FC876373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876373 vs. ExPASy Swiss-Prot
Match: CLIC5_HUMAN (Chloride intracellular channel protein 5 OS=Homo sapiens GN=CLIC5 PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 1.766e-12 Identity = 55/219 (25.11%), Postives = 100/219 (45.66%), Query Frame = 3 Query: 66 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVTVRIIE-----EKYPEPSLTNPPEFASVGSKIFPSFVNFLKS--KDPNDGTEQALLEELKALDEHLKT----------------HGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKA 653 + + VKA + I G+CPFSQR + L K V + +++ KP ++P P + F+ D + +E EKYP+ + + E + G IF F ++K+ + N E+ L + LK LD++L T F+ G+++T D +L PKL+ +++ + ++ + +P + + Y K +A + F T A Sbjct: 175 IYLFVKAGIDGESI-GNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPKLAAKH-RESNTAGIDIFSKFSAYIKNTKQQNNAALERGLTKALKKLDDYLNTPLPEEIDANTCGEDKGSRRKFLDGDELTLADCNLLPKLHVVKIVAKKYRNYDIPAEMTGLWRYLKNAYARDEFTNTCA 391
BLAST of FC876373 vs. ExPASy Swiss-Prot
Match: CLIC5_BOVIN (Chloride intracellular channel protein 5 OS=Bos taurus GN=CLIC5 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.140e-12 Identity = 55/220 (25.00%), Postives = 98/220 (44.55%), Query Frame = 3 Query: 66 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVTVRIIE-----EKYPEPSLTNPPEFASVGSKIFPSFVNFLKS--KDPNDGTEQALLEELKALDEHLKT-----------------HGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKTKA 653 + + VKA + I G+CPFSQR + L K V + +++ KP ++P P + F+ D + +E EKYP + + E + G IF F ++K+ + N E+ L + LK LD++L T F+ G+++T D +L PKL+ +++ + ++ + P + + Y K +A + F T A Sbjct: 201 INLFVKAGIDGESI-GNCPFSQRLFMILWLKGVVFNVTTVDLKRKPADLHNLAPGTHPPFLTFNGDVKTDVNKIEEFLEETLTPEKYPRLAAKH-RESNTAGIDIFVKFSAYIKNTKQQSNAALERGLTKALKKLDDYLNTPLPEEIDADTRGDDEKGSRRKFLDGDELTLADCNLLPKLHVVKIVAKKYRNYDFPAEMTGLWRYLKNAYARDEFTNTCA 418
BLAST of FC876373 vs. ExPASy Swiss-Prot
Match: GSTO1_RAT (Glutathione S-transferase omega-1 OS=Rattus norvegicus GN=Gsto1 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 6.712e-12 Identity = 48/158 (30.38%), Postives = 82/158 (51.90%), Query Frame = 3 Query: 117 CPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVK-FDDKWVADSDVTVRIIEEKYPEPSL--TNPPEFA------SVGSKIFPSFVNFLKSKDPND--GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALE 557 CPF+QR L+ L+ K + ++ IN+ +KP+WF E +P G VPV++ + +S +T ++E YPE L +P E A + SK+ +F+++K D G ++ L +E L+E + F G ++ +D + P L+ ALE Sbjct: 32 CPFAQRTLMVLKAKGIRHEIININLKNKPEWFFEKNPFGLVPVLENTQGHLITESVITCEYLDEAYPEKKLFPDDPYEKACQKMTFELFSKVPSLVTSFIRAKRKEDHPGIKEELKKEFSKLEEAMANKRTAFFGGNSLSMIDYLIWPWFQRLE-ALE 188
BLAST of FC876373 vs. ExPASy Swiss-Prot
Match: GSTO1_PIG (Glutathione S-transferase omega-1 OS=Sus scrofa GN=GSTO1 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 6.712e-12 Identity = 47/158 (29.75%), Postives = 82/158 (51.90%), Query Frame = 3 Query: 117 CPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVK-FDDKWVADSDVTVRIIEEKYPEPSL--TNPPEFA------SVGSKIFPSFVNFLKSKDPND--GTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALE 557 CPF+QR LL L K + ++ IN+ +KP+WF + +P G VPV++ + + +S +T ++E YP L +P E A + SK+ P + F++ ++ D G ++ L +E L+E L + G ++ +D + P L+ ALE Sbjct: 32 CPFAQRTLLVLNAKGIRHQVININLKNKPEWFFQKNPSGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMVFELSSKVPPLLIRFIRRENEADCSGLKEELRKEFSKLEEVLTKKKTTYFGGSSLSMIDYLIWPWFERLE-ALE 188
BLAST of FC876373 vs. ExPASy Swiss-Prot
Match: CLIC3_HUMAN (Chloride intracellular channel protein 3 OS=Homo sapiens GN=CLIC3 PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 6.712e-12 Identity = 59/220 (26.82%), Postives = 99/220 (45.00%), Query Frame = 3 Query: 66 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVTVRIIEEKYPEPSLTNPPEFASV----------GSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDEHLKTH------GGP--------FIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 647 +++ VKA+ + G CP QR + L K VP+ ++ P + +P ++P++ +D D T++I E + E +L PP+F S+ G+ +F F F+K+ P ++ Q LL L LD +L+ G P F+ G+++T D SL PKL+ + HF+Q +P L V Y + F+ T Sbjct: 6 LQLFVKASEDGESV-GHCPSCQRLFMVLLLKGVPFTLTTVDTRRSPDVLKDFAPGSQLPILLYDSDAKTD---TLQI--EDFLEETL-GPPDFPSLAPRYRESNTAGNDVFHKFSAFIKNPVPAQDEALYQQLLRALARLDSYLRAPLEHELAGEPQLRESRRRFLDGDRLTLADCSLLPKLHIVDTVCAHFRQAPIPAELRGVRRYLDSAMQEKEFKYT 218
BLAST of FC876373 vs. ExPASy Swiss-Prot
Match: CLIC3_MOUSE (Chloride intracellular channel protein 3 OS=Mus musculus GN=Clic3 PE=2 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 9.693e-11 Identity = 58/220 (26.36%), Postives = 97/220 (44.09%), Query Frame = 3 Query: 66 VEICVKAAVGAPDILGDCPFSQRALLTLEEKKVPYKRHLINISDKPQWFLEISPEGKVPVVKFDDKWVADSDVTVRIIEEKYPEPSLTNPPEFASV----------GSKIFPSFVNFLKSKDP--NDGTEQALLEELKALDE--------------HLKTHGGPFIAGEKVTAVDLSLAPKLYHLQVALEHFKQWTVPESLAHVHGYTKKLFALESFQKT 647 +++ VKA+ + G CP QR + L K VP+ ++ + +P ++P++ +D D T++I E++ E +L PP+F S+ G+ IF F F+K+ P ++ Q LL L LD HL+ F+ G++ T D SL PKL+ + HF+Q +P L+ V Y + F+ T Sbjct: 7 LQLFVKASEDGESV-GHCPSCQRLFMVLLLKGVPFTLTTVDTRRALDVLKDFAPGSQLPILLYDGDVKTD---TLQI--EEFLEETL-GPPDFPSLAPRYRESNTAGNDIFHKFSAFIKNPVPTQDNALYQQLLRALTRLDSYLRAPLDHELAQEPHLRESHRRFLDGDQFTLADCSLLPKLHIVDTVCAHFRQLPIPAELSCVRRYLDSALQKKEFKYT 219 The following BLAST results are available for this feature:
BLAST of FC876373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876373 ID=FC876373; Name=FC876373; organism=Citrus clementina; type=EST; length=653bpback to top |