FC876364

Overview
NameFC876364
Unique NameFC876364
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9909 contig Ccv1_Contig9909:8..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK_BURCH (S-adenosylmethionine synthetase OS=Burkholderia cenocepacia (strain HI2424) GN=metK PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.324e-47
Identity = 103/194 (53.09%), Postives = 127/194 (65.46%), Query Frame = 3
Query:  105 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQH 686
            +LFTSESV+EGHPDK+ DQISDA+LDA LEQD  S+VA ET   T +V++ GEITT A +DY +I RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DET E MPL   L+ +L  R   +R++    WLRPD K+QVTV Y +      P  + TV   TQH
Sbjct:    5 YLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDN-LDQGAGDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGRLQWLRPDAKSQVTVRYVDGK----PDSIDTVVLSTQH 193          
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK_BURCC (S-adenosylmethionine synthetase OS=Burkholderia cenocepacia (strain MC0-3) GN=metK PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.324e-47
Identity = 103/194 (53.09%), Postives = 127/194 (65.46%), Query Frame = 3
Query:  105 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQH 686
            +LFTSESV+EGHPDK+ DQISDA+LDA LEQD  S+VA ET   T +V++ GEITT A +DY +I RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DET E MPL   L+ +L  R   +R++    WLRPD K+QVTV Y +      P  + TV   TQH
Sbjct:    5 YLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDN-LDQGAGDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGRLQWLRPDAKSQVTVRYVDGK----PDSIDTVVLSTQH 193          
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK_BURCA (S-adenosylmethionine synthetase OS=Burkholderia cenocepacia (strain AU 1054) GN=metK PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.324e-47
Identity = 103/194 (53.09%), Postives = 127/194 (65.46%), Query Frame = 3
Query:  105 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQH 686
            +LFTSESV+EGHPDK+ DQISDA+LDA LEQD  S+VA ET   T +V++ GEITT A +DY +I RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DET E MPL   L+ +L  R   +R++    WLRPD K+QVTV Y +      P  + TV   TQH
Sbjct:    5 YLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDN-LDQGAGDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGRLQWLRPDAKSQVTVRYVDGK----PDSIDTVVLSTQH 193          
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK1_RHOPB (S-adenosylmethionine synthetase 1 OS=Rhodopseudomonas palustris (strain BisB18) GN=metK1 PE=3 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.324e-47
Identity = 97/201 (48.26%), Postives = 126/201 (62.69%), Query Frame = 3
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQHDETV 698
            M     TSESV EGHPDK+CDQISD +LDAC+ QDP S+VA ET    N+ ++ GEITT A++D E+  R   ++IG+    +G D+D C +L N+  QSPDI  GV      R +++GAGDQG  +GYA DET+  MP+   LA  L  RLT +R++ T  WLRPDGK QVT+ Y  D     P  + +V    QHDE V
Sbjct:    1 MREHCVTSESVTEGHPDKVCDQISDGILDACVAQDPASRVAVETLVSGNIAVIAGEITTTAQIDAERTARAVIKAIGYDDPALGFDSDSCFILTNLRTQSPDINLGV-----SRGDELGAGDQGVFYGYACDETANLMPIPIALAHTLSLRLTMMRRDGTLPWLRPDGKVQVTMRYGRDGR---PCGLDSVVVSAQHDEAV 193          
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK_THET8 (S-adenosylmethionine synthetase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=metK PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.647e-47
Identity = 108/204 (52.94%), Postives = 127/204 (62.25%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR------PED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQHDETV 698
            L TSESV EGHPDKL D+ISDA+LDA + QD +++VA ET   T +V V GEITT+  VD   +VR T R +G+     G DAD C VL  I++QSPDIA GV+  +  R      P D +GAGDQG MFGYATDET E MPL   LA +L  RL EVRK     +LRPDGK QVTV Y  D     P+ V TV    QH   V
Sbjct:    6 LVTSESVTEGHPDKLADRISDAILDALIAQDKKARVAAETLVTTGLVFVAGEITTEGYVDIPNLVRKTVREVGYTRAKYGFDADTCAVLTAIDEQSPDIAGGVNLSYEWRVLKSTDPLDRVGAGDQGLMFGYATDETPELMPLPITLAHRLTMRLAEVRKTGLLPYLRPDGKAQVTVVYEGDK----PLYVKTVVVSAQHSPEV 205          
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK_THET2 (S-adenosylmethionine synthetase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=metK PE=3 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 5.647e-47
Identity = 108/204 (52.94%), Postives = 127/204 (62.25%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR------PED-IGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQHDETV 698
            L TSESV EGHPDKL D+ISDA+LDA + QD +++VA ET   T +V V GEITT+  VD   +VR T R +G+     G DAD C VL  I++QSPDIA GV+  +  R      P D +GAGDQG MFGYATDET E MPL   LA +L  RL EVRK     +LRPDGK QVTV Y  D     P+ V TV    QH   V
Sbjct:    6 LVTSESVTEGHPDKLADRISDAILDALIAQDKKARVAAETLVTTGLVFVAGEITTEGYVDIPNLVRKTVREVGYTRAKYGFDADTCAVLTAIDEQSPDIAGGVNLSYEWRVLKSTDPLDRVGAGDQGLMFGYATDETPELMPLPITLAHRLTMRLAEVRKTGLLPYLRPDGKAQVTVVYEGDK----PLYVKTVVVSAQHSPEV 205          
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK_PSYA2 (S-adenosylmethionine synthetase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=metK PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.647e-47
Identity = 99/198 (50.00%), Postives = 129/198 (65.15%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQHDETVT 701
            LFTSESV+EGHPDK+ DQISDA+LDA L QD  ++VACET  KT  V++ GEITT A +D E+IVRDT   IG+   D+G D + C V+  + +QSP+IAQGV       PE+ GAGDQG MFGYA++ET   MP     A +L  R +E+R+     WLRPD K Q+T++Y        PV +  V   TQHD +++
Sbjct:    6 LFTSESVSEGHPDKMADQISDAILDAILRQDLHARVACETLVKTGAVILAGEITTTANIDVERIVRDTVNGIGYHHSDLGFDGETCAVINMLGKQSPEIAQGVD---RADPEEQGAGDQGLMFGYASNETEVLMPAPIEYAHRLMERQSELRRAGELPWLRPDAKAQITLKYDGSK----PVAIDAVVLSTQHDPSIS 196          
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK_NOCSJ (S-adenosylmethionine synthetase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=metK PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.647e-47
Identity = 108/201 (53.73%), Postives = 128/201 (63.68%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI------GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQHDE 692
            LFTSESV EGHPDK+ DQISD+VLDA LE DP S+VA ET   T +V+V GE+TT   VD + +VR     IG+ S   G D   C V+V I  QS DIAQGV      R   +      GAGDQG MFGYA D+T   MPL  V+A +L  +LT VRK+ T  +LRPDGKTQVT+EY  +N    PVRV TV   +QHDE
Sbjct:    5 LFTSESVTEGHPDKIADQISDSVLDAMLELDPTSRVAVETLLTTGVVVVAGEVTTTGYVDVKDVVRRRIIEIGYDSSVKGFDGHSCGVMVAIGGQSGDIAQGVDTGHESRTGSVDAMDKQGAGDQGLMFGYACDDTDVLMPLPIVIAQRLAEQLTAVRKDGTLPYLRPDGKTQVTIEYDAENR---PVRVDTVVLSSQHDE 202          
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK_LEIXX (S-adenosylmethionine synthetase OS=Leifsonia xyli subsp. xyli GN=metK PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.647e-47
Identity = 108/200 (54.00%), Postives = 126/200 (63.00%), Query Frame = 3
Query:  108 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPE----DI---GAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQH 686
            LFTSESV EGHPDK+CDQISD++LDA L  D  S+VA ET   T +V V GE+TTK  V+   +VRDT   IG+ S DV  D   C V V+I  QSPDIAQGV      R E    D+   GAGDQG MFG+AT ET ++MPL   LA +L  RL  VRK+ T  +LRPDGKTQVT+ Y       VP  V TV   TQH
Sbjct:    6 LFTSESVTEGHPDKICDQISDSILDALLAVDEHSRVAVETLVTTGLVHVAGEVTTKGYVEIPALVRDTIVEIGYDSSDVSFDGTQCGVSVSIGAQSPDIAQGVDNALETRSERSQDDLDRQGAGDQGIMFGFATTETPQYMPLPIWLAHRLAERLAAVRKDGTLGYLRPDGKTQVTIGY----EGYVPKSVQTVVLSTQH 201          
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK_BURCM (S-adenosylmethionine synthetase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=metK PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.647e-47
Identity = 103/194 (53.09%), Postives = 127/194 (65.46%), Query Frame = 3
Query:  105 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQH 686
            +LFTSESV+EGHPDK+ DQISDA+LDA LEQD  S+VA ET   T +V++ GEITT A +DY +I RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV         D GAGDQG MFGYA DET E MPL   L+ +L  R   +R++    WLRPD K+QVTV Y +      P  + TV   TQH
Sbjct:    5 YLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDN-LDQGAGDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGRLPWLRPDAKSQVTVRYVDGR----PDSIDTVVLSTQH 193          
The following BLAST results are available for this feature:
BLAST of FC876364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BURCH4.324e-4753.09S-adenosylmethionine synthetase OS=Burkholderia ce... [more]
METK_BURCC4.324e-4753.09S-adenosylmethionine synthetase OS=Burkholderia ce... [more]
METK_BURCA4.324e-4753.09S-adenosylmethionine synthetase OS=Burkholderia ce... [more]
METK1_RHOPB4.324e-4748.26S-adenosylmethionine synthetase 1 OS=Rhodopseudomo... [more]
METK_THET85.647e-4752.94S-adenosylmethionine synthetase OS=Thermus thermop... [more]
METK_THET25.647e-4752.94S-adenosylmethionine synthetase OS=Thermus thermop... [more]
METK_PSYA25.647e-4750.00S-adenosylmethionine synthetase OS=Psychrobacter a... [more]
METK_NOCSJ5.647e-4753.73S-adenosylmethionine synthetase OS=Nocardioides sp... [more]
METK_LEIXX5.647e-4754.00S-adenosylmethionine synthetase OS=Leifsonia xyli ... [more]
METK_BURCM5.647e-4753.09S-adenosylmethionine synthetase OS=Burkholderia am... [more]

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Properties
Property NameValue
Genbank descriptionC32003H07EF DevOvary1 Citrus clementina cDNA clone C32003H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876364 ID=FC876364; Name=FC876364; organism=Citrus clementina; type=EST; length=705bp
CAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGA
ATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGA
GACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGT
TGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCAGGAT
CCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCAT
GGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTG
TTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTT
GACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGA
TATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTG
GTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCTCT
GAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCT
CACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGA
AGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCATGGTCCCA
GTCCGTGTCCACACGGTCCCTCATTTCACCCAGCATGATGAGACTGTCAC
AAATG
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