FC876363

Overview
NameFC876363
Unique NameFC876363
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHSB_PETHY (Chalcone synthase B OS=Petunia hybrida GN=CHSB PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.407e-82
Identity = 143/205 (69.76%), Postives = 176/205 (85.85%), Query Frame = 1
Query:   85 AQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            AQRA+GPA +LAIGT TP H V+Q  YPDYYFR+T S+H+ +LKEKF+R+  K+MIKKR+M+LTEE+L++NP +C++  PSLD RQDI V E+PKLGKEAA KAI EWGQPK+ ITHL+FCT SGVDM GAD QL KL+GL PSV+R MMYQQGCFAGGT+LRLAKDLAENNKGARVLVVC+E +A+ FRGP++ ++D+L+ QAL
Sbjct:   13 AQRAEGPAKILAIGTATPFHWVDQNSYPDYYFRVTNSQHLVDLKEKFRRICSKTMIKKRHMFLTEELLRKNPTLCSHNEPSLDIRQDILVSEIPKLGKEAALKAIGEWGQPKSTITHLVFCTRSGVDMPGADCQLVKLLGLSPSVQRLMMYQQGCFAGGTMLRLAKDLAENNKGARVLVVCAESSAIGFRGPSEANVDNLIAQAL 217          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: DPSS_PINSY (Dihydropinosylvin synthase OS=Pinus sylvestris PE=1 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 3.253e-79
Identity = 142/208 (68.27%), Postives = 179/208 (86.06%), Query Frame = 1
Query:   79 RNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYM-APSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            R  QRADG A++LAIGT  P ++V+Q+ YPD+YFRIT +EH TELK+KFKR+ ++S IK+RYMYLTEEILK+NP++CA++  PSLDARQ +  +EVP+L KEAA KAI+EWGQ K+ ITHLIFC+T+  D+ GAD+++ KL+GL PSVKR  ++Q GCFAGGTVLR+AKDLAENN+GARVLV+CSE TAVTFRGP++THLDSLVGQAL
Sbjct:   10 RKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQAL 217          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: DPS1_PINST (Pinosylvin synthase 1 OS=Pinus strobus GN=STS1 PE=1 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 4.248e-79
Identity = 142/208 (68.27%), Postives = 176/208 (84.62%), Query Frame = 1
Query:   79 RNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYM-APSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            R +QRADG A++LAIGT  P + V+Q+ YPDYYFR+T +E  T+LK+KFKR+ ++S IKKR+MYLTEEILK+NP +CA++  PSLD RQ +   EVP+LGKEAA KAI+EWGQPK++ITHLIFCTT+  D+ GAD+++ KL+GL PSVKR  ++Q GCFAGGTVLRLAKDLAENN+GARVLVVCSE TAVTFRGP++THLD LVG AL
Sbjct:   13 RKSQRADGFASILAIGTANPPNVVDQSTYPDYYFRVTNNEDNTDLKDKFKRICERSAIKKRHMYLTEEILKKNPELCAFLEVPSLDTRQAMLAAEVPRLGKEAAEKAIEEWGQPKSRITHLIFCTTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRLAKDLAENNRGARVLVVCSENTAVTFRGPSETHLDGLVGLAL 220          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: DPS2_PINST (Pinosylvin synthase 2 OS=Pinus strobus GN=STS2 PE=2 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 7.247e-79
Identity = 143/208 (68.75%), Postives = 176/208 (84.62%), Query Frame = 1
Query:   79 RNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYM-APSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            R +QRADG A++LAIGT  P + V+Q+ YPDYYFR T +E  T+LK+KFKR+ ++S IKKR+MYLTEEILK+NP +CA++  PSLD RQ +  VEVP+LGKEAA KAI+EWGQPK++ITHLIFCTT+  D+ GAD+++ KL+GL PSVKR  ++Q GCFAGGTVLRLAKDLAENN+GARVLVVCSE TAVTFRGP++THLD LVG AL
Sbjct:   13 RKSQRADGFASILAIGTANPPNVVDQSTYPDYYFRNTNNEDNTDLKDKFKRICERSAIKKRHMYLTEEILKKNPELCAFLEVPSLDTRQAMLAVEVPRLGKEAAEKAIEEWGQPKSRITHLIFCTTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRLAKDLAENNRGARVLVVCSENTAVTFRGPSETHLDGLVGLAL 220          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHSY_PERAE (Chalcone synthase OS=Persea americana GN=CHS PE=2 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 7.499e-76
Identity = 148/215 (68.84%), Postives = 164/215 (76.28%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYY-FRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            M  V   R  QRA+GPAT++AIGT TP ++V+Q++YPDYY F    +      +  FKRM +KSMIKKRYMYLTE   K            L ARQD+ VVEVPKLGKE   KAIK  GQPK+KI  L+FCTTSGVDM GADYQLTK+ GL PSVKR MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQAL
Sbjct:    1 MVNVEAIRKVQRAEGPATIMAIGTSTPPNAVDQSEYPDYYYFGSPTASTRPSSRRSFKRMCEKSMIKKRYMYLTETYWKRIQMFVPTWLLPLKARQDMVVVEVPKLGKEVQPKAIKGMGQPKSKINPLVFCTTSGVDMPGADYQLTKVFGLPPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQAL 215          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHSA_IPOPL (Chalcone synthase A (Fragment) OS=Ipomoea platensis GN=CHSA PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 9.794e-76
Identity = 139/208 (66.83%), Postives = 168/208 (80.77%), Query Frame = 1
Query:   76 SRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            SR A+R +G A +LA+GT TPA+ V+Q  YPD+YFRIT SEH+ E KEKF+R+ +KS I+KR++ LTEE+LK+NPN+C Y   SL+ RQD  V EVPKLGKEAA KAIKEWG+P ++ITHL+FCTTSGVDM GAD+QLTKL+GL  SVKR MMYQQGC AG  +LRLAKDLAENNKGARVLVVCSE+T   FRGP+    D+L+ Q L
Sbjct:   11 SRRAKRFEGHAKILAVGTATPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVLTEELLKKNPNLCTYNETSLNTRQDTLVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNISVKRLMMYQQGCNAGAAMLRLAKDLAENNKGARVLVVCSEVTLSVFRGPSLQQEDNLLAQCL 218          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHSB_IPOPU (Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE=3 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.083e-74
Identity = 138/208 (66.35%), Postives = 167/208 (80.29%), Query Frame = 1
Query:   76 SRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            SR A+R +G A +LAIGT TPA  V+Q  YPD+YFRIT S+H+ E KEKF+R+ +KS I+KR++ LTEE+LK+NPN+C Y   SL+ RQDI V EVPKLGKEAA KAIKEWG+P ++ITHL+FCTTSGVDM GAD+QLTKL+GL  SVKR MMYQQGC AG  +LRLAKDLAE+NKG RVLVVC+EIT   FRGP+    D+L+ Q L
Sbjct:   13 SRRAKRLEGDAKILAIGTATPASWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHLVLTEELLKKNPNLCTYNETSLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAESNKGGRVLVVCAEITINIFRGPSLEQDDNLLAQCL 220          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHSB_IPOCO (Chalcone synthase B (Fragment) OS=Ipomoea cordatotriloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.414e-74
Identity = 137/208 (65.87%), Postives = 167/208 (80.29%), Query Frame = 1
Query:   76 SRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            SR  +R +G A +LAIGT TPA+ V+Q  YPD+YFRIT S+H+ + KEKF+R+ +KS I+KR+M LTEE+LK+NPN+C Y   SL+ RQDI V EVPKLGKEAA KAIKEWG+P ++ITHL+FCTTSGVDM GAD+QLTKL+GL  SVKR MMYQQGC AG  +LRLAKD+AENNKGARVLVVCSE+    FRGP+    D+L+ Q L
Sbjct:   13 SRREKRFEGHAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLDHKEKFRRICNKSKIRKRHMILTEELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDVAENNKGARVLVVCSEVMLSVFRGPSLQQEDNLLAQCL 220          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHSA_IPOPU (Chalcone synthase A OS=Ipomoea purpurea GN=CHSA PE=3 SV=2)

HSP 1 Score: 278.1 bits (710), Expect = 3.151e-74
Identity = 136/208 (65.38%), Postives = 165/208 (79.33%), Query Frame = 1
Query:   76 SRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            S  A+R +G A +LAIGT TPA+ V+Q  YPD+YFRIT SEH+ E KEKF+R+ +KS I KR++ +TEE+LK+NPN+C Y   SL+ RQDI V EVPKLGK+AA KAIKEWG+P ++ITHL+FCTTSGVDM GAD+QLTKL+GL  SVKR MMYQQGC AG  +LRLAKDLAENNKG RVLVVCSE+    FRGP+    D+L+ Q L
Sbjct:   13 SHRAKRLEGDAKILAIGTATPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIMKRHLVITEELLKKNPNLCTYNEASLNTRQDILVSEVPKLGKDAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAENNKGGRVLVVCSEVMLSVFRGPSLQQEDNLLAQCL 220          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTF (Chalcone synthase A (Fragment) OS=Ipomoea trifida GN=CHSA PE=3 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 4.115e-74
Identity = 138/205 (67.32%), Postives = 166/205 (80.98%), Query Frame = 1
Query:   85 AQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            A+R +G A +LAIGT TP + V+QA YPD+YFRIT SEH+ E KEKF+R+ +KS I+KR++ LT+E+LK+NPN+C Y   SL+ RQDI V EVPKLGKEAA KAIKEWG+P ++ITHL+FCTTSGVDM GAD+QLTKL+GL  SVKR MMYQQGC AG  +LRL KDLAENNKGARVLVVCSEIT   FRGP+    D+L+ Q L
Sbjct:   14 AKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVLTKELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLVKDLAENNKGARVLVVCSEITINIFRGPSLEQDDNLLAQCL 218          
The following BLAST results are available for this feature:
BLAST of FC876363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSB_PETHY2.407e-8269.76Chalcone synthase B OS=Petunia hybrida GN=CHSB PE=... [more]
DPSS_PINSY3.253e-7968.27Dihydropinosylvin synthase OS=Pinus sylvestris PE=... [more]
DPS1_PINST4.248e-7968.27Pinosylvin synthase 1 OS=Pinus strobus GN=STS1 PE=... [more]
DPS2_PINST7.247e-7968.75Pinosylvin synthase 2 OS=Pinus strobus GN=STS2 PE=... [more]
CHSY_PERAE7.499e-7668.84Chalcone synthase OS=Persea americana GN=CHS PE=2 ... [more]
CHSA_IPOPL9.794e-7666.83Chalcone synthase A (Fragment) OS=Ipomoea platensi... [more]
CHSB_IPOPU1.083e-7466.35Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE... [more]
CHSB_IPOCO1.414e-7465.87Chalcone synthase B (Fragment) OS=Ipomoea cordatot... [more]
CHSA_IPOPU3.151e-7465.38Chalcone synthase A OS=Ipomoea purpurea GN=CHSA PE... [more]
CHSA_IPOTF4.115e-7467.32Chalcone synthase A (Fragment) OS=Ipomoea trifida ... [more]

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Properties
Property NameValue
Genbank descriptionC32003H06EF DevOvary1 Citrus clementina cDNA clone C32003H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876363 ID=FC876363; Name=FC876363; organism=Citrus clementina; type=EST; length=700bp
GAGTGCACACTCACCAAGCACGAGCCACATACATATTCATTAAGGGTTCA
ACTTGAAATGGCAACCGTTCGAGAGAGCAGAAACGCTCAGCGTGCCGACG
GGCCGGCCACCGTCCTCGCCATCGGAACGGGCACGCCTGCCCACAGTGTC
AACCAGGCTGATTATCCCGACTATTACTTCAGGATCACAAAGAGCGAGCA
TATGACGGAGCTTAAAGAGAAGTTCAAGCGCATGTGGGACAAGTCGATGA
TTAAGAAGCGTTACATGTACTTGACGGAAGAGATTTTGAAGGAAAACCCC
AACATGTGCGCTTACATGGCTCCATCACTCGACGCACGTCAAGACATTGA
GGTGGTCGAAGTGCCAAAGCTCGGGAAAGAAGCTGCTACAAAGGCCATCA
AAGAATGGGGCCAGCCCAAGACTAAGATCACCCACCTCATCTTCTGCACC
ACCTCCGGGGTCGACATGACCGGAGCCGACTACCAGCTCACCAAACTGAT
CGGTCTGCGCCCCTCCGTCAAGCGCTTCATGATGTACCAACAAGGATGTT
TCGCCGGCGGCACTGTTCTTCGCCTCGCTAAAGACTTGGCTGAGAACAAC
AAGGGCGCTCGCGTTCTTGTTGTCTGTTCGGAGATCACGGCAGTCACTTT
CCGCGGNCCTGCCGATACTCATCTTGATTCTCTTGTGGGCCAGGCTTTGT
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