FC876368

Overview
NameFC876368
Unique NameFC876368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length680
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC876368_ssr35 microsatellite FC876368_ssr35:35..44. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10339 contig Ccv1_Contig10339:1..681. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_PYRKO (Enolase OS=Pyrococcus kodakaraensis GN=eno PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.135e-49
Identity = 114/187 (60.96%), Postives = 131/187 (70.05%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKKP*RWV 655
            IT V AR+I DSRGNPTVEV+V T    + RAAVPSGASTG +EALELRDGGS Y GKGV +AV NVN II P + G D T Q  ID  M+ +LDGT N     K  LGANAIL VSLAV KA A+   +PLY++I    G    V+PVP  NVINGG HAGN+L  QEFMI+PVGA SF++  RWV
Sbjct:    7 ITNVIAREILDSRGNPTVEVEVYTPIS-MGRAAVPSGASTGTHEALELRDGGSRYHGKGVRRAVENVNKIIAPEIIGMDVTWQRDIDTLML-ELDGTEN-----KSNLGANAILGVSLAVAKAAANALGLPLYQYI---GGTNAYVMPVPMSNVINGGVHAGNELDFQEFMIMPVGADSFREAIRWV 183          
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_CARHZ (Enolase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=eno PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.463e-49
Identity = 105/183 (57.38%), Postives = 128/183 (69.95%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 640
            I  V AR+I DSRGNPTVEVDV   DG   RAAVPSGASTG +EA+ELRD     YLGKGV++AV NVN+IIGP + G D  +Q  ID Y++ +LDGT N     K KLGANAIL VS+AV KA A+   +PLY++   L G    VLP P  N++NGG HA N + +QEFMI+P+GASSF +
Sbjct:    4 IREVIAREILDSRGNPTVEVDVILEDGTWGRAAVPSGASTGAFEAVELRDNDPQRYLGKGVTQAVENVNSIIGPEILGFDALDQVGIDEYLI-ELDGTPN-----KGKLGANAILGVSMAVAKAAANYLGLPLYRY---LGGTNARVLPAPMMNILNGGKHADNNVDIQEFMIMPLGASSFSE 177          

HSP 2 Score: 27.7202 bits (60), Expect = 1.463e-49
Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  631 FQEAMKMGVEVYHHLK 678
            F EA++MG EV+H+LK
Sbjct:  175 FSEALRMGAEVFHNLK 190          
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_PYRAB (Enolase OS=Pyrococcus abyssi GN=eno PE=3 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.483e-49
Identity = 113/187 (60.43%), Postives = 131/187 (70.05%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKKP*RWV 655
            I AV AR+I DSRGNPTVEVDV T    + RAAVPSGASTG +EA+ELRDGG  Y GKGV +AV NVN II P L G D   Q  ID  ++ +LDGT N     K  LGANAILAVSLAV KA A+  ++PLY++   L G    VLPVP  NVINGG HAGN L  QEFMI+P+GA+SF++  RWV
Sbjct:    7 IVAVIAREILDSRGNPTVEVDVHTPIS-MGRAAVPSGASTGTHEAVELRDGGKRYHGKGVRRAVENVNKIIAPELVGMDVRWQREIDRLLI-ELDGTEN-----KSNLGANAILAVSLAVAKAAANALELPLYQY---LGGVNAYVLPVPLSNVINGGVHAGNDLDFQEFMIMPIGANSFREAIRWV 183          
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_ANATD (Enolase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=eno PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.483e-49
Identity = 107/188 (56.91%), Postives = 133/188 (70.74%), Query Frame = 2
Query:   80 KMAITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSD-YLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 640
            K+ ++ITAVKAR+I DSRGNPTVEV+V  +D  V RAAVPSGASTGI+EA+ELRDG    Y+GKGV KAV NVN +I P + G +   Q  ID  M+ +LDGT N     K KLGANAIL VSLAV KA A+   +PLY++I  ++      LPVP  N++NGG HA N + +QEFMI+PVGA SF +
Sbjct:    2 KVDLSITAVKAREILDSRGNPTVEVEVVVNDEFVGRAAVPSGASTGIFEAVELRDGDKKRYMGKGVLKAVENVNEVIAPEIIGMNALNQVEIDKLMI-ELDGTEN-----KSKLGANAILGVSLAVAKAAANALGLPLYQYIGGVNAK---YLPVPMMNILNGGKHADNSVDLQEFMIMPVGAKSFSE 180          
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_PSYWF (Enolase OS=Psychrobacter sp. (strain PRwf-1) GN=eno PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.906e-49
Identity = 104/186 (55.91%), Postives = 131/186 (70.43%), Query Frame = 2
Query:   86 AITITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKK 640
            A+ I  ++AR+I DSRGNPT+E DV  +DG + RAA PSGASTG  EALELRDG  S YLGKGV+KAV+NVN+ I  AL   D T+Q  IDN +++ LDGT N     K  LGANA+LAVSLA  KA A  + +PL+++IA L G  +L +PVP  N++NGG HA N + +QEFMI P G SSF +
Sbjct:    9 AVEIQDIRAREILDSRGNPTIEADVILADGSMGRAAAPSGASTGSREALELRDGDKSRYLGKGVTKAVANVNSQIRSALLESDATDQQGIDNILIE-LDGTAN-----KDHLGANAMLAVSLATAKAAAISQNLPLHQYIANLRGQTSLTMPVPMMNILNGGEHADNTVDIQEFMIEPTGFSSFSE 188          

HSP 2 Score: 25.7942 bits (55), Expect = 1.906e-49
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  631 FQEAMKMGVEVYHHLK 678
            F EA++ GVE++H LK
Sbjct:  186 FSEALRAGVEIFHSLK 201          
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_GRAFK (Enolase OS=Gramella forsetii (strain KT0803) GN=eno PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.907e-49
Identity = 107/180 (59.44%), Postives = 125/180 (69.44%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF 634
            I  + ARQIFDSRGNPTVEVDV T +G + RAAVPSGASTG +EA+ELRDGG D++GKGV KAV NVN  I   L G    EQ  ID  M+  LDGT N     K KLGANAIL VSLAV KA A+   +PLY+++  +S N    LPVP  N+INGGSH+   +A QEFMI+PV A SF
Sbjct:    4 ILDIHARQIFDSRGNPTVEVDVYTENGIMGRAAVPSGASTGEHEAVELRDGGKDFMGKGVQKAVDNVNGEIADHLLGFSVFEQNLIDQTMI-DLDGTPN-----KSKLGANAILGVSLAVAKAAANELNMPLYRYVGGVSAN---TLPVPMMNIINGGSHSDAPIAFQEFMIMPVMADSF 174          

HSP 2 Score: 26.5646 bits (57), Expect = 1.907e-49
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  631 FQEAMKMGVEVYHHLK 678
            F  A+KMG E++H+LK
Sbjct:  174 FSHALKMGTEIFHNLK 189          
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_PSEMY (Enolase OS=Pseudomonas mendocina (strain ymp) GN=eno PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.907e-49
Identity = 105/182 (57.69%), Postives = 124/182 (68.13%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLV-LPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF 634
            I  +K R++ DSRGNPTVE DV    G V  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKD T+Q A+D  M+ +LDGT N     K KLGANAILAVSLA  KA A  K +PLY HIA+L+G   +  +PVP  N+INGG HA N + +QEFM+ PVGA +F
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVILEGGIVGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRDLLLGKDATDQQALDRAMI-ELDGTEN-----KAKLGANAILAVSLAAAKAAAQAKGVPLYAHIADLNGTPGVYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKNF 179          

HSP 2 Score: 28.4906 bits (62), Expect = 1.907e-49
Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  631 FQEAMKMGVEVYHHLK 678
            F +A++MG E++HHLK
Sbjct:  179 FADALRMGAEIFHHLK 194          
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_THEGJ (Enolase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=eno PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.936e-49
Identity = 113/187 (60.43%), Postives = 131/187 (70.05%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGGSDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNKNLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFKKP*RWV 655
            ITAV AR+I DSRGNPTVEV+V T    + RAAVPSGASTG +EALELRDGG  + GKGV +AV NVN II P + G D T Q  ID  M+ +LDGT N     K  LGANAIL VSLAV KA A+   +PLY++I    G    V+PVP  NVINGG HAGN+L  QEFMI+PVGA SF++  RWV
Sbjct:    7 ITAVVAREILDSRGNPTVEVEVYTPVS-MGRAAVPSGASTGTHEALELRDGGKRFHGKGVRRAVENVNKIIAPEIIGMDVTWQRDIDMLMI-ELDGTEN-----KSNLGANAILGVSLAVAKAAANALGLPLYQYI---GGTNAYVMPVPMSNVINGGVHAGNELDFQEFMIMPVGAKSFREGIRWV 183          
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_PSEAE (Enolase OS=Pseudomonas aeruginosa GN=eno PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 3.239e-49
Identity = 104/182 (57.14%), Postives = 124/182 (68.13%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF 634
            I  +K R++ DSRGNPTVE DV   +G V  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKD  +Q A+D+ M+ +LDGT N     K KLGANAILAVSLA  KA A  K +PLY HIA+L+G      +PVP  N+INGG HA N + +QEFM+ PVGA +F
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVILDNGIVGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRDLLLGKDAADQKALDHAMI-ELDGTEN-----KAKLGANAILAVSLAAAKAAAQAKGVPLYAHIADLNGTPGQYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKNF 179          

HSP 2 Score: 29.6462 bits (65), Expect = 3.239e-49
Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  631 FQEAMKMGVEVYHHLK 678
            F EA++MG E++HHLK
Sbjct:  179 FAEALRMGAEIFHHLK 194          
BLAST of FC876368 vs. ExPASy Swiss-Prot
Match: ENO_PSEAB (Enolase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=eno PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 3.239e-49
Identity = 104/182 (57.14%), Postives = 124/182 (68.13%), Query Frame = 2
Query:   95 ITAVKARQIFDSRGNPTVEVDVTTSDGHVARAAVPSGASTGIYEALELRDGG-SDYLGKGVSKAVSNVNAIIGPALAGKDPTEQTAIDNYMVQQLDGTVNEWGWCKQKLGANAILAVSLAVCKAGAHVKKIPLYKHIAELSGNK-NLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSF 634
            I  +K R++ DSRGNPTVE DV   +G V  A  PSGASTG  EALELRDG  S YLGKGV KAV+N+N  I   L GKD  +Q A+D+ M+ +LDGT N     K KLGANAILAVSLA  KA A  K +PLY HIA+L+G      +PVP  N+INGG HA N + +QEFM+ PVGA +F
Sbjct:    4 IVDIKGREVLDSRGNPTVEADVILDNGIVGSACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINGPIRDLLLGKDAADQKALDHAMI-ELDGTEN-----KAKLGANAILAVSLAAAKAAAQAKGVPLYAHIADLNGTPGQYSMPVPMMNIINGGEHADNNVDIQEFMVQPVGAKNF 179          

HSP 2 Score: 29.6462 bits (65), Expect = 3.239e-49
Identity = 10/16 (62.50%), Postives = 14/16 (87.50%), Query Frame = 1
Query:  631 FQEAMKMGVEVYHHLK 678
            F EA++MG E++HHLK
Sbjct:  179 FAEALRMGAEIFHHLK 194          
The following BLAST results are available for this feature:
BLAST of FC876368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_PYRKO1.135e-4960.96Enolase OS=Pyrococcus kodakaraensis GN=eno PE=3 SV... [more]
ENO_CARHZ1.463e-4957.38Enolase OS=Carboxydothermus hydrogenoformans (stra... [more]
ENO_PYRAB1.483e-4960.43Enolase OS=Pyrococcus abyssi GN=eno PE=3 SV=2[more]
ENO_ANATD1.483e-4956.91Enolase OS=Anaerocellum thermophilum (strain DSM 6... [more]
ENO_PSYWF1.906e-4955.91Enolase OS=Psychrobacter sp. (strain PRwf-1) GN=en... [more]
ENO_GRAFK1.907e-4959.44Enolase OS=Gramella forsetii (strain KT0803) GN=en... [more]
ENO_PSEMY1.907e-4957.69Enolase OS=Pseudomonas mendocina (strain ymp) GN=e... [more]
ENO_THEGJ1.936e-4960.43Enolase OS=Thermococcus gammatolerans (strain DSM ... [more]
ENO_PSEAE3.239e-4957.14Enolase OS=Pseudomonas aeruginosa GN=eno PE=3 SV=1[more]
ENO_PSEAB3.239e-4957.14Enolase OS=Pseudomonas aeruginosa (strain UCBPP-PA... [more]

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Properties
Property NameValue
Genbank descriptionC32003H12EF DevOvary1 Citrus clementina cDNA clone C32003H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876368 ID=FC876368; Name=FC876368; organism=Citrus clementina; type=EST; length=680bp
GACTTAATCACAAGGCTCTTGTCGCACTCACAGACTCTCTCTCTCGTTCT
AGATCTTTCTTCGCTTTTCCAGCTTTCAGAAAATGGCAATAACCATCACT
GCCGTCAAAGCCAGGCAGATCTTTGACAGCCGTGGAAATCCAACGGTGGA
GGTCGACGTGACAACATCAGATGGCCACGTGGCTAGAGCTGCTGTTCCAA
GCGGTGCATCCACCGGAATTTATGAGGCGCTTGAACTAAGAGACGGAGGC
TCTGATTACCTAGGCAAGGGTGTATCGAAGGCTGTTAGCAATGTCAACGC
CATCATTGGCCCTGCACTCGCTGGCAAGGACCCAACTGAGCAGACTGCTA
TTGACAACTATATGGTACAACAACTTGATGGAACTGTAAATGAGTGGGGT
TGGTGCAAACAGAAGCTTGGAGCAAACGCCATTTTGGCTGTCTCCCTAGC
TGTCTGCAAGGCTGGTGCACATGTCAAGAAGATTCCTCTTTACAAGCATA
TTGCCGAACTCTCTGGTAACAAGAATTTGGTGTTGCCAGTGCCAGCATTC
AATGTCATTAATGGTGGATCACATGCTGGAAACAAACTTGCTATGCAGGA
GTTTATGATTCTTCCTGTAGGAGCTTCCTCTTTCAAGAAGCCATGAAGAT
GGGTGTAGAAGTATATCACCATCTGAAGGC
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