FC876368

Overview
NameFC876368
Unique NameFC876368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length680
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC876368_ssr35 microsatellite FC876368_ssr35:35..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:1..681. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_YERP3 (Enolase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=eno PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.733e-44
Identity = 103/184 (55.98%), Postives = 121/184 (65.76%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 640
            I  V  R+I DSRGNPTVE +V    G V  AA PSGASTG  EALELRDG  S +LGKGV KAV+ VN  I  A+ GKD  +Q  ID  M+  LDGT N     K + GANAILAVSLA  KA A  K +PLY+HIAEL+G      +P+P  N+INGG HA N + +QEFMI PVGA + K+
Sbjct:    4 IVKVIGREIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTGSREALELRDGDKSRFLGKGVLKAVAAVNGPIAQAVIGKDAKDQANIDKIMI-DLDGTEN-----KSQFGANAILAVSLAAAKAAAASKGMPLYEHIAELNGTPGKFSMPLPMMNIINGGEHADNNVDIQEFMIQPVGAKTLKE 181          

HSP 2 Score: 23.8682 bits (50), Expect = 3.733e-44
Identity = 8/14 (57.14%), Postives = 13/14 (92.86%), Query Frame = 1
Query:  634 QEAMKMGVEVYHHL 675
            +EA+++G EV+HHL
Sbjct:  180 KEAVRIGSEVFHHL 193          
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_PROM2 (Enolase OS=Prochlorococcus marinus (strain MIT 9215) GN=eno PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 3.733e-44
Identity = 94/182 (51.65%), Postives = 122/182 (67.03%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 640
            I  ++ARQ+ DSRGNPTVE +V    G    A VPSGASTG +EA ELRDGGS Y+GKGV  AV+ ++  I PAL G    +QTA+D  M  ++DGT+N     K  LGAN+ILAVSLA  +A A+   IPLY+++ +   N   +LPVP  NVINGG+HA N L  QEFM++P G ++F +
Sbjct:    9 IDTIEARQVLDSRGNPTVEAEVFLECGASGIAIVPSGASTGAHEAHELRDGGSKYMGKGVLSAVNKIHETISPALCGLSALDQTAVDKLMT-EIDGTLN-----KSNLGANSILAVSLATARASANALDIPLYRYLGDPLSN---LLPVPLMNVINGGAHAPNSLDFQEFMLVPHGVNNFSE 181          

HSP 2 Score: 25.409 bits (54), Expect = 3.733e-44
Identity = 8/16 (50.00%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  631 FQEAMKMGVEVYHHLK 678
            F E+++MG E++H LK
Sbjct:  179 FSESLRMGTEIFHSLK 194          
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_CHRSD (Enolase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=eno PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 3.733e-44
Identity = 102/184 (55.43%), Postives = 121/184 (65.76%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 640
            I  + A ++ DSRGNPTV+ DV  + G    A  PSGASTG  EALELRDG  S YLGKGV KAV  VN  I  AL GKD  +Q A+D  M+ +LDGT N+ G     LGANAILAVSLA  KA A  K +PLY HIA+L G      +PVP  N++NGG HA N + +QEFMI PVGA SF++
Sbjct:    4 IKDIHALEVLDSRGNPTVQADVVLASGVRGTACAPSGASTGSREALELRDGDTSRYLGKGVLKAVEAVNGRIRDALVGKDALDQRALDAAML-ELDGTDNKAG-----LGANAILAVSLAAAKAAAIEKGVPLYAHIADLYGQSGQFRMPVPMMNILNGGEHADNNVDIQEFMIQPVGAPSFRE 181          

HSP 2 Score: 26.5646 bits (57), Expect = 3.733e-44
Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  631 FQEAMKMGVEVYHHLK 678
            F+EA++MG E++H LK
Sbjct:  179 FREALRMGAEIFHALK 194          
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_VEREI (Enolase OS=Verminephrobacter eiseniae (strain EF01-2) GN=eno PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.734e-44
Identity = 98/187 (52.41%), Postives = 125/187 (66.84%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKKP*RW 652
            I  +  R++ DSRGNPTVE DV    G + RAAVPSGASTG  EA+E+RDG    Y GKGV KAV +VN  I  A+ G D +EQ  +D  ++  LDGT N     K +LGANA+LAVS+AV +A A    +PLY++   L G  ++ LPVP  NVINGG+HA N L +QEFMI+PVGA +F++  RW
Sbjct:    4 IVDIVGREVLDSRGNPTVECDVLLESGVMGRAAVPSGASTGSREAIEMRDGDPRRYQGKGVLKAVEHVNTEISEAVLGLDASEQAFLDKTLI-DLDGTEN-----KSRLGANAMLAVSMAVARAAAEESGLPLYRY---LGGMGSVQLPVPMMNVINGGAHANNSLDLQEFMIIPVGAPNFREALRW 181          

HSP 2 Score: 24.6386 bits (52), Expect = 3.734e-44
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  631 FQEAMKMGVEVYHHLK 678
            F+EA++ G EV+H LK
Sbjct:  175 FREALRWGAEVFHALK 190          
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_RHOSR (Enolase OS=Rhodococcus sp. (strain RHA1) GN=eno PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.734e-44
Identity = 96/186 (51.61%), Postives = 124/186 (66.67%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKKP*RW 652
            I  V AR+I DSRGNPTVEV+V   DG  ARAAVPSGASTG +EA+ELRDGG  Y GKGV KAV  V + I PA+ G D TEQ  +D  ++   DGT +     K +LGANA+L  SLAV +A A    + L++++    G    VLPVP  N++NGG+HA   + +QEFM+ P+GA++FK+  RW
Sbjct:    4 IEQVGAREILDSRGNPTVEVEVLLDDGSFARAAVPSGASTGEHEAVELRDGGDRYGGKGVEKAVEAVLSEIAPAIIGIDATEQRTVDQALL-DADGTPD-----KSRLGANALLGASLAVARAAAESSGLDLFRYV---GGPNAHVLPVPMMNILNGGAHADTGVDVQEFMVAPIGAATFKESLRW 180          

HSP 2 Score: 25.0238 bits (53), Expect = 3.734e-44
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  631 FQEAMKMGVEVYHHLK 678
            F+E+++ G EVYH LK
Sbjct:  174 FKESLRWGAEVYHALK 189          
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_NOCFA (Enolase OS=Nocardia farcinica GN=eno PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.734e-44
Identity = 99/190 (52.11%), Postives = 126/190 (66.32%), Query Frame = 2
Query:   83 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKKP*RW 652
            MAI I  V AR+I DSRGNPTVEV++   DG + RAAVPSGASTG +EA+ELRDGG  Y GKGV KAV  V   I PA+ G D  EQ  +D  ++  LDGT +     K +LGANA+L VSLAV +A A    + L+++   L G    VLPVP  N++NGG+HA   + +QEFM+ P+GA +FK+  RW
Sbjct:    1 MAI-IEQVGAREILDSRGNPTVEVEIALDDGTLTRAAVPSGASTGEHEAVELRDGGDRYNGKGVLKAVEGVLDEIAPAVIGLDAVEQRTVDQVLL-DLDGTPD-----KSRLGANALLGVSLAVARAAAESSGLELFRY---LGGPNAHVLPVPMMNILNGGAHADTGVDVQEFMVAPIGAPTFKESLRW 180          

HSP 2 Score: 25.0238 bits (53), Expect = 3.734e-44
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  631 FQEAMKMGVEVYHHLK 678
            F+E+++ G EVYH LK
Sbjct:  174 FKESLRWGAEVYHALK 189          
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_ACIF5 (Enolase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=eno PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.734e-44
Identity = 99/182 (54.40%), Postives = 119/182 (65.38%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 640
            I  ++AR++ DSRGNPTVE +V   +G + RA VPSGASTG  EA+ELRDGG  Y GKGV KAV +VN  I  AL G +  EQ  ID  +   LDGT N     K +LGANAIL+VSLA   A AH    PLY++I  L     L LPVP  NVINGG+HA N + MQEFM++P GA SF +
Sbjct:    4 IVRIQAREVLDSRGNPTVEAEVYLDNGGMGRAIVPSGASTGEREAVELRDGGQRYGGKGVRKAVEHVNGEIQDALLGMEAEEQEHIDAALC-ALDGTEN-----KARLGANAILSVSLATAHAAAHAAGQPLYRYIGGLG---PLQLPVPMMNVINGGAHADNDVDMQEFMLIPAGAESFSE 176          

HSP 2 Score: 28.1054 bits (61), Expect = 3.734e-44
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  631 FQEAMKMGVEVYHHLK 678
            F EA++MGVEV+H LK
Sbjct:  174 FSEALQMGVEVFHSLK 189          
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_ACIF2 (Enolase OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=eno PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.734e-44
Identity = 99/182 (54.40%), Postives = 119/182 (65.38%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 640
            I  ++AR++ DSRGNPTVE +V   +G + RA VPSGASTG  EA+ELRDGG  Y GKGV KAV +VN  I  AL G +  EQ  ID  +   LDGT N     K +LGANAIL+VSLA   A AH    PLY++I  L     L LPVP  NVINGG+HA N + MQEFM++P GA SF +
Sbjct:    4 IVRIQAREVLDSRGNPTVEAEVYLDNGGMGRAIVPSGASTGEREAVELRDGGQRYGGKGVRKAVEHVNGEIQDALLGMEAEEQEHIDAALC-ALDGTEN-----KARLGANAILSVSLATAHAAAHAAGQPLYRYIGGLG---PLQLPVPMMNVINGGAHADNDVDMQEFMLIPAGAESFSE 176          

HSP 2 Score: 28.1054 bits (61), Expect = 3.734e-44
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  631 FQEAMKMGVEVYHHLK 678
            F EA++MGVEV+H LK
Sbjct:  174 FSEALQMGVEVFHSLK 189          
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_THEM4 (Enolase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=eno PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.178e-44
Identity = 104/191 (54.45%), Postives = 129/191 (67.54%), Query Frame = 2
Query:   83 MAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKKP*RW 652
            M I I  + AR++ DSRGNPTVEV+V   DG V RA VPSGASTG +EALELRD  S  Y GKGV KA+ NVN  I P L G +  EQ +ID  ++ ++DGT N     K  +GANAIL VS+AV +A A+  ++PLYK+   L G    VLPVP  NVINGG+HA N L +QEFMI+P GA SF++  R+
Sbjct:    1 MYIEIIDIYAREVLDSRGNPTVEVEVMLEDGSVGRAIVPSGASTGKFEALELRDKDSKRYGGKGVLKAIENVNEKIAPKLLGLNAYEQVSIDKTLL-EIDGTEN-----KSNIGANAILGVSMAVSRAVANSLQLPLYKY---LGGVNAKVLPVPLMNVINGGAHADNNLDIQEFMIVPAGAPSFREALRY 182          
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_ERYLH (Enolase OS=Erythrobacter litoralis (strain HTCC2594) GN=eno PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.178e-44
Identity = 100/187 (53.48%), Postives = 123/187 (65.78%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKKP*RW 652
            I  + AR+I DSRGNPTVEVDV   DG   RAAVPSGASTG +EA+ELRDG    YLGKGV++AV  VN  I   L G D  +Q  ID  M+  LDGT N     K KLGANAIL  SLAV KA A  + +PL+ ++  +S +   +LPVP  N++NGG HA N + +QEFM++PVGA S  +  RW
Sbjct:    4 IIDLHAREILDSRGNPTVEVDVLLEDGSFGRAAVPSGASTGAHEAIELRDGDQGRYLGKGVTRAVDAVNTTIADTLLGLDAEDQRDIDTVML-DLDGTPN-----KAKLGANAILGTSLAVAKAAAAARGMPLWAYVGGVSAH---MLPVPMMNIVNGGEHADNPIDIQEFMVMPVGADSLAEAVRW 181          
The following BLAST results are available for this feature:
BLAST of FC876368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_YERP33.733e-4455.98Enolase OS=Yersinia pseudotuberculosis serotype O:... [more]
ENO_PROM23.733e-4451.65Enolase OS=Prochlorococcus marinus (strain MIT 921... [more]
ENO_CHRSD3.733e-4455.43Enolase OS=Chromohalobacter salexigens (strain DSM... [more]
ENO_VEREI3.734e-4452.41Enolase OS=Verminephrobacter eiseniae (strain EF01... [more]
ENO_RHOSR3.734e-4451.61Enolase OS=Rhodococcus sp. (strain RHA1) GN=eno PE... [more]
ENO_NOCFA3.734e-4452.11Enolase OS=Nocardia farcinica GN=eno PE=3 SV=1[more]
ENO_ACIF53.734e-4454.40Enolase OS=Acidithiobacillus ferrooxidans (strain ... [more]
ENO_ACIF23.734e-4454.40Enolase OS=Acidithiobacillus ferrooxidans (strain ... [more]
ENO_THEM44.178e-4454.45Enolase OS=Thermosipho melanesiensis (strain BI429... [more]
ENO_ERYLH4.178e-4453.48Enolase OS=Erythrobacter litoralis (strain HTCC259... [more]

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Properties
Property NameValue
Genbank descriptionC32003H12EF DevOvary1 Citrus clementina cDNA clone C32003H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876368 ID=FC876368; Name=FC876368; organism=Citrus clementina; type=EST; length=680bp
GACTTAATCACAAGGCTCTTGTCGCACTCACAGACTCTCTCTCTCGTTCT
AGATCTTTCTTCGCTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACT
GCCGTCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGA
GGTCGACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAA
GCGGTGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGC
TCTGATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGC
CATCATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTA
TTGACAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGT
TGGTGCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGC
TGTCTGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATA
TTGCCGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTC
AATGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGA
GTTTATGATTCTTCCTGTAGGAGCTTCCTCTTTCAAGAAGCCATGAAGAT
GGGTGTAGAAGTATATCACCATCTGAAGGC
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