FC876372

Overview
NameFC876372
Unique NameFC876372
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14609 contig Ccv1_Contig14609:337..1046. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.849e-46
Identity = 94/201 (46.77%), Postives = 130/201 (64.68%), Query Frame = 2
Query:   59 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAK-LCASDIAAQL--LTKNKDAPMMLDRILRLLASYSVVECSLDASGAR--RLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            +++  YA QL   ++LPM ++   ELG+ E+L    P  K L   ++ A+L     N DA  M+DR+LRLLASY VV+C ++    +  R YS   V K+  PN+DGV +  L  MNQDKVL+ESW  LKDA+L+GGIPFN+A+G+  FEY G DPRFN+ FN  M N++ ++   +LE Y GF+ +  LVDVGG +G TL
Sbjct:   14 EEACMYAMQLASASILPMTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPDAADMVDRMLRLLASYDVVKCQMEDKDGKYERRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATL 214          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.414e-45
Identity = 99/197 (50.25%), Postives = 129/197 (65.48%), Query Frame = 2
Query:   59 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDK-VGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSL---DASGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLG 637
            +++  +A QL    VLPMA++A  EL + EI+ K V P   +  ++IAAQL T N +AP+MLDR+LRLLASYSVV  +L    +    RLY L  V K+   N+DGV L P L    DKVLLE W  LKDAILEGGIPFN+A+G++ F+Y G D RFNK FN  M + +++ M  ILE Y GF+ +  +VDVGG  G
Sbjct:   19 EEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLTATDKVLLEPWFYLKDAILEGGIPFNKAYGMNEFDYHGTDHRFNKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTG 215          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.548e-44
Identity = 92/203 (45.32%), Postives = 128/203 (63.05%), Query Frame = 2
Query:   59 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAK--LCASDIAAQLLTKNKD---APMMLDRILRLLASYSVVECSLDASGAR--RLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            +++  YA QL   ++LPM ++   ELG+ E+L K   G K  L   ++ A++     D   A  M+DR+LRLLASY VV C ++    R  R YS   V K+  PN+DGV +  L  MNQDKVL+ESW  LKDA+L+GGIPFN+A+G+  FEY G D RFN+ FN  M N++ ++   +L+ Y GF+ +  LVDVGG +G TL
Sbjct:   14 EEACMYAMQLASSSILPMTLKNAIELGLLEVLQKEAGGGKAALAPEEVVARMPAAPSDPAAAAAMVDRMLRLLASYDVVRCQMEDRDGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATL 216          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.323e-43
Identity = 90/201 (44.78%), Postives = 130/201 (64.68%), Query Frame = 2
Query:   53 ERDQSFA-YASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDAS--GARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            ++D+  A  A  L      PM +++ +EL I +I  K G G  +  S+IA+Q+  KN +AP++LDR+LRLLAS+SV+ C L     G++R+Y    +  Y   N     LGPLL ++ DKV++ESW  L D ILEGG+PF RAHG+  F+Y G D RFN  FN  M ++T LVM  +L++Y GF+++K LVDVGG++GV +
Sbjct:   16 DKDEQLAGLAVTLANAAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPNAPVLLDRMLRLLASHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVDVGGNIGVNV 216          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.618e-41
Identity = 90/206 (43.69%), Postives = 129/206 (62.62%), Query Frame = 2
Query:   59 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKV------GPGAKLCASDIAAQLLTK-NKDAPMMLDRILRLLASYSVVECSLDASGARRL---YSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            +++  YA QL   ++LPM ++   ELG+ E L         G  A L  +++A +L +K N  A  M+DR+LRLLASY+VV C ++     +L   Y+   V K+  PN+DGV +  L  MNQDKVL+ESW  LKDA+L+GGIPFN+A+G+  FEY G D RFN+ FN  M N++ ++   +L+ Y GFD    +VDVGG +G T+
Sbjct:   14 EEACMYALQLASSSILPMTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVDVGGGVGATV 219          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.051e-40
Identity = 90/210 (42.86%), Postives = 132/210 (62.86%), Query Frame = 2
Query:   26 FKMDSIVDGERDQSFAYASQLVMGTV--LPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDASGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGG-IPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTL 646
            F + + VD    +   Y S L +  +  LPMA++A  EL +FEI+ + GP A+L  SDI A++ TKN  A + LDRILR+L + S++  S   SG  R+Y LN  S+  V ++D V + P+L    DK ++ES+  +KD +LE G IPF+R HG+  F+YAG + R NK FN AM   +++    + + YKGFDN+K+LVDVGG +G +L
Sbjct:   23 FALRTSVDMAAQEGVNYLSGLGLSRLICLPMALRAAIELNVFEIISQAGPDAQLSPSDIVAKIPTKNPSAAISLDRILRMLGASSILSVSTTKSG--RVYGLNEESRCLVASEDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDVGGGIGTSL 230          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.329e-27
Identity = 78/208 (37.50%), Postives = 116/208 (55.77%), Query Frame = 2
Query:   53 ERDQSFAYASQLVMGT--VLPMAIQAVYELGIFEILDKVGP-GAKLCASDIAAQL--LTKNKDAPMMLDRILRLLASYSVVECS---LDASGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIP-FNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQ 649
            E+ +  A  S +V+ T  V P  + A  +L +FEI+ K  P GA +  S+IA++L   T++ D P  LDR+LRLLASYSV+  +   ++  GA R+Y L+ V KY VP++    L           LL+ W   K+A+++  I  F   HGV  +E+ G D + N+ FN +M +  +  M  +LE Y GF+ I  LVDVGG  G  L+
Sbjct:   18 EQTEDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLE 225          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.591e-12
Identity = 50/194 (25.77%), Postives = 94/194 (48.45%), Query Frame = 2
Query:   71 AYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDASGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKG-FDNIKQLVDVGGSLGVTLQ 649
            A+  +++ G    + ++   ELGI +I+D       +  +D+A++L   + +   +  RILR L    ++       G ++ Y+L  ++     N    ++  +L M Q K  +  W  +KD + + G  F +A G+ ++EY    P  ++ FN  M   T L+ S+++   +  F  I  LVDVGG  G T++
Sbjct:   16 AHVWKIIYGFADSLVLRCAVELGIVDIIDN--NNQPMALADLASKLPVSDVNCDNLY-RILRYLVKMEILRVEKSDDGQKK-YALEPIATLLSRNAKRSMVPMILGMTQ-KDFMTPWHSMKDGLSDNGTAFEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSLVDVGGGNGTTVK 204          
BLAST of FC876372 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 57/192 (29.69%), Postives = 97/192 (50.52%), Query Frame = 2
Query:   89 VMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTK--NKDAPMMLDRILRLLASYSV-VECSLDASGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAIL-EGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKG-FDNIKQLVDVGGSLGVTLQ 649
            + G    + ++   +L +  I+   G    L  S+++++L ++  N+DA   L R++R L    +  + S+D  G  R Y L   +KY V   D  ++G +L +  DK  +  W  LKD +  E G  F +A G +++ Y    P  N+ FN AM N + L+MS +++     F+ I  LVDVGG  G  ++
Sbjct:   18 IYGFAESLVLKCAVQLDLANIIHNSGTSMTL--SELSSRLPSQPVNEDA---LYRVMRYLVHMKLFTKASID--GELR-YGLAPPAKYLVKGWDKCMVGSILAIT-DKDFMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVKECGNIFNGITTLVDVGGGTGTAVR 200          
The following BLAST results are available for this feature:
BLAST of FC876372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT1_SACOF2.849e-4646.77Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
IEMT_CLABR1.414e-4550.25(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT1_MAIZE4.548e-4445.32Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
IMT1_MESCR1.323e-4344.78Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
OMT1_ORYSJ1.618e-4143.69Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
SMT_COPJA3.051e-4042.86(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA1.329e-2737.50Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
4OMT_COPJA4.591e-1225.773'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
6OMT_COPJA8.658e-1129.69(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]

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Properties
Property NameValue
Genbank descriptionC32004A05EF DevOvary1 Citrus clementina cDNA clone C32004A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876372 ID=FC876372; Name=FC876372; organism=Citrus clementina; type=EST; length=710bp
GAAAGCGTACAAGAAATTCAAGATCTTTAAAATGGATTCTATAGTTGATG
GAGAAAGAGACCAAAGCTTTGCATATGCTAGTCAATTGGTGATGGGTACA
GTGCTACCCATGGCCATTCAAGCGGTGTATGAGCTGGGCATTTTCGAGAT
CCTAGACAAAGTTGGTCCTGGTGCAAAGCTCTGTGCTTCAGATATTGCAG
CCCAATTGCTTACCAAGAACAAAGACGCACCCATGATGCTGGATCGGATT
CTCAGGCTTCTGGCTAGCTACAGTGTTGTTGAATGCTCACTTGATGCTTC
TGGTGCTCGGAGACTATATAGTTTGAATTCTGTCTCCAAATACTATGTGC
CTAACAAAGATGGCGTCTTACTAGGCCCCCTATTACAAATGAATCAGGAC
AAGGTCCTTCTGGAAAGCTGGTCCCAACTCAAAGATGCTATTCTTGAAGG
AGGAATTCCATTTAATCGAGCCCATGGAGTGCATGTATTTGAGTACGCAG
GATTGGACCCTAGGTTCAATAAACATTTTAACACAGCAATGTATAACTAT
ACCTCCCTGGTTATGAGCAACATTCTTGAATCTTACAAGGGCTTCGACAA
CATCAAGCAACTGGTCGATGTTGGTGGCAGTCTCGGTGTTACTCTTCAGC
CATCACTACCAGTACCCCTATATTAGGGCATCATTTCGACAGCCTCATGT
TATGACATGC
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