FC876372

Overview
NameFC876372
Unique NameFC876372
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14609 contig Ccv1_Contig14609:337..1046. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.332e-54
Identity = 106/200 (53.00%), Postives = 141/200 (70.50%), Query Frame = 2
Query:   59 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECS---LDASGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQ 649
            D++  +A QL   +VLPMA+++  EL + EI+ K   G+ +  ++IA++L TKN +AP+MLDRILRLL SYSV+ CS   L   G  R+Y L  V KY   N+DGV +  L  MNQDKVL+ESW  LKDAIL+GGIPFN+A+G+  FEY G DPRFNK FN  M N++++ M  ILE+YKGF+ +  LVDVGG +G TL+
Sbjct:   17 DEAALFAMQLASASVLPMALKSALELDLLEIMAK--NGSPMSPTEIASKLPTKNPEAPVMLDRILRLLTSYSVLTCSNRKLSGDGVERIYGLGPVCKYLTKNEDGVSIAALCLMNQDKVLMESWYHLKDAILDGGIPFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLK 214          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.332e-54
Identity = 108/199 (54.27%), Postives = 140/199 (70.35%), Query Frame = 2
Query:   59 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLD--ASG-ARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            +++  +A QL   +VLPM ++A  EL + EI+ K GPG  L  +DIA+QL TKN DAP+MLDR+LRLLASYS++  SL   A G   RLY L  V K+   N++GV + PL  MNQDKVLLESW  LKDA+LEGGIPFN+A+G+  FEY G DPRFNK FN  M +++++ M  ILE+YKGF+ +  +VDVGG  G  L
Sbjct:   17 EEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTKNPDAPVMLDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVL 215          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.360e-53
Identity = 104/199 (52.26%), Postives = 139/199 (69.85%), Query Frame = 2
Query:   59 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSL---DASGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            +++  +A QL   +VLPM ++A  EL + EI+ K GPGA L   ++AAQL T+N +AP+MLDRI RLLASYSV+ C+L         RLY L  V K+ V N+DGV +  L  MNQDK+L+ESW  LKDA+LEGGIPFN+A+G+  FEY G DPRFNK FN  M +++++ M  ILE+YKGF+ ++ +VDVGG  G  L
Sbjct:   18 EEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPGEVAAQLPTQNPEAPVMLDRIFRLLASYSVLTCTLRNLPDGKVERLYGLAPVCKFLVKNEDGVSIAALNLMNQDKILMESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKIFNRGMSDHSTITMKKILETYKGFEGLETVVDVGGGTGAVL 216          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.660e-52
Identity = 101/199 (50.75%), Postives = 140/199 (70.35%), Query Frame = 2
Query:   59 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDASG---ARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            +++  +A QL   +VLPM +++  EL + EI+ K GPGA++   +IA+QL T N DAP+MLDR+LRLLA Y ++ CS+        +RLY L +V+KY V N+DGV +  L  MNQDKVL+ESW  LKDA+L+GGIPFN+A+G+  FEY G DPRFNK FN  M +++++ M  ILE+Y GF+ +K LVDVGG  G  +
Sbjct:   17 EEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVI 215          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.740e-52
Identity = 101/199 (50.75%), Postives = 138/199 (69.35%), Query Frame = 2
Query:   59 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            +++  +A QL   +VLPM ++A  EL + EI+ K GPGA L  +D+A+QL TKN +AP+MLDR+LRLLASYS++  SL         RLY L  V K+   N+DGV +  L  MNQDKVL+ESW  LKDA+L+GGIPFN+A+G+  F+Y G DPRFNK FN  M +++++ M  ILE+YKGF+ +  +VDVGG  G  +
Sbjct:   17 EEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVV 215          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.724e-51
Identity = 101/194 (52.06%), Postives = 135/194 (69.59%), Query Frame = 2
Query:   74 YASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSL---DASGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            +A QL   +VLP  + A  EL + EI+ + GPGA L   ++A+QL T+N DAP+MLDRI RLLASYSV+ C+L         RLY L  + K+ V N+DGV L PL  ++QD+V LESW  +KDAILEGGIPF++AHG+  F+Y G DPRFNK FN AM ++++++M  ILE+Y GF+ +K +VDVGG  G  L
Sbjct:    4 FAMQLATASVLPAVLTAAIELDLLEIMARAGPGAYLTPGEVASQLPTQNPDAPVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAIL 197          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.552e-51
Identity = 106/202 (52.48%), Postives = 135/202 (66.83%), Query Frame = 2
Query:   59 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKV---GPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            +++  +A QL   +VLPM ++A  EL + EI+ K    G GA +  ++IAAQL T N DAP+MLDR+LRLLASYSVV CSL         RLY L  V K+   N+DGV L PL  MNQDKVL+ESW  LKDAIL+GGIPFN+A+G+  FEY G DPRFNK FN  M +++++ M  I E Y GF+ +  +VDVGG  G  L
Sbjct:   19 EEANLFAMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQLPTTNPDAPVMLDRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCKFLTKNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALNTIVDVGGGTGAVL 220          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.462e-50
Identity = 99/200 (49.50%), Postives = 133/200 (66.50%), Query Frame = 2
Query:   59 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQL-LTKNKDAPMMLDRILRLLASYSVVECSLDASG---ARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            DQ+F +A QL   +VLPM ++   EL + E + K GP   + +S++ AQL    N +AP+M+DRI  LLASYSV+ C+L  +    A R Y L  V K+ + N  GV L PLL MNQDKVL+ESW  LKD +L+GGIPFN+A+G+  FEY G D RFNK FN+ M+N++++ M  I+E Y GF  +K LVDVGG  G +L
Sbjct:    7 DQAFLFAMQLASASVLPMVLKTAIELDLLETIAKAGPHGSVSSSELVAQLPKVNNPEAPVMIDRICSLLASYSVLTCTLKETADGCAERFYGLAPVCKFLIKNDAGVSLAPLLLMNQDKVLMESWYYLKDPVLDGGIPFNKAYGMSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIVELYNGFSGLKTLVDVGGGTGASL 206          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.577e-47
Identity = 94/191 (49.21%), Postives = 129/191 (67.54%), Query Frame = 2
Query:   74 YASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDASGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            +A QL   +VLPM +++  EL + EI+   G    +  ++IA+ L T N DAP M+DRILRLL+ YSVV CS+ +   +R+Y L  V KY   N+DGV +  L  MNQDKVL+ESW  LKDA+L+GGIPFN+A+G+  FEY G DPRFNK FN  M +++++ M  + ++Y+GF  +  LVDVGG  G TL
Sbjct:    3 FAMQLACASVLPMVLKSAIELDLLEIIR--GQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQGFQGLTSLVDVGGGTGATL 191          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.577e-47
Identity = 94/191 (49.21%), Postives = 129/191 (67.54%), Query Frame = 2
Query:   74 YASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDASGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            +A QL   +VLPM +++  EL + EI+   G    +  ++IA+ L T N DAP M+DRILRLL+ YSVV CS+ +   +R+Y L  V KY   N+DGV +  L  MNQDKVL+ESW  LKDA+L+GGIPFN+A+G+  FEY G DPRFNK FN  M +++++ M  + ++Y+GF  +  LVDVGG  G TL
Sbjct:    3 FAMQLASASVLPMVLKSAIELDLLEIIR--GQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQAYQGFQGLTSLVDVGGGTGATL 191          
The following BLAST results are available for this feature:
BLAST of FC876372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
OMT1_ARATH6.332e-5453.00Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_PRUDU6.332e-5454.27Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_EUCGU5.360e-5352.26Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT1_MEDSA2.660e-5250.75Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_ROSCH7.740e-5250.75Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_EUCGL1.724e-5152.06Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_CLABR6.552e-5152.48Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_ZINEL9.462e-5049.50Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
OMT2_CHRAE2.577e-4749.21Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE2.577e-4749.21Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]

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Properties
Property NameValue
Genbank descriptionC32004A05EF DevOvary1 Citrus clementina cDNA clone C32004A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876372 ID=FC876372; Name=FC876372; organism=Citrus clementina; type=EST; length=710bp
GAAAGCGTACAAGAAATTCAAGATCTTTAAAATGGATTCTATAGTTGATG
GAGAAAGAGACCAAAGCTTTGCATATGCTAGTCAATTGGTGATGGGTACA
GTGCTACCCATGGCCATTCAAGCGGTGTATGAGCTGGGCATTTTCGAGAT
CCTAGACAAAGTTGGTCCTGGTGCAAAGCTCTGTGCTTCAGATATTGCAG
CCCAATTGCTTACCAAGAACAAAGACGCACCCATGATGCTGGATCGGATT
CTCAGGCTTCTGGCTAGCTACAGTGTTGTTGAATGCTCACTTGATGCTTC
TGGTGCTCGGAGACTATATAGTTTGAATTCTGTCTCCAAATACTATGTGC
CTAACAAAGATGGCGTCTTACTAGGCCCCCTATTACAAATGAATCAGGAC
AAGGTCCTTCTGGAAAGCTGGTCCCAACTCAAAGATGCTATTCTTGAAGG
AGGAATTCCATTTAATCGAGCCCATGGAGTGCATGTATTTGAGTACGCAG
GATTGGACCCTAGGTTCAATAAACATTTTAACACAGCAATGTATAACTAT
ACCTCCCTGGTTATGAGCAACATTCTTGAATCTTACAAGGGCTTCGACAA
CATCAAGCAACTGGTCGATGTTGGTGGCAGTCTCGGTGTTACTCTTCAGC
CATCACTACCAGTACCCCTATATTAGGGCATCATTTCGACAGCCTCATGT
TATGACATGC
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