FC876364

Overview
NameFC876364
Unique NameFC876364
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9909 contig Ccv1_Contig9909:8..712. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK_ACACA (S-adenosylmethionine synthetase OS=Acanthamoeba castellanii GN=metK PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.243e-74
Identity = 131/202 (64.85%), Postives = 158/202 (78.22%), Query Frame = 3
Query:   99 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQHDETVTN 704
            +T LFTSE V+E HPDKLCDQ+SDA+LDACL  DP SKVACET +KT MVMVFGEITTK+  DY+K++R+T + IGF    +G D   C +LV IEQQSPDIAQGV  H  +  +D+GAGDQGHMFG+AT+ET EFMP++HVLAT+L  R+TEVR NS  SW+RPD KTQVTVEY N+NG ++P+R HTV    QH E VTN
Sbjct:    5 KTLLFTSECVSESHPDKLCDQVSDAILDACLANDPYSKVACETASKTGMVMVFGEITTKSSFDYQKVIRETVKRIGFTDSSIGFDYKTCNILVAIEQQSPDIAQGV--HVGRSDDDLGAGDQGHMFGHATNETPEFMPMTHVLATRLCQRMTEVRNNSILSWMRPDAKTQVTVEYRNENGTLIPLRRHTVVISVQHSEDVTN 204          
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.072e-72
Identity = 134/203 (66.01%), Postives = 154/203 (75.86%), Query Frame = 3
Query:   96 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQHDETVTN 704
            M ++LFTSESV EGHPDK+CDQ+SDAVLDACL QDP SKVACET TKT MVM+ GEITTKA VDY+K+VR+  + IG+     G D   C VLV IEQQSPDIAQGVH      PEDIGAGDQGHMFGYAT+ET   MPL+H LA++L  +LTE+R N T +W RPD KTQVTVEY  +   + PVRVHT+   TQHDE VTN
Sbjct:    1 MSSYLFTSESVTEGHPDKICDQVSDAVLDACLAQDPLSKVACETATKTGMVMILGEITTKANVDYQKVVREAVKKIGYDDSSKGFDYKTCNVLVAIEQQSPDIAQGVH-IGKVNPEDIGAGDQGHMFGYATNETPTLMPLTHFLASELVNKLTELRHNGTLAWARPDAKTQVTVEYKKEGHKITPVRVHTIVISTQHDEKVTN 202          
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK2_PONAB (S-adenosylmethionine synthetase isoform type-2 OS=Pongo abelii GN=MAT2A PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 4.019e-69
Identity = 128/199 (64.32%), Postives = 153/199 (76.88%), Query Frame = 3
Query:  102 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQHDETV 698
            TFLFTSESV EGHPDK+CDQISDAVLDA L+QDP++KVACET  KT M+++ GEIT++A VDY+K+VR+  + IG+     G D   C VLV +EQQSPDIAQGV  H  +  EDIGAGDQG MFGYATDET E MPL+ VLA KL A+L E+R+N T  WLRPD KTQVTV+Y  D GA++P+RVHT+    QHDE V
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEV 213          
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK2_MACFA (S-adenosylmethionine synthetase isoform type-2 OS=Macaca fascicularis GN=MAT2A PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 4.019e-69
Identity = 128/199 (64.32%), Postives = 153/199 (76.88%), Query Frame = 3
Query:  102 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQHDETV 698
            TFLFTSESV EGHPDK+CDQISDAVLDA L+QDP++KVACET  KT M+++ GEIT++A VDY+K+VR+  + IG+     G D   C VLV +EQQSPDIAQGV  H  +  EDIGAGDQG MFGYATDET E MPL+ VLA KL A+L E+R+N T  WLRPD KTQVTV+Y  D GA++P+RVHT+    QHDE V
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEV 213          
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK2_HUMAN (S-adenosylmethionine synthetase isoform type-2 OS=Homo sapiens GN=MAT2A PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 4.019e-69
Identity = 128/199 (64.32%), Postives = 153/199 (76.88%), Query Frame = 3
Query:  102 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQHDETV 698
            TFLFTSESV EGHPDK+CDQISDAVLDA L+QDP++KVACET  KT M+++ GEIT++A VDY+K+VR+  + IG+     G D   C VLV +EQQSPDIAQGV  H  +  EDIGAGDQG MFGYATDET E MPL+ VLA KL A+L E+R+N T  WLRPD KTQVTV+Y  D GA++P+RVHT+    QHDE V
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAVDYQKVVREAVKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEV 213          
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK2_MOUSE (S-adenosylmethionine synthetase isoform type-2 OS=Mus musculus GN=Mat2a PE=2 SV=2)

HSP 1 Score: 260.766 bits (665), Expect = 5.249e-69
Identity = 127/199 (63.82%), Postives = 153/199 (76.88%), Query Frame = 3
Query:  102 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQHDETV 698
            TFLFTSESV EGHPDK+CDQISDAVLDA L+QDP++KVACET  KT M+++ GEIT++A +DY+K+VR+  + IG+     G D   C VLV +EQQSPDIAQGV  H  +  EDIGAGDQG MFGYATDET E MPL+ VLA KL A+L E+R+N T  WLRPD KTQVTV+Y  D GA++P+RVHT+    QHDE V
Sbjct:   17 TFLFTSESVGEGHPDKICDQISDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAIDYQKVVREAIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVLPIRVHTIVISVQHDEEV 213          
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK2_RAT (S-adenosylmethionine synthetase isoform type-2 OS=Rattus norvegicus GN=Mat2a PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 6.855e-69
Identity = 126/199 (63.32%), Postives = 153/199 (76.88%), Query Frame = 3
Query:  102 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQHDETV 698
            TFLFTSESV EGHPDK+CDQI+DAVLDA L+QDP++KVACET  KT M+++ GEIT++A +DY+K+VR+  + IG+     G D   C VLV +EQQSPDIAQGV  H  +  EDIGAGDQG MFGYATDET E MPL+ VLA KL A+L E+R+N T  WLRPD KTQVTV+Y  D GA++P+RVHT+    QHDE V
Sbjct:   17 TFLFTSESVGEGHPDKICDQINDAVLDAHLQQDPDAKVACETVAKTGMILLAGEITSRAAIDYQKVVREAIKHIGYDDSSKGFDYKTCNVLVALEQQSPDIAQGV--HLDRNEEDIGAGDQGLMFGYATDETEECMPLTIVLAHKLNAKLAELRRNGTLPWLRPDSKTQVTVQYMQDRGAVIPIRVHTIVISVQHDEEV 213          
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK2_YEAST (S-adenosylmethionine synthetase 2 OS=Saccharomyces cerevisiae GN=SAM2 PE=1 SV=3)

HSP 1 Score: 258.07 bits (658), Expect = 3.402e-68
Identity = 127/205 (61.95%), Postives = 155/205 (75.61%), Query Frame = 3
Query:   87 LDKMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQHDETVT 701
            + K +TFLFTSESV EGHPDK+CDQ+SDA+LDACLEQDP SKVACET  KT M+MVFGEITTKA++DY++IVRDT + IG+     G D   C VLV IEQQSPDIAQG+  H+ K  ED+GAGDQG MFGYATDET E +PL+ +LA KL   + + R++ +  WLRPD KTQVTVEY +DNG  VP R+ TV    QH + ++
Sbjct:    1 MSKSKTFLFTSESVGEGHPDKICDQVSDAILDACLEQDPFSKVACETAAKTGMIMVFGEITTKARLDYQQIVRDTIKKIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKSLEDLGAGDQGIMFGYATDETPEGLPLTILLAHKLNMAMADARRDGSLPWLRPDTKTQVTVEYEDDNGRWVPKRIDTVVISAQHADEIS 203          
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK1_YEAST (S-adenosylmethionine synthetase 1 OS=Saccharomyces cerevisiae GN=SAM1 PE=1 SV=2)

HSP 1 Score: 254.603 bits (649), Expect = 3.761e-67
Identity = 127/200 (63.50%), Postives = 151/200 (75.50%), Query Frame = 3
Query:  102 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQHDETVT 701
            TFLFTSESV EGHPDK+CDQ+SDA+LDACL +DP SKVACET  KT M+MVFGEITTKA++DY+KIVRDT + IG+     G D   C VLV IEQQSPDIAQGVH    K  EDIGAGDQG MFGYATDET E +PL+ +LA KL   + + R++ + +WLRPD KTQVTVEY +D+G  VP R+ TV    QH + +T
Sbjct:    4 TFLFTSESVGEGHPDKICDQVSDAILDACLAEDPHSKVACETAAKTGMIMVFGEITTKAQLDYQKIVRDTIKKIGYDDSAKGFDYKTCNVLVAIEQQSPDIAQGVHEE--KDLEDIGAGDQGIMFGYATDETPEGLPLTILLAHKLNMAMADARRDGSLAWLRPDTKTQVTVEYKDDHGRWVPQRIDTVVVSAQHADEIT 201          
BLAST of FC876364 vs. ExPASy Swiss-Prot
Match: METK_SCHPO (S-adenosylmethionine synthetase OS=Schizosaccharomyces pombe GN=sam1 PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 8.380e-67
Identity = 121/201 (60.20%), Postives = 158/201 (78.61%), Query Frame = 3
Query:   99 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETSEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVPHFTQHDETVT 701
            +TFLFTSESV EGHPDK+CDQISDA+LDACL+ DP SKVACET +KT MVMVFGEITT++++DY+K++R+T +SIG+   + G D   C VLV IEQQSPDIAQG+  H+ K  E++GAGDQG MFGYATDET E +PL+ +LA KL A ++  R++ +  WLRPD KTQVT+EY  +NGA++P RV T+    QH ++++
Sbjct:    3 QTFLFTSESVGEGHPDKICDQISDAILDACLKDDPFSKVACETASKTGMVMVFGEITTRSQIDYQKVIRNTIKSIGYDDSEKGFDYKTCNVLVAIEQQSPDIAQGL--HYEKALEELGAGDQGIMFGYATDETPEKLPLTILLAHKLNAAMSVARRDGSLPWLRPDTKTQVTIEYEEENGAVIPRRVDTIVVSAQHADSIS 201          
The following BLAST results are available for this feature:
BLAST of FC876364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ACACA9.243e-7464.85S-adenosylmethionine synthetase OS=Acanthamoeba ca... [more]
METK_DICDI5.072e-7266.01S-adenosylmethionine synthetase OS=Dictyostelium d... [more]
METK2_PONAB4.019e-6964.32S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MACFA4.019e-6964.32S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_HUMAN4.019e-6964.32S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MOUSE5.249e-6963.82S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_RAT6.855e-6963.32S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_YEAST3.402e-6861.95S-adenosylmethionine synthetase 2 OS=Saccharomyces... [more]
METK1_YEAST3.761e-6763.50S-adenosylmethionine synthetase 1 OS=Saccharomyces... [more]
METK_SCHPO8.380e-6760.20S-adenosylmethionine synthetase OS=Schizosaccharom... [more]

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Properties
Property NameValue
Genbank descriptionC32003H07EF DevOvary1 Citrus clementina cDNA clone C32003H07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876364 ID=FC876364; Name=FC876364; organism=Citrus clementina; type=EST; length=705bp
CAAACTCAATTGAGTTCCGCTTTGCTATTGAGGTCTGGTCTTAAGTCTGA
ATCTTAGATCTGCGCCGAAACACTTGCCAGCCACAGCTTGATAAGATGGA
GACCTTTCTATTCACCTCTGAATCTGTGAACGAGGGTCACCCCGACAAGT
TGTGCGACCAGATCTCTGATGCGGTGCTTGACGCCTGCCTTGAGCAGGAT
CCTGAGAGCAAGGTTGCCTGTGAGACATGCACCAAGACCAACATGGTCAT
GGTCTTTGGAGAGATTACCACCAAGGCCAAGGTAGACTATGAGAAGATTG
TTCGCGACACTTGCCGTTCCATTGGATTTGTTTCTGATGATGTGGGTCTT
GACGCCGATCACTGCAAAGTCCTGGTCAATATTGAGCAACAAAGCCCGGA
TATTGCCCAGGGTGTTCATGGCCACTTTACAAAGCGCCCTGAGGACATTG
GTGCTGGTGACCAGGGCCATATGTTTGGTTATGCTACTGATGAGACCTCT
GAATTTATGCCTTTGAGCCATGTCCTTGCCACCAAACTTGGTGCTCGTCT
CACGGAGGTTAGGAAGAATAGTACCTGCTCTTGGCTAAGGCCCGATGGGA
AGACCCAGGTCACTGTTGAGTACTACAACGACAATGGTGCCATGGTCCCA
GTCCGTGTCCACACGGTCCCTCATTTCACCCAGCATGATGAGACTGTCAC
AAATG
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