FC876366

Overview
NameFC876366
Unique NameFC876366
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length753
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9492 contig Ccv1_Contig9492:13..765. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876366 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.925e-33
Identity = 77/208 (37.02%), Postives = 112/208 (53.85%), Query Frame = 1
Query:  142 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE-----VDPALNPDHXPHMLHKCP 747
            L  +FY+ +CP+AE+I+R  V   ++R    A S +R  FHDC VQ CD SLLLD++   ++EK  +  S   R F  ++ IK A+E ECP  VSCAD L L+ RD  V  GGP   +  GRRD   +      + LP+ ++    +  RF+  G++   LVAL GSH++G + C     RLY +      D  L   +   +  +CP
Sbjct:   35 LFPDFYRSSCPRAEEIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKDLPEPDNLFDTIFLRFSNEGLNLTDLVALSGSHTIGFSRCTSFRQRLYNQSGSGSPDTTLEKSYAAILRQRCP 242          
BLAST of FC876366 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 140.198 bits (352), Expect = 1.166e-32
Identity = 77/205 (37.56%), Postives = 107/205 (52.20%), Query Frame = 1
Query:  142 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHXPHMLHKCPDA 753
            L  NFY  +CP     ++  VK           S LR  FHDC V  CD S+LLD T     E+    +    R F  I +IK AVE+ CPGVVSCADIL ++ RD VV LGGP   +K GRRD + +        +P  + S+S ++  F+A+G+    +VAL G+H++G++ CV    R+Y E +  +N          CP A
Sbjct:    2 LTTNFYSTSCPNLLSTVKSGVKSAVSSQPRMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAGPNRNSARGFTVINDIKSAVEKACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCVNFRARVYNETN--INAAFATLRQRSCPRA 204          
BLAST of FC876366 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.166e-32
Identity = 78/208 (37.50%), Postives = 112/208 (53.85%), Query Frame = 1
Query:  142 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE-----VDPALNPDHXPHMLHKCP 747
            L   FY  +CP+A++I++  V   ++       S LR  FHDC V+ CDAS+LLDS+   +SEK  + +    R F  IE IK A+E+ECP  VSCADIL L+ RD  V  GGP   +  GRRD R +        +P  N++   +L +F   G+D   LV+L GSH++G + C     RLY +      D  L+  +   +  +CP
Sbjct:   33 LFPQFYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRNSARGFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCP 240          
BLAST of FC876366 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.166e-32
Identity = 83/209 (39.71%), Postives = 116/209 (55.50%), Query Frame = 1
Query:  142 LVMNFYK--DTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHXPHMLHKCP 747
            LV ++YK  +TC  AE  IR QV+  YK   + A   LR ++ DC V  CD S+LL       SE+   ++ G+  F  I+ IK+ +E  CPGVVSCADIL L+ RD V   G P  P+ TGRRDG    A+ ++  LP  + S+   L  F + G+D   +  LLG+HS+G+THC  +V RLY      + DP +N      + + CP
Sbjct:   35 LVWHYYKLTNTCDDAETYIRYQVEKFYKNDSSIAPKLLRLLYSDCMVNGCDGSILLQGPN---SERTAPQNRGLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAVD--LPSPSISVDESLAYFKSKGLDVLDMTTLLGAHSMGKTHCSYVVDRLYNFKNTGKPDPTMNTTLVSQLRYLCP 238          
BLAST of FC876366 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.166e-32
Identity = 72/187 (38.50%), Postives = 102/187 (54.55%), Query Frame = 1
Query:  142 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVD 699
            L  NFY  TCP+  D ++  V+    + +    S LR  FHDC V  CDAS+LLD T     E+  +     +R    I+NIK  VE  CPGVVSCADI+ ++ RD VV LGGP   +K GRRD + +        +P    S+S ++ +F A G+    +VAL G+H++G+  C     R+Y E +
Sbjct:   27 LSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARCTSFRARIYNETN 213          
BLAST of FC876366 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.166e-32
Identity = 80/198 (40.40%), Postives = 106/198 (53.54%), Query Frame = 1
Query:  142 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY---------PEVDPAL 708
            L   FY ++CP AE I+   V+  + R  +   +  R  FHDC VQ CDASLL+D T   LSEK    +F +R F  I+ IK A+E +CP  VSC+DI+ L+ RD V   GGP   + TGRRDG  S  E   + LP    S+  +L  F   G++    VALLG+H+VG   C   V R+          P +DP L
Sbjct:   23 LKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGPNFSVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMNVFDSVALLGAHTVGIASCGNFVDRVTNFQGTGLPDPSMDPTL 220          
BLAST of FC876366 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.166e-32
Identity = 84/210 (40.00%), Postives = 116/210 (55.24%), Query Frame = 1
Query:  142 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTR-KTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGV-VALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHXPHMLHKCPD 750
            L MNFY ++CP AEDI+R+ V    + +++ A   LR  +HDC V+ CDASLLLDS   K +SEKE   +  +  F  I+ IK  +E+ CP  VSCADIL L+ RD V      P   + TGR DGR S A    + LP    + + + + FA   +D   LVAL G+H++G  HC     RL       + DP+LNP +   +  +C D
Sbjct:   46 LKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARPNLSLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDLDVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLKSECSD 255          
BLAST of FC876366 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.166e-32
Identity = 75/205 (36.59%), Postives = 110/205 (53.66%), Query Frame = 1
Query:  154 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY--------PEVDPALNPDHXPHMLHKC 744
            FY ++CP  E ++R+++        + A   LR  FHDC V+ CD S+LLDS   + +EK+   +  +R F ++E +K AVE+ CPG VSCAD+L L  RD V    GP+  +  GRRDGR S A   +Q LP    + + + + FAA  +D   LV L   H++G +HC     RLY         ++DP L   +   +  KC
Sbjct:   28 FYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKDATPNQTLRGFGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGRVSIANETDQ-LPPPTANFTELTQMFAAKNLDLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLRSKC 231          
BLAST of FC876366 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.392e-32
Identity = 76/183 (41.53%), Postives = 103/183 (56.28%), Query Frame = 1
Query:  142 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 687
            L   FY +TCP A + IR  V+      +  A S +R  FHDC VQ CDAS+LLD T    SEK    + G  R F  IE+ K  VE+ CPGVVSCADIL ++ RD   A+GGP   +K GRRD   +   + E  LP   D ++ ++  FA+ G+    +VAL G+H++G+  C     R+Y
Sbjct:   29 LSATFYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQGCDASILLDETPSIESEKTALPNLGSARGFGIIEDAKREVEKICPGVVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQCFLFRDRIY 211          
BLAST of FC876366 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.430e-32
Identity = 77/190 (40.53%), Postives = 106/190 (55.79%), Query Frame = 1
Query:  124 NEEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSR-AEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 687
            ++ +  L  +FYK++CP    ++R  VK    R      S LR  FHDC V  CD SLLLD T   L EK    S   +R F  I+ IK  VE+ CPG+VSCADIL ++ RD V+ LGGP   +K GRRD   +  A      +P    ++S ++ RF A G+    +VAL G+H++GR  CV   +R+Y
Sbjct:   15 SQSEAQLNRDFYKESCPSLFLVVRRVVKRAVAREPRMGASLLRLFFHDCFVNGCDGSLLLDDTPSFLGEKTSGPSNNSVRGFEVIDKIKFKVEKMCPGIVSCADILAITARDSVLLLGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTRDMVALSGAHTIGRAQCVTFRNRIY 204          
The following BLAST results are available for this feature:
BLAST of FC876366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER14_ARATH8.925e-3337.02Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PERP7_BRARA1.166e-3237.56Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER72_ARATH1.166e-3237.50Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER61_ARATH1.166e-3239.71Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]
PER4_VITVI1.166e-3238.50Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER28_ARATH1.166e-3240.40Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER24_ARATH1.166e-3240.00Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER1_ORYSJ1.166e-3236.59Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PERX_NICSY3.392e-3241.53Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER67_ARATH4.430e-3240.53Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32003H10EF DevOvary1 Citrus clementina cDNA clone C32003H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876366 ID=FC876366; Name=FC876366; organism=Citrus clementina; type=EST; length=753bp
GAAACAAGGTTGGTCACCTTTAGTGAGTGAAGAGTAGAAGAGAAAATGGG
TACGAAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGT
CTCTGAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTATG
AATTTTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAGGGAACA
AGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCTTA
GAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTT
CTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGATGGACAGGAGCTT
TGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAA
GAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATCCTTGTCCTGTCCGGT
AGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGG
AAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCC
CAGATCACAATGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATT
GGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGG
CAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACC
CTGCACTGAACCCTGACCATGNTCCGCATATGCTCCATAAGTGTCCTGAT
GCA
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