FC876373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876373 vs. ExPASy Swiss-Prot
Match: CLIC4_RAT (Chloride intracellular channel protein 4 OS=Rattus norvegicus GN=Clic4 PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 8.472e-15 Identity = 55/216 (25.46%), Postives = 99/216 (45.83%), Query Frame = 3 Query: 66 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVTVRIIEEKYPEPSL----TNPPEFASVGSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDEHL----------------KTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 647 +E+ VKA I G+CPFSQR + L K V + +++ KP ++P P + F+ + D + +EE P PE + G IF F ++K+ P N+ E+ LL+ L+ LDE+L K+ F+ G+++T D +L PKL+ ++V + ++ + +P+ + + Y ++ + F T Sbjct: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVTTVDLKRKPAHLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPGEIDENSMEDIKSSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNT 233
BLAST of FC876373 vs. ExPASy Swiss-Prot
Match: CLIC4_PONAB (Chloride intracellular channel protein 4 OS=Pongo abelii GN=CLIC4 PE=2 SV=3) HSP 1 Score: 79.337 bits (194), Expect = 1.887e-14 Identity = 55/216 (25.46%), Postives = 98/216 (45.37%), Query Frame = 3 Query: 66 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVTVRIIEEKYPEPSL----TNPPEFASVGSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDEHL----------------KTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 647 +E+ VKA I G+CPFSQR + L K V + +++ KP ++P P + F+ + D + +EE P PE + G IF F ++K+ P N+ E+ LL+ L+ LDE+L K F+ G+++T D +L PKL+ ++V + ++ + +P+ + + Y ++ + F T Sbjct: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVSTVDLKRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNT 233
BLAST of FC876373 vs. ExPASy Swiss-Prot
Match: CLIC4_MOUSE (Chloride intracellular channel protein 4 OS=Mus musculus GN=Clic4 PE=1 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 3.219e-14 Identity = 55/216 (25.46%), Postives = 98/216 (45.37%), Query Frame = 3 Query: 66 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVTVRIIEEKYPEPSL----TNPPEFASVGSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDEHL----------------KTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 647 +E+ VKA I G+CPFSQR + L K V + +++ KP ++P P + F+ + D + +EE P PE + G IF F ++K+ P N+ E+ LL+ L+ LDE+L K F+ G+++T D +L PKL+ ++V + ++ + +P+ + + Y ++ + F T Sbjct: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRRFLDGDEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNT 233
BLAST of FC876373 vs. ExPASy Swiss-Prot
Match: CLIC4_BOVIN (Chloride intracellular channel protein 4 OS=Bos taurus GN=CLIC4 PE=2 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 3.219e-14 Identity = 55/216 (25.46%), Postives = 98/216 (45.37%), Query Frame = 3 Query: 66 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVTVRIIEEKYPEPSL----TNPPEFASVGSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDEHL----------------KTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 647 +E+ VKA I G+CPFSQR + L K V + +++ KP ++P P + F+++ D + +EE P PE + G IF F ++K+ P N+ E+ LL+ L+ LDE+L K F+ G ++T D +L PKL+ ++V + ++ + +P+ + + Y ++ + F T Sbjct: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFNNEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFDIPKGMTGIWRYLTNAYSRDEFTNT 233
BLAST of FC876373 vs. ExPASy Swiss-Prot
Match: CLIC4_HUMAN (Chloride intracellular channel protein 4 OS=Homo sapiens GN=CLIC4 PE=1 SV=4) HSP 1 Score: 78.1814 bits (191), Expect = 4.204e-14 Identity = 55/216 (25.46%), Postives = 97/216 (44.91%), Query Frame = 3 Query: 66 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVTVRIIEEKYPEPSL----TNPPEFASVGSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDEHL----------------KTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 647 +E+ VKA I G+CPFSQR + L K V + +++ KP ++P P + F+ + D + +EE P PE + G IF F ++K+ P N+ E+ LL+ L+ LDE+L K F+ G ++T D +L PKL+ ++V + ++ + +P+ + + Y ++ + F T Sbjct: 19 IELFVKAGSDGESI-GNCPFSQRLFMILWLKGVVFSVTTVDLKRKPADLQNLAPGTHPPFITFNSEVKTDVNKIEEFLEEVLCPPKYLKLSPKHPESNTAGMDIFAKFSAYIKNSRPEANEALERGLLKTLQKLDEYLNSPLPDEIDENSMEDIKFSTRKFLDGNEMTLADCNLLPKLHIVKVVAKKYRNFDIPKEMTGIWRYLTNAYSRDEFTNT 233
BLAST of FC876373 vs. ExPASy Swiss-Prot
Match: CLIC2_HUMAN (Chloride intracellular channel protein 2 OS=Homo sapiens GN=CLIC2 PE=1 SV=3) HSP 1 Score: 78.1814 bits (191), Expect = 4.204e-14 Identity = 58/217 (26.73%), Postives = 101/217 (46.54%), Query Frame = 3 Query: 66 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVTVRIIEE-----KYPEPSLTNPPEFASVGSKIFPSFVNFLKS--KDPNDGTEQALLEELKALDEHLKT----------------HGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 647 +E+ VKA I G+CPF QR + L K V + ++++ KP+ +++P P + ++ + D +E+ +YP S F VG +F F ++K+ K+ N E++LL+E K LD++L T F+ G+++T D SL PKL ++VA + ++ + +P + V Y +A E F T Sbjct: 14 IELFVKAGSDGESI-GNCPFCQRLFMILWLKGVKFNVTTVDMTRKPEELKDLAPGTNPPFLVYNKELKTDFIKIEEFLEQTLAPPRYPHLSPKYKESF-DVGCNLFAKFSAYIKNTQKEANKNFEKSLLKEFKRLDDYLNTPLLDEIDPDSAEEPPVSRRLFLDGDQLTLADCSLLPKLNIIKVAAKKYRDFDIPAEFSGVWRYLHNAYAREEFTHT 228
BLAST of FC876373 vs. ExPASy Swiss-Prot
Match: CLIC5_RAT (Chloride intracellular channel protein 5 OS=Rattus norvegicus GN=Clic5 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.172e-14 Identity = 58/223 (26.01%), Postives = 104/223 (46.64%), Query Frame = 3 Query: 54 RKMAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVTVRIIE-----EKYPEPSLTNPPEFASVGSKIFPSFVNFLKS--KDPNDGTEQALLEELKALDEHL----------KTHGG------PFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKA 653 R +E+ VKA + I G+CPFSQR + L K V + +++ KP ++P P + F+ D + +E EKYP+ + + E + G IF F ++K+ + N E+ L + L+ LD++L THG F+ G+++T D +L PKL+ +++ + ++ + +P + + Y K +A + F T A Sbjct: 12 RDPEIELFVKAGIDGESI-GNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAARH-RESNTAGIDIFSKFSAYIKNTKQQNNAALERGLTKALRKLDDYLNTPLPEEIDTNTHGDEKGSQRKFLDGDELTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCA 232
BLAST of FC876373 vs. ExPASy Swiss-Prot
Match: CLIC5_MOUSE (Chloride intracellular channel protein 5 OS=Mus musculus GN=Clic5 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.172e-14 Identity = 58/223 (26.01%), Postives = 104/223 (46.64%), Query Frame = 3 Query: 54 RKMAVEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVTVRIIE-----EKYPEPSLTNPPEFASVGSKIFPSFVNFLKS--KDPNDGTEQALLEELKALDEHL----------KTHGG------PFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKA 653 R +E+ VKA + I G+CPFSQR + L K V + +++ KP ++P P + F+ D + +E EKYP+ + + E + G IF F ++K+ + N E+ L + L+ LD++L THG F+ G+++T D +L PKL+ +++ + ++ + +P + + Y K +A + F T A Sbjct: 12 RDPEIELFVKAGIDGESI-GNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKH-RESNTAGIDIFSKFSAYIKNTKQQNNAALERGLTKALRKLDDYLNSPLPEEIDTNTHGDEKGSQRKFLDGDELTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCA 232
BLAST of FC876373 vs. ExPASy Swiss-Prot
Match: CLIC2_RAT (Chloride intracellular channel protein 2 OS=Rattus norvegicus GN=Clic2 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.223e-13 Identity = 59/217 (27.19%), Postives = 99/217 (45.62%), Query Frame = 3 Query: 66 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVTVRIIEE-----KYPEPSLTNPPEFASVGSKIFPSFVNFLKS--KDPNDGTEQALLEELKALDEHLKT----------------HGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 647 +E+ VKA I G+CPF QR + L K V + I+ + KP+ +++P P + ++ + D +E+ +YP S F VG +F F ++K+ K+ N E++LL E K LD++L T F+ G+++T D SL PKL ++VA + ++ + +P + V Y +A E F T Sbjct: 14 IELFVKAGSDGESI-GNCPFCQRLFMILWLKGVKFNVTTIDTARKPEELKDLAPGTNPPFLIYNKELKTDFIKIEEFLEKTLAPPRYPHLSPKYKESF-DVGCNLFAKFSAYIKNTQKEANKNFEKSLLREFKRLDDYLNTPLLDEIDPDSTEERTLSRRLFLDGDQLTLADCSLLPKLNIIKVAAKKYRDFDIPAEFSGVWRYLHNAYAREEFAHT 228
BLAST of FC876373 vs. ExPASy Swiss-Prot
Match: GSTO1_MOUSE (Glutathione S-transferase omega-1 OS=Mus musculus GN=Gsto1 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.766e-12 Identity = 54/171 (31.58%), Postives = 84/171 (49.12%), Query Frame = 3 Query: 117 CPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVK-FDDKWVADSDVTVRIIEEKYPEPSLTNPPEFASVG--------SKIFPSFVNFLKSKDPND--GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAH 596 CPF+QR L+ L+ K + ++ IN+ +KP+WF E +P G VPV++ V +S +T ++E YPE L + SK+ P +F++SK D +AL E K L+E + + F+ G+ + VD P L+ ALE + E LAH Sbjct: 32 CPFAQRTLMVLKAKGIRHEVININLKNKPEWFFEKNPLGLVPVLENSQGHLVTESVITCEYLDEAYPEKKLFPDDPYKKARQKMTLESFSKVPPLIASFVRSKRKEDSPNLREALENEFKKLEEGMDNYKS-FLGGDSPSMVDYLTWPWFQRLE-ALE------LKECLAH 194 The following BLAST results are available for this feature:
BLAST of FC876373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876373 ID=FC876373; Name=FC876373; organism=Citrus clementina; type=EST; length=653bpback to top |