FC876368 | Citrus Genome Database

Overview


Name	FC876368
Unique Name	FC876368
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	680

Libraries


Library Name	Type
DevOvary1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_ACTPJ (Enolase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=eno PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.294e-44
Identity = 106/184 (57.61%), Postives = 123/184 (66.85%), Query Frame = 2

Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 640
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV KAVS VN  I  A+ GKD + QT ID  M+  LDGT N     K K GANAILAVSLA  KA A  K +PLY +IAEL+G   +  +P+P  N+INGG HA N + +QEFMI PVGAS+ K+
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTGSREALELRDGDKSRFLGKGVLKAVSAVNNEIAQAILGKDGSAQTEIDQIMI-DLDGTDN-----KSKFGANAILAVSLATAKAAAASKGLPLYAYIAELNGTPGVYSMPLPMMNIINGGEHADNNVDIQEFMIQPVGASTLKE 181

HSP 2 Score: 22.3274 bits (46), Expect = 1.294e-44
Identity = 7/14 (50.00%), Postives = 13/14 (92.86%), Query Frame = 1

Query:  634 QEAMKMGVEVYHHL 675
            +EA+++G EV+H+L
Sbjct:  180 KEALRIGAEVFHNL 193

[Close]

BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_VIBCM (Enolase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=eno PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.294e-44
Identity = 103/184 (55.98%), Postives = 121/184 (65.76%), Query Frame = 2

Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 640
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV KA++ VN  I  AL GKD  +Q  ID  M+  LDGT N     K   GANAILAVSLA  KA A  K +PLY+HIAEL+G   +  +P+P  N+INGG HA N + +QEFMI PVGA + K+
Sbjct:    4 IVKVLGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVLKALAAVNGPIADALVGKDAKDQATIDQIMI-DLDGTEN-----KSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGVFSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAKTLKE 181

HSP 2 Score: 23.483 bits (49), Expect = 1.294e-44
Identity = 8/14 (57.14%), Postives = 13/14 (92.86%), Query Frame = 1

Query:  634 QEAMKMGVEVYHHL 675
            +EA++MG EV+H+L
Sbjct:  180 KEAVRMGAEVFHNL 193

[Close]

BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_VIBCH (Enolase OS=Vibrio cholerae GN=eno PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.294e-44
Identity = 103/184 (55.98%), Postives = 121/184 (65.76%), Query Frame = 2

Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 640
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV KA++ VN  I  AL GKD  +Q  ID  M+  LDGT N     K   GANAILAVSLA  KA A  K +PLY+HIAEL+G   +  +P+P  N+INGG HA N + +QEFMI PVGA + K+
Sbjct:    4 IVKVLGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVLKALAAVNGPIADALVGKDAKDQATIDQIMI-DLDGTEN-----KSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGVFSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAKTLKE 181

HSP 2 Score: 23.483 bits (49), Expect = 1.294e-44
Identity = 8/14 (57.14%), Postives = 13/14 (92.86%), Query Frame = 1

Query:  634 QEAMKMGVEVYHHL 675
            +EA++MG EV+H+L
Sbjct:  180 KEAVRMGAEVFHNL 193

[Close]

BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_VIBC3 (Enolase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=eno PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.294e-44
Identity = 103/184 (55.98%), Postives = 121/184 (65.76%), Query Frame = 2

Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 640
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV KA++ VN  I  AL GKD  +Q  ID  M+  LDGT N     K   GANAILAVSLA  KA A  K +PLY+HIAEL+G   +  +P+P  N+INGG HA N + +QEFMI PVGA + K+
Sbjct:    4 IVKVLGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVLKALAAVNGPIADALVGKDAKDQATIDQIMI-DLDGTEN-----KSNFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGVFSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAKTLKE 181

HSP 2 Score: 23.483 bits (49), Expect = 1.294e-44
Identity = 8/14 (57.14%), Postives = 13/14 (92.86%), Query Frame = 1

Query:  634 QEAMKMGVEVYHHL 675
            +EA++MG EV+H+L
Sbjct:  180 KEAVRMGAEVFHNL 193

[Close]

BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_LACLM (Enolase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=eno PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.294e-44
Identity = 102/187 (54.55%), Postives = 123/187 (65.78%), Query Frame = 2

Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKKP*RW 652
            IT + AR++ DSRGNPT+EV+V T DG   R  VPSGASTG +EA+ELRDG  S Y G G  KAV NVN II  A+ G + T+Q AID  M+  LDGT N     K KLGANAIL VS+A  +A A    +PLY +   L G    VLP P  N+INGGSH+   +A QEFMI+PVGA +FK+  RW
Sbjct:    4 ITDIYAREVLDSRGNPTLEVEVYTEDGAFGRGMVPSGASTGEHEAVELRDGDKSRYNGLGTQKAVDNVNNIIAEAIIGYEVTDQQAIDRAMI-ALDGTEN-----KGKLGANAILGVSIAAARAAADELGVPLYNY---LGGFNAKVLPTPMMNIINGGSHSDAPIAFQEFMIVPVGAPTFKEALRW 181

HSP 2 Score: 24.2534 bits (51), Expect = 1.294e-44
Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = 1

Query:  631 FQEAMKMGVEVYHHLK 678
            F+EA++ G E++H LK
Sbjct:  175 FKEALRWGAEIFHALK 190

[Close]

BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO2_LACLS (Enolase 2 OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=eno2 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.294e-44
Identity = 102/187 (54.55%), Postives = 123/187 (65.78%), Query Frame = 2

Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKKP*RW 652
            IT + AR++ DSRGNPT+EV+V T DG   R  VPSGASTG +EA+ELRDG  S Y G G  KAV NVN II  A+ G + T+Q AID  M+  LDGT N     K KLGANAIL VS+A  +A A    +PLY +   L G    VLP P  N+INGGSH+   +A QEFMI+PVGA +FK+  RW
Sbjct:    4 ITDIYAREVLDSRGNPTLEVEVYTEDGAFGRGMVPSGASTGEHEAVELRDGDKSRYNGLGTQKAVDNVNNIIAEAIIGYEVTDQQAIDRAMI-ALDGTEN-----KGKLGANAILGVSIAAARAAADELGVPLYNY---LGGFNAKVLPTPMMNIINGGSHSDAPIAFQEFMIVPVGAPTFKEALRW 181

HSP 2 Score: 24.2534 bits (51), Expect = 1.294e-44
Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = 1

Query:  631 FQEAMKMGVEVYHHLK 678
            F+EA++ G E++H LK
Sbjct:  175 FKEALRWGAEIFHALK 190

[Close]

BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO1_LACLA (Enolase 1 OS=Lactococcus lactis subsp. lactis GN=eno1 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.294e-44
Identity = 102/187 (54.55%), Postives = 123/187 (65.78%), Query Frame = 2

Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKKP*RW 652
            IT + AR++ DSRGNPT+EV+V T DG   R  VPSGASTG +EA+ELRDG  S Y G G  KAV NVN II  A+ G + T+Q AID  M+  LDGT N     K KLGANAIL VS+A  +A A    +PLY +   L G    VLP P  N+INGGSH+   +A QEFMI+PVGA +FK+  RW
Sbjct:    4 ITDIYAREVLDSRGNPTLEVEVYTEDGAFGRGMVPSGASTGEHEAVELRDGDKSRYNGLGTQKAVDNVNNIIAEAIIGYEVTDQQAIDRAMI-ALDGTEN-----KGKLGANAILGVSIAAARAAADELGVPLYNY---LGGFNAKVLPTPMMNIINGGSHSDAPIAFQEFMIVPVGAPTFKEALRW 181

HSP 2 Score: 24.2534 bits (51), Expect = 1.294e-44
Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = 1

Query:  631 FQEAMKMGVEVYHHLK 678
            F+EA++ G E++H LK
Sbjct:  175 FKEALRWGAEIFHALK 190

[Close]

BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_PROM1 (Enolase OS=Prochlorococcus marinus (strain NATL1A) GN=eno PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.294e-44
Identity = 94/186 (50.54%), Postives = 123/186 (66.13%), Query Frame = 2

Query:   83 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 640
            + + I  + AR++ DSRGNPTVE +V    G + R+ VPSGASTG +EA ELRDGG  YLGKGV KAV+++   I PAL G    +Q  +D+ M +QLD T N     K  LGAN+ILAVS+A  +A A+   +PLY++   L G  + +LPVP  NVINGG HA N L  QEFM++P GA SF++
Sbjct:    5 LELVIDTIMAREVLDSRGNPTVEAEVLLEGGAIGRSIVPSGASTGAHEAHELRDGGKRYLGKGVLKAVNHIEENIAPALCGLSSLDQATVDSVM-KQLDDTDN-----KSNLGANSILAVSMATARAAANGLGLPLYRY---LGGPMSSLLPVPLMNVINGGEHAANNLDFQEFMLVPHGAESFRE 181

HSP 2 Score: 26.9498 bits (58), Expect = 1.294e-44
Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 1

Query:  631 FQEAMKMGVEVYHHLK 678
            F+EA++MG EV+H LK
Sbjct:  179 FREALRMGAEVFHTLK 194

[Close]

BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_EXIS2 (Enolase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=eno PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 1.295e-44
Identity = 100/183 (54.64%), Postives = 119/183 (65.03%), Query Frame = 2

Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 640
            IT + AR+I DSRGNPTVEV+V T DG   RA VPSGASTG +EA+ELRDG  S YLGKGV KAV NVN  + P + G D  +Q  ID  M+  LDGT N     K   GANAIL +S+A  +A A    +PLY +   L G     LP P  N+INGGSHA N +  QEFMI+PVGA +FK+
Sbjct:    4 ITEIYAREILDSRGNPTVEVEVYTEDGGFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVLKAVDNVNEKLAPEIIGYDVFDQAGIDKKMI-DLDGTKN-----KGNFGANAILGISMAAARAAADELGLPLYTY---LGGFNAKTLPTPMMNIINGGSHADNNVDFQEFMIMPVGAPTFKE 177

HSP 2 Score: 26.5646 bits (57), Expect = 1.295e-44
Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 1

Query:  631 FQEAMKMGVEVYHHLK 678
            F+EA++MG E++H LK
Sbjct:  175 FKEALRMGAEIFHALK 190

[Close]

BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_VARPS (Enolase OS=Variovorax paradoxus (strain S110) GN=eno PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.295e-44
Identity = 100/187 (53.48%), Postives = 124/187 (66.31%), Query Frame = 2

Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKKP*RW 652
            I  +  R+I DSRGNPTVE DV    G + RAAVPSGASTG  EA+ELRDG    YLGKGV KAV N+N  I  ++ G D +EQ  +D  M+  LDGT N     K +LGANA LAVS+AV +A A    +PLY++   + G   + LPVP  NVINGG+HA N L +QEFMI+PVGA SF++  R+
Sbjct:    4 IVDIVGREILDSRGNPTVECDVLLESGTMGRAAVPSGASTGSREAIELRDGDKKRYLGKGVLKAVENINTEISESVLGLDASEQAFLDRTMI-DLDGTDN-----KGRLGANATLAVSMAVARAAAEESGLPLYRYFGGMGG---MQLPVPMMNVINGGAHANNSLDLQEFMIIPVGAPSFREAVRY 181

HSP 2 Score: 24.2534 bits (51), Expect = 1.295e-44
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 1

Query:  631 FQEAMKMGVEVYHHLK 678
            F+EA++ G EV+H LK
Sbjct:  175 FREAVRYGAEVFHALK 190

The following BLAST results are available for this feature:

BLAST of FC876368 vs. ExPASy Swiss-Prot

BLAST of FC876368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENO_ACTPJ	1.294e-44	57.61	Enolase OS=Actinobacillus pleuropneumoniae serotyp...	[more]
ENO_VIBCM	1.294e-44	55.98	Enolase OS=Vibrio cholerae serotype O1 (strain M66...	[more]
ENO_VIBCH	1.294e-44	55.98	Enolase OS=Vibrio cholerae GN=eno PE=3 SV=1	[more]
ENO_VIBC3	1.294e-44	55.98	Enolase OS=Vibrio cholerae serotype O1 (strain ATC...	[more]
ENO_LACLM	1.294e-44	54.55	Enolase OS=Lactococcus lactis subsp. cremoris (str...	[more]
ENO2_LACLS	1.294e-44	54.55	Enolase 2 OS=Lactococcus lactis subsp. cremoris (s...	[more]
ENO1_LACLA	1.294e-44	54.55	Enolase 1 OS=Lactococcus lactis subsp. lactis GN=e...	[more]
ENO_PROM1	1.294e-44	50.54	Enolase OS=Prochlorococcus marinus (strain NATL1A)...	[more]
ENO_EXIS2	1.295e-44	54.64	Enolase OS=Exiguobacterium sibiricum (strain DSM 1...	[more]
ENO_VARPS	1.295e-44	53.48	Enolase OS=Variovorax paradoxus (strain S110) GN=e...	[more]

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Properties


Property Name	Value
Genbank description	C32003H12EF DevOvary1 Citrus clementina cDNA clone C32003H12, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC876368 ID=FC876368; Name=FC876368; organism=Citrus clementina; type=EST; length=680bp
GACTTAATCACAAGGCTCTTGTCGCACTCACAGACTCTCTCTCTCGTTCT
AGATCTTTCTTCGCTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACT
GCCGTCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGA
GGTCGACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAA
GCGGTGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGC
TCTGATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGC
CATCATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTA
TTGACAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGT
TGGTGCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGC
TGTCTGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATA
TTGCCGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTC
AATGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGA
GTTTATGATTCTTCCTGTAGGAGCTTCCTCTTTCAAGAAGCCATGAAGAT
GGGTGTAGAAGTATATCACCATCTGAAGGC