FC876374

Overview
NameFC876374
Unique NameFC876374
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length643
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876374 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.606e-26
Identity = 59/157 (37.58%), Postives = 91/157 (57.96%), Query Frame = 3
Query:  156 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLG 620
            PPGP   PI+GNL +L  +PH+ +  L + HGP+M L+LG+             + LK HD +  +RP    +K I+YN++DI F PYG  WR LRK++ + LFS K  + +R++R+EE  +L + L+ A  +  PVNL + L     + + R+  G
Sbjct:   32 PPGPPKLPIIGNLHYLNGLPHKCLLNLWKIHGPVMQLQLGYVPLVVISSNQAAEEVLKTHDLDCCSRPETIASKTISYNFKDIGFAPYGEEWRALRKLAVIELFSLKKFNSFRYIREEENDLLVKKLSEASEKQSPVNLKKALFTLSASIVCRLAFG 188          
BLAST of FC876374 vs. ExPASy Swiss-Prot
Match: C71B1_THLAR (Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.311e-24
Identity = 58/162 (35.80%), Postives = 90/162 (55.56%), Query Frame = 3
Query:  156 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTR--ALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFG 635
            PPGP   PI+GNL  LG  PH+++  L++T+GPLM L+LG                LK +D    +RP  +    I YN +D+VF PY   WR +RK++ V L++ K +  +RH+R+EE+A   R    A++  E VNL+Q++     + + R+  G  + G
Sbjct:   30 PPGPPRLPIIGNLHQLGEKPHRAMVELSKTYGPLMSLKLGSVTTVVATSVETVRDVLKTYDLECCSRPYMTYPARITYNLKDLVFSPYDKYWRQVRKLTVVELYTAKRVQSFRHIREEEVASFVRFNKQAASSEETVNLSQKILKMSGSVICRIGFGINLEG 191          
BLAST of FC876374 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.630e-24
Identity = 59/163 (36.20%), Postives = 89/163 (54.60%), Query Frame = 3
Query:  156 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLGFRVFGD 638
            PP P   PI+GNL  LG +PH+S+  LA   GPL+ L LG              + LK HD  F++RP  + A+ I Y+  D+ F PYG  WR +RKI  + L S K ++ YR +R+EE+ ++   ++ + +  E VNL++ L L     + RV  G +  G+
Sbjct:   32 PPSPPNLPIIGNLHQLGNLPHRSLRSLANELGPLILLHLGHIPTLIVSTAEIAEEILKTHDLIFASRPSTTAARRIFYDCTDVAFSPYGEYWRQVRKICVLELLSIKRVNSYRSIREEEVGLMMERISQSCSTGEAVNLSELLLLLSSGTITRVAFGKKYEGE 194          
BLAST of FC876374 vs. ExPASy Swiss-Prot
Match: C71BY_ARATH (Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=CYP71B37 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.254e-23
Identity = 56/157 (35.67%), Postives = 88/157 (56.05%), Query Frame = 3
Query:  156 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLG 620
            PP P  +PI+GNL  LG +PHQS+  L++ +GP+M L+ G              Q LKIHD N  +RP  +G + ++YNY DIVF P+   W+ LR++    LFS K +   + +R+EE+  L  + + +  +  PVNL+++L    V  + +   G
Sbjct:   32 PPSPPGFPIIGNLHQLGELPHQSLWSLSKKYGPVMLLKFGSIPTVVVSSSETAKQALKIHDLNCCSRPSLAGPRALSYNYLDIVFSPFNDYWKELRRMCVQELFSPKQVHLIQPIREEEVKKLMNSFSESAAQKTPVNLSEKLASLTVGVICKAAFG 188          
BLAST of FC876374 vs. ExPASy Swiss-Prot
Match: C71AP_ARATH (Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=CYP71A25 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.254e-23
Identity = 53/161 (32.92%), Postives = 87/161 (54.04%), Query Frame = 3
Query:  156 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGD 638
            PP P   P++GNL  LG   H+S+  L+R +GPLM L LG              + LK HD  F+NRP +  ++ + YN +D+   PYG  WR ++ +  +HL S K +  +R VR+EE+ ++   +  + + P N+++ L     + + RV LG +  G+
Sbjct:   31 PPSPPGLPLIGNLHQLGRHTHRSLCDLSRRYGPLMLLHLGRVPVLIVSSADMAQEILKTHDQAFANRPRSKLSQKLLYNNRDVASAPYGEYWRQMKSVCVIHLLSNKMVRSFRDVREEEITLMMAKIRKSSSLPFNVSKVLECLTNDVICRVALGRKYGGE 191          
BLAST of FC876374 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 2.794e-23
Identity = 54/142 (38.03%), Postives = 85/142 (59.86%), Query Frame = 3
Query:  156 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQR 575
            PP P  +PI+GNL  LG +PHQS+  L++T+GP+M L+LG              Q LKI+D +  +RP  +GAK ++YNY DI F P+   W+ LR+I    LFS K +   + +++EE+  L  +   + ++  PVNL+++
Sbjct:   32 PPSPPGFPIIGNLHQLGELPHQSLWSLSKTYGPVMLLKLGSVPTVVVSSSETAKQVLKINDLHCCSRPSLAGAKELSYNYLDIAFSPFDDYWKELRRICVQELFSAKRVHSIQPIKEEEVRKLIVSATESASQKSPVNLSEK 173          
BLAST of FC876374 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.225e-23
Identity = 56/163 (34.36%), Postives = 87/163 (53.37%), Query Frame = 3
Query:  156 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGD 638
            PP P   P++GNL  L   PH++++ L+  HGPLM LR G                +K HD  F+NRP    A  I+   +D+VF PYG  WR ++ + ++HL S K +      R+EE+ +L   L  AS  +  VNL++ +   V + +G+V+LG +  G+
Sbjct:   33 PPSPWRLPVIGNLHQLSLHPHRALSSLSARHGPLMLLRFGRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETLEEASLSSSSVNLSKLITNMVSDIMGKVVLGKKYSGE 195          
BLAST of FC876374 vs. ExPASy Swiss-Prot
Match: C71BV_ARATH (Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=CYP71B34 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.062e-22
Identity = 55/153 (35.95%), Postives = 87/153 (56.86%), Query Frame = 3
Query:  156 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGR 608
            PP P   PI+GNL  LG +PHQS+  L++ +GP+M L+LG              Q LKIHD +  +RP  +GA+ ++YNY DI F PY   W+ +RK++   LFS K +   + ++ EE+  L  +++ +  +  P+NL + L    V+ + R
Sbjct:   32 PPSPPGCPIIGNLHQLGELPHQSLWKLSKKYGPVMLLKLGRVPTVIVSSSETAKQALKIHDLHCCSRPGFAGARELSYNYLDIAFSPYDDYWKEVRKLAVQELFSSKQVHSIQPIKDEEVKKLIDSISESAAQKTPINLNKTLLALTVSVVCR 184          
BLAST of FC876374 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.811e-22
Identity = 56/160 (35.00%), Postives = 86/160 (53.75%), Query Frame = 3
Query:  156 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEP--VNLAQRLNLCVVNALGRVMLGFRV 629
            PPGPK  PI+GNL     +  ++   L+  +GP+++LR GF             + LK HD    +RP   G + I+YN++DI F PYG  WR +RK+S V LFS K L  +R++R+EE  +  + L+   +    VNL + L   V + + R+  G  +
Sbjct:   29 PPGPKKLPIIGNLHQRRELHPRNSRNLSEKYGPIVFLRYGFVPVVVISSKEAAEEVLKTHDLECCSRPETVGTRAISYNFKDIGFAPYGEDWRTMRKLSVVELFSSKKLQSFRYIREEENDLCVKKLSDLASRRSLVNLEKTLFTLVGSIVCRIGFGINL 188          
BLAST of FC876374 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.365e-22
Identity = 60/157 (38.22%), Postives = 82/157 (52.23%), Query Frame = 3
Query:  156 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFR 626
            PPGP+  P +GNL  LG +PHQS+  L+  HGPLM+L+LG              +  K HDS FS RP    A  + Y    + F PYG  WR +RKI  + L S K +  +  VR EE+ +L + +A     PVNL++       N + R+ LG R
Sbjct:   34 PPGPRKLPFIGNLHQLGTLPHQSLQYLSNKHGPLMFLQLGSIPTLVVSSAEMAREIFKNHDSVFSGRPSLYAANRLGYG-STVSFAPYGEYWREMRKIMILELLSPKRVQSFEAVRFEEVKLLLQTIA-LSHGPVNLSELTLSLTNNIVCRIALGKR 188          
The following BLAST results are available for this feature:
BLAST of FC876374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
C71BN_ARATH4.606e-2637.58Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]
C71B1_THLAR4.311e-2435.80Cytochrome P450 71B1 OS=Thlaspi arvense GN=CYP71B1... [more]
C71A1_PERAE5.630e-2436.20Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C71BY_ARATH1.254e-2335.67Cytochrome P450 71B37 OS=Arabidopsis thaliana GN=C... [more]
C71AP_ARATH1.254e-2332.92Cytochrome P450 71A25 OS=Arabidopsis thaliana GN=C... [more]
C71B9_ARATH2.794e-2338.03Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71AG_ARATH6.225e-2334.36Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C71BV_ARATH1.062e-2235.95Cytochrome P450 71B34 OS=Arabidopsis thaliana GN=C... [more]
C71BS_ARATH1.811e-2235.00Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C71A9_SOYBN2.365e-2238.22Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32004A07EF DevOvary1 Citrus clementina cDNA clone C32004A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876374 ID=FC876374; Name=FC876374; organism=Citrus clementina; type=EST; length=643bp
GACTCGTACCATTTCTACACTTTCTCTGGGAAACGAAACAAAGAGCAATG
TCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAATTGTCAT
TTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCTCCCACC
GTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTCCCTCAC
TTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAACCCACGG
CCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGGCCGCTT
CCGCATCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAACTTCTCC
AACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTATCAGGA
CATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGAAGATCA
GCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGGCACGTT
CGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGCAGGAAC
GGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGTTGTGAATGCCC
TAGGGCGGGTGATGCTAGGCTTCAGAGTGTTCGGCGACGGTAC
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