FC876363

Overview
NameFC876363
Unique NameFC876363
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10260 contig Ccv1_Contig10260:1..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHSY_HYDMC (Chalcone synthase OS=Hydrangea macrophylla GN=CHS PE=2 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 1.773e-101
Identity = 179/214 (83.64%), Postives = 196/214 (91.59%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            M TV E R AQRA+GPAT+LAIGT TP + V+Q+ YPD+YFR+T SEH  ELK KF+RM D S IKKRYM+LTEEILKENPN+CAYMAPSLDARQD+ VVE+PKLGKEAAT+AIKEWGQPK+KITHL+FCTTSGVDM GADYQLTKL+GLRPSVKR MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQAL
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPPNYVDQSTYPDFYFRVTNSEHKKELKAKFQRMCDNSQIKKRYMHLTEEILKENPNICAYMAPSLDARQDMVVVEIPKLGKEAATRAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQAL 214          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHSY_CHRAE (Chalcone synthase OS=Chrysosplenium americanum GN=CHS PE=2 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 1.773e-101
Identity = 180/213 (84.51%), Postives = 196/213 (92.02%), Query Frame = 1
Query:   61 ATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            A + E RNAQRA+GPAT+LAIGT TPA+ V QADYPD+YFRIT SEH TELKEKF+RM DKSMIKKRYM+LTE++LKENP MC YMAPSLDARQD+ VVE+ KLGKEAA KAIKEWGQPK+KITHL+FCTTSGVDM GADYQLTKL+GLRPSVKR MMYQQGCF GGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDSLVGQAL
Sbjct:    5 ALMEEIRNAQRAEGPATILAIGTATPANCVIQADYPDFYFRITNSEHKTELKEKFQRMCDKSMIKKRYMHLTEDLLKENPKMCEYMAPSLDARQDMVVVEIRKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFPGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQAL 217          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHS4_IPOBA (Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF4 PE=2 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 1.773e-101
Identity = 180/214 (84.11%), Postives = 195/214 (91.12%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            M TV E R AQRA+GPAT+LAIGT TPA+ VNQ+ YPDYYFRIT SEH TELKE+F+RM DKSMI KRYM+LTEEILKENP+ C YMAPSLDARQDI VVEVPKLGKEAA  AIKEWGQPK+KITH++FCTTSGVDM GADYQLTKL+GLRPSVKR MMYQQGCFAGGTVLRLAKDLAENNKGARVL+VCSEIT VTFRGP++THLDSLVGQAL
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKERFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSETHLDSLVGQAL 214          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHS3_SINAL (Chalcone synthase 3 OS=Sinapis alba GN=CHS3 PE=2 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 1.773e-101
Identity = 180/213 (84.51%), Postives = 197/213 (92.49%), Query Frame = 1
Query:   61 ATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            +++ E R AQRADGPA +LAIGT  PA+ V QA+YPDYYFRIT SEHMT+LKEKFKRM DKS I+KR+M+LTEE LK+NPNMCAYMAPSLDARQDI VVEVPKLGKEAA KAIKEWGQPK+KITH++FCTTSGVDM GADYQLTKL+GLRPSVKR MMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDSLVGQAL
Sbjct:    7 SSLDEIRKAQRADGPAGILAIGTANPANHVIQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHLTEEFLKDNPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQAL 219          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHS1_SINAL (Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 1.773e-101
Identity = 180/213 (84.51%), Postives = 197/213 (92.49%), Query Frame = 1
Query:   61 ATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            +++ E R AQRADGPA +LAIGT  PA+ V QA+YPDYYFRIT SEHMT+LKEKFKRM DKS I+KR+M+LTEE LK+NPNMCAYMAPSLDARQDI VVEVPKLGKEAA KAIKEWGQPK+KITH++FCTTSGVDM GADYQLTKL+GLRPSVKR MMYQQGCFAGGTVLRLAKDLAENN+GARVLVVCSEITAVTFRGP+DTHLDSLVGQAL
Sbjct:    7 SSLDEIRKAQRADGPAGILAIGTANPANHVIQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHLTEEFLKDNPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQAL 219          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHSY_PERFR (Chalcone synthase OS=Perilla frutescens GN=CHS PE=2 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 2.315e-101
Identity = 180/214 (84.11%), Postives = 197/214 (92.06%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            M TV + R AQRA+GPATV+AIGT TP + V+Q+ YPDYYFRIT SEH T+LKEKFKRM +KSMI+KRYM+LTEE LKENPNM AYMAPSLDARQDI VVEVPKLGKEAA KAIKEWGQPK+KITHL+FCTTSGVDM GADYQLTKL+GLRPSVKRFMMYQQGCFAGGTVLR+AKDLAENN GARVLVVCSEITAVTFRGP+++HLDSLVGQAL
Sbjct:    1 MVTVEDIRRAQRAEGPATVMAIGTATPENCVDQSTYPDYYFRITNSEHRTDLKEKFKRMCEKSMIRKRYMHLTEEFLKENPNMTAYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRMAKDLAENNAGARVLVVCSEITAVTFRGPSESHLDSLVGQAL 214          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHS7_IPOBA (Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-DIII PE=2 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 2.315e-101
Identity = 180/214 (84.11%), Postives = 194/214 (90.65%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            M TV E R A+RA+GPAT+LAIGT TPA+ VNQ+ YPDYYFRIT SEH TELKEKF+RM DKSMI KRYM+LTEEILKENP+ C YMAPSLDARQDI VVEVPKLGKEAA  AIKEWGQPK+KITH+ FCTTSGVDM GADYQLTKL+GLRPSVKR MMYQQGCFAGGTVLRLAKDLAENNKGARVL+VCSEIT VTFRGP++THLDSLVGQAL
Sbjct:    1 MVTVEEVRKAKRAEGPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVFFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSETHLDSLVGQAL 214          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHS6_PEA (Chalcone synthase 6 OS=Pisum sativum GN=CHS6 PE=2 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 2.315e-101
Identity = 179/214 (83.64%), Postives = 197/214 (92.06%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            M +V E R AQRA+GPAT+LAIGT TPA+ V Q+ YPD+YF+IT SEH T LKEKF+RM DKSMIK+RYMYLTEEILKENP++C YMAPSLDARQD+ VVEVP+LGKEAA KAIKEWGQPK+KITHLIFCTTSGVDM GADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQAL
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTATPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYMYLTEEILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQAL 214          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHSY_CATRO (Chalcone synthase OS=Catharanthus roseus GN=CHS PE=2 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 3.023e-101
Identity = 182/214 (85.05%), Postives = 197/214 (92.06%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            M  V E RNAQRA GPATVLAIGT TP++ V+Q+ YPDYYFRIT SEH TELKEKFKRM +KSMIKKRYM+LTEEIL+ENPN+CAYMAPSLDARQ+I VVEVPKLGKEAA KAIKEWGQ K+KITHL+FCTTSGVDM GADYQLTKL+GLR SVKR MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+++HLDSLVGQAL
Sbjct:    1 MVNVEEIRNAQRAQGPATVLAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCEKSMIKKRYMHLTEEILQENPNICAYMAPSLDARQNIVVVEVPKLGKEAAQKAIKEWGQSKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSESHLDSLVGQAL 214          
BLAST of FC876363 vs. ExPASy Swiss-Prot
Match: CHS3_TRISU (Chalcone synthase 3 OS=Trifolium subterraneum GN=CHS3 PE=2 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 3.023e-101
Identity = 179/214 (83.64%), Postives = 195/214 (91.12%), Query Frame = 1
Query:   58 MATVRESRNAQRADGPATVLAIGTGTPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMWDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIEVVEVPKLGKEAATKAIKEWGQPKTKITHLIFCTTSGVDMTGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 699
            M +V E R AQRA+GPAT+LAIGT  PA+ V QA YPD+YF+IT SEH  ELKEKF+RM DKSMIK RYMYLTEEILKENP++C YMAPSLDARQD+ VVEVP+LGKEAA KAIKEWGQPK+KITHLIFCTTSGVDM GADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSE+TAVTFRGP+DTHLDSLVGQAL
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTANPANKVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYMYLTEEILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQAL 214          
The following BLAST results are available for this feature:
BLAST of FC876363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSY_HYDMC1.773e-10183.64Chalcone synthase OS=Hydrangea macrophylla GN=CHS ... [more]
CHSY_CHRAE1.773e-10184.51Chalcone synthase OS=Chrysosplenium americanum GN=... [more]
CHS4_IPOBA1.773e-10184.11Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS3_SINAL1.773e-10184.51Chalcone synthase 3 OS=Sinapis alba GN=CHS3 PE=2 S... [more]
CHS1_SINAL1.773e-10184.51Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 S... [more]
CHSY_PERFR2.315e-10184.11Chalcone synthase OS=Perilla frutescens GN=CHS PE=... [more]
CHS7_IPOBA2.315e-10184.11Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-D... [more]
CHS6_PEA2.315e-10183.64Chalcone synthase 6 OS=Pisum sativum GN=CHS6 PE=2 ... [more]
CHSY_CATRO3.023e-10185.05Chalcone synthase OS=Catharanthus roseus GN=CHS PE... [more]
CHS3_TRISU3.023e-10183.64Chalcone synthase 3 OS=Trifolium subterraneum GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32003H06EF DevOvary1 Citrus clementina cDNA clone C32003H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876363 ID=FC876363; Name=FC876363; organism=Citrus clementina; type=EST; length=700bp
GAGTGCACACTCACCAAGCACGAGCCACATACATATTCATTAAGGGTTCA
ACTTGAAATGGCAACCGTTCGAGAGAGCAGAAACGCTCAGCGTGCCGACG
GGCCGGCCACCGTCCTCGCCATCGGAACGGGCACGCCTGCCCACAGTGTC
AACCAGGCTGATTATCCCGACTATTACTTCAGGATCACAAAGAGCGAGCA
TATGACGGAGCTTAAAGAGAAGTTCAAGCGCATGTGGGACAAGTCGATGA
TTAAGAAGCGTTACATGTACTTGACGGAAGAGATTTTGAAGGAAAACCCC
AACATGTGCGCTTACATGGCTCCATCACTCGACGCACGTCAAGACATTGA
GGTGGTCGAAGTGCCAAAGCTCGGGAAAGAAGCTGCTACAAAGGCCATCA
AAGAATGGGGCCAGCCCAAGACTAAGATCACCCACCTCATCTTCTGCACC
ACCTCCGGGGTCGACATGACCGGAGCCGACTACCAGCTCACCAAACTGAT
CGGTCTGCGCCCCTCCGTCAAGCGCTTCATGATGTACCAACAAGGATGTT
TCGCCGGCGGCACTGTTCTTCGCCTCGCTAAAGACTTGGCTGAGAACAAC
AAGGGCGCTCGCGTTCTTGTTGTCTGTTCGGAGATCACGGCAGTCACTTT
CCGCGGNCCTGCCGATACTCATCTTGATTCTCTTGTGGGCCAGGCTTTGT
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