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL----RGGMQIFVMTLT--GKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 523 + +T E +D + + I+ + + Q L+ K L+ R L+ Y I KE+T+HL L++ + +F++ G+ L V S ++ VK I+ + P +Q + GK+LEDG+ +ADYNI+ S L L GG Sbjct: 15 RLMTFETTENDKVKKINEHIRSQTKVSVQDQILLLDSKILKPHRKLSSYGIDKETTIHLTLKVVKPSDEELPLFLVESKNEGQRHLLRVRRSSSVAQVKEMIESVTSVIPKKQVVNCNGKKLEDGKIMADYNIKSGSLLFLTTHCTGG 162
BLAST of FC876358 vs. ExPASy Swiss-Prot
Match: UCRP_BOVIN (Ubiquitin cross-reactive protein OS=Bos taurus GN=ISG15 PE=2 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.631e-11 Identity = 47/150 (31.33%), Postives = 77/150 (51.33%), Query Frame = 2 Query: 80 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQ--LEDGRTLADYNIQKESTLHLVLRLRGGMQIFVMTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 523 VK L G+ I + + S T+ +K I K +P QQRL + L++G L ++ ST+ LV++ + I V G++ EV+ T+ +K ++ KE + DQ L F G+ ++D L +Y + K T+ + LRLRGG Sbjct: 7 VKMLGGQEILVPLRDSMTVSELKQFIAQKINVPAFQQRLAHLDSREVLQEGVPLVLQGLRAGSTVLLVVQ--NCISILVRNDKGRSSPYEVQLKQTVAELKQQVCQKERVQADQFWLSFEGRPMDDEHPLEEYGLMKGCTVFMNLRLRGG 154
BLAST of FC876358 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 2 Query: 68 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 295 M++F++TLTG L V +T+ +VKAKI+ EGIP +Q LI+ +LE+ L DYNI + TL LVL +RGG Sbjct: 28 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGG 103 The following BLAST results are available for this feature:
BLAST of FC876358 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876358 ID=FC876358; Name=FC876358; organism=Citrus clementina; type=EST; length=685bpback to top |