FC876363

Overview
NameFC876363
Unique NameFC876363
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHSD_PETHY (Chalcone synthase D OS=Petunia hybrida GN=CHSD PE=3 SV=2)

HSP 1 Score: 346.28 bits (887), Expect = 9.421e-95
Identity = 172/214 (80.37%), Postives = 189/214 (88.32%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            M TV E RNAQRA+GPATVLAIGT TP++ V+Q+ YPDYYFRIT SEH TELKEKFKR+ DKSMIKKRYM+LTE+ILKENPN+C  MAPSLDAR +I  VEVPKLGKEAA KAI+EW QPK++ITHL+FCTT+GV M GAD+QLTKL+GL  SVKRFMM Q GCFAGGTVLRLAKDLAENNKGARVLVVCSEIT VTFRGP DTH DSLVGQAL
Sbjct:    1 MVTVEEVRNAQRAEGPATVLAIGTATPSNCVDQSTYPDYYFRITDSEHKTELKEKFKRICDKSMIKKRYMHLTEKILKENPNICESMAPSLDARTNIYAVEVPKLGKEAAEKAIEEWNQPKSRITHLVFCTTTGVSMPGADFQLTKLLGLGSSVKRFMMNQLGCFAGGTVLRLAKDLAENNKGARVLVVCSEITVVTFRGPNDTHFDSLVGQAL 214          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHS1_DAUCA (Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 1.607e-94
Identity = 171/214 (79.91%), Postives = 188/214 (87.85%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            M TV E R AQRA+GPATVLAIGT TP + V+Q+ Y DYYFRIT SE   ELKEKF+RM +KSMI  RYM+LTE++LK+NP+ C YMA SLDARQDI V EVPKLGKEAA +AIKEWGQPK+KITHLIFCTTSGVDM GAD++LTKL+GLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNK ARVLVVCSEIT +TFRGP DTHLDSLVGQAL
Sbjct:    1 MVTVNEFRKAQRAEGPATVLAIGTATPPNCVDQSAYADYYFRITNSEDKPELKEKFRRMCEKSMINTRYMHLTEDLLKQNPSFCEYMASSLDARQDIVVNEVPKLGKEAALRAIKEWGQPKSKITHLIFCTTSGVDMPGADFRLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKNARVLVVCSEITVITFRGPNDTHLDSLVGQAL 214          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHS9_DAUCA (Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 4.675e-94
Identity = 170/214 (79.44%), Postives = 188/214 (87.85%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            M TV E R AQRA+GPATVLAIGT TP + V+Q+ Y DYYFRIT SE   ELKEKF+RM +KSMI  RYM+LTE++LK+NP+ C YMA SLDARQDI V EVPKLGKEAA +AIKEWG+PK+KITHLIFCTTSGVDM GAD++LTKL+GLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNK ARVLVVCSEIT +TFRGP DTHLDSLVGQAL
Sbjct:    1 MVTVNEFRKAQRAEGPATVLAIGTATPPNCVDQSAYADYYFRITNSEDKPELKEKFRRMCEKSMINTRYMHLTEDLLKQNPSFCEYMASSLDARQDIVVNEVPKLGKEAALRAIKEWGRPKSKITHLIFCTTSGVDMPGADFRLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKNARVLVVCSEITVITFRGPNDTHLDSLVGQAL 214          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHSF_PETHY (Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=2 SV=2)

HSP 1 Score: 336.65 bits (862), Expect = 7.464e-92
Identity = 162/214 (75.70%), Postives = 185/214 (86.45%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            M +V E R AQR +GPAT+LAIGT TP + V+Q  YPDY+FR+T S+H TELKEKFKRM+++SMIKK Y++LTEEILKENP++C + APS DARQDI VVEVPKLGKEAA  AIKEWGQPK+KITHL+FCTT+GVDM GADYQLTKL+GL PSVKR MMYQ GC+ GGTVLRLAKDLAENNKGAR LVVCSEITA+TF  P+DT LD LVGQAL
Sbjct:    1 MVSVEEVRRAQRREGPATILAIGTATPLNCVDQTTYPDYFFRVTNSDHKTELKEKFKRMFERSMIKKSYLHLTEEILKENPSICEHKAPSFDARQDIVVVEVPKLGKEAAQNAIKEWGQPKSKITHLVFCTTTGVDMHGADYQLTKLLGLSPSVKRLMMYQLGCYGGGTVLRLAKDLAENNKGARALVVCSEITAITFHAPSDTDLDVLVGQAL 214          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHSY_EQUAR (Chalcone synthase OS=Equisetum arvense GN=CHS PE=2 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 1.078e-90
Identity = 165/215 (76.74%), Postives = 182/215 (84.65%), Query Frame = 1
Query:   55 EMATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            E A     R AQRA+GPATVLAIGT  PA+   Q+ YPD+YF IT S+HMTELK KF RM  KS IKKRYM+L  EILK NP++CAY   SLD RQDI VVEVPKLGKEA+ KAIKEWGQPK+KITHL+FCTTSGVDM GAD+ LTKL+GLRPSVKR MMYQQGCFAGGTVLR+AKD+AENNKGARVLVVCSEIT VTFRGP++THLDSLVGQAL
Sbjct:    6 ESADASSRRLAQRANGPATVLAIGTANPANVFEQSSYPDFYFDITNSQHMTELKLKFSRMCQKSGIKKRYMHLNSEILKANPSLCAYWEKSLDVRQDIAVVEVPKLGKEASLKAIKEWGQPKSKITHLVFCTTSGVDMPGADWALTKLLGLRPSVKRLMMYQQGCFAGGTVLRVAKDVAENNKGARVLVVCSEITCVTFRGPSETHLDSLVGQAL 220          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: THS2_VITVI (Stilbene synthase 2 OS=Vitis vinifera GN=GSVIVT00004047001 PE=2 SV=2)

HSP 1 Score: 331.257 bits (848), Expect = 3.136e-90
Identity = 161/214 (75.23%), Postives = 186/214 (86.92%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            MA+V E RNAQRA GPAT+LAIGT TP H V Q+DY DYYFR+TKSEHMT LK+KF R+ DKSMIKKRY++LTEE+L+E+PN+ AYMAPSL+ RQ+I   EVPKLGKEAA KA+KEWGQPK+KITHL+FCTTSGV+M GADY+L  L+GL PSV+R M+Y QGC+AGGTVLR AKDLAENN GARVLVVCSEIT VTFRGP++  LDSLVGQAL
Sbjct:    1 MASVEEIRNAQRAKGPATILAIGTATPDHCVYQSDYADYYFRVTKSEHMTALKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQAL 214          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: THS5_VITVI (Stilbene synthase 5 OS=Vitis vinifera GN=GSVIVT00007357001 PE=3 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 1.192e-89
Identity = 160/214 (74.77%), Postives = 186/214 (86.92%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            MA+V E RNAQRA GPAT+LAIGT TP H V Q+DY DYYF++TKSEHMTELK+KF R+ DKSMIKKRY++LTEE+L+E+PN+ AYMAPSL+ RQ+I   EVPKLGKEAA KA+KEWGQPK+KITHL+FCTTSGV+M GADY+L  L+GL  SV+R M+Y QGC+AGGTVLR AKDLAENN GARVLVVCSEIT VTFRGP++  LDSLVGQAL
Sbjct:    1 MASVEEIRNAQRAKGPATILAIGTATPDHCVYQSDYADYYFKVTKSEHMTELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLETSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQAL 214          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: VPS_HUMLU (Phloroisovalerophenone synthase OS=Humulus lupulus GN=VPS PE=2 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 2.033e-89
Identity = 156/212 (73.58%), Postives = 184/212 (86.79%), Query Frame = 1
Query:   64 TVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            TV + R AQRA+GPAT+LAIGT  PA+  NQAD+PDYYFR+TKSEHMT+LK+KF+RM +KS IKKRY++LTEE LK+NP++C Y APSL+ RQD+ VVEVPKLGKEAA  AIKEWGQPK+KITHLIFCT S +DM GADYQ  KL+GLRPSVKR M+YQ GC+AGG VLR+AKD+AENNKGARVL+VCSEITA  FRGP++ HLD LVGQ+L
Sbjct:    5 TVEQIRKAQRAEGPATILAIGTAVPANCFNQADFPDYYFRVTKSEHMTDLKKKFQRMCEKSTIKKRYLHLTEEHLKQNPHLCEYNAPSLNTRQDMLVVEVPKLGKEAAINAIKEWGQPKSKITHLIFCTGSSIDMPGADYQCAKLLGLRPSVKRVMLYQLGCYAGGKVLRIAKDIAENNKGARVLIVCSEITACIFRGPSEKHLDCLVGQSL 216          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: THS4_VITVI (Stilbene synthase 4 OS=Vitis vinifera GN=GSVIVT00005194001 PE=3 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 2.033e-89
Identity = 160/214 (74.77%), Postives = 187/214 (87.38%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            MA+V E RNAQRA GPATVLAIGT TP + + Q+D+ DYYFR+TKSEHMTELK+KF R+ DKSMIKKRY++LTEE+L+E+PN+ AYMAPSL+ RQ+I   EVPKLGKEAA KA+KEWGQPK+KITHL+FCTTSGV+M GADY+L  L+GL PSV+R M+Y QGC+AGGTVLR AKDLAENN GARVLVVCSEIT VTFRGP++  LDSLVGQAL
Sbjct:    1 MASVEEIRNAQRAKGPATVLAIGTATPDNCLYQSDFADYYFRVTKSEHMTELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQAL 214          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: THS7_VITVI (Stilbene synthase 6 OS=Vitis vinifera GN=STS PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 5.914e-89
Identity = 158/214 (73.83%), Postives = 186/214 (86.92%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            MA+V E RNAQRA GPAT+LAIGT TP H V Q+DY DYYFR+TKSEHMTELK+KF R+ DKSMIKKRY++LTEE+L+E+PN+ AYMAPSL+ RQ+I   EVP+LG++AA KA+KEWGQPK+KITHL+FCTTSGV+M GADY+L  L+GL  SV+R M+Y QGC+AGGTVLR AKDLAENN GARVLVVCSEIT VTFRGP++  LDSLVGQAL
Sbjct:    1 MASVEEFRNAQRAKGPATILAIGTATPDHCVYQSDYADYYFRVTKSEHMTELKKKFNRICDKSMIKKRYIHLTEEMLEEHPNIGAYMAPSLNIRQEIITAEVPRLGRDAALKALKEWGQPKSKITHLVFCTTSGVEMPGADYKLANLLGLETSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTFRGPSEDALDSLVGQAL 214          
The following BLAST results are available for this feature:
BLAST of FC876363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSD_PETHY9.421e-9580.37Chalcone synthase D OS=Petunia hybrida GN=CHSD PE=... [more]
CHS1_DAUCA1.607e-9479.91Chalcone synthase 1 OS=Daucus carota GN=CHS1 PE=2 ... [more]
CHS9_DAUCA4.675e-9479.44Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 ... [more]
CHSF_PETHY7.464e-9275.70Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=... [more]
CHSY_EQUAR1.078e-9076.74Chalcone synthase OS=Equisetum arvense GN=CHS PE=2... [more]
THS2_VITVI3.136e-9075.23Stilbene synthase 2 OS=Vitis vinifera GN=GSVIVT000... [more]
THS5_VITVI1.192e-8974.77Stilbene synthase 5 OS=Vitis vinifera GN=GSVIVT000... [more]
VPS_HUMLU2.033e-8973.58Phloroisovalerophenone synthase OS=Humulus lupulus... [more]
THS4_VITVI2.033e-8974.77Stilbene synthase 4 OS=Vitis vinifera GN=GSVIVT000... [more]
THS7_VITVI5.914e-8973.83Stilbene synthase 6 OS=Vitis vinifera GN=STS PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC32003H06EF DevOvary1 Citrus clementina cDNA clone C32003H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876363 ID=FC876363; Name=FC876363; organism=Citrus clementina; type=EST; length=700bp
GAGTGCACACTCACCAAGCACGAGCCACATACATATTCATTAAGGGTTCA
ACTTGAAATGGCAACCGTTCGAGAGAGCAGAAACGCTCAGCGTGCCGACG
GGCCGGCCACCGTCCTCGCCATCGGAACGGGCACGCCTGCCCACAGTGTC
AACCAGGCTGATTATCCCGACTATTACTTCAGGATCACAAAGAGCGAGCA
TATGACGGAGCTTAAAGAGAAGTTCAAGCGCATGTGGGACAAGTCGATGA
TTAAGAAGCGTTACATGTACTTGACGGAAGAGATTTTGAAGGAAAACCCC
AACATGTGCGCTTACATGGCTCCATCACTCGACGCACGTCAAGACATTGA
GGTGGTCGAAGTGCCAAAGCTCGGGAAAGAAGCTGCTACAAAGGCCATCA
AAGAATGGGGCCAGCCCAAGACTAAGATCACCCACCTCATCTTCTGCACC
ACCTCCGGGGTCGACATGACCGGAGCCGACTACCAGCTCACCAAACTGAT
CGGTCTGCGCCCCTCCGTCAAGCGCTTCATGATGTACCAACAAGGATGTT
TCGCCGGCGGCACTGTTCTTCGCCTCGCTAAAGACTTGGCTGAGAACAAC
AAGGGCGCTCGCGTTCTTGTTGTCTGTTCGGAGATCACGGCAGTCACTTT
CCGCGGNCCTGCCGATACTCATCTTGATTCTCTTGTGGGCCAGGCTTTGT
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