FC876376

Overview
NameFC876376
Unique NameFC876376
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10210 contig Ccv1_Contig10210:13..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 6.659e-53
Identity = 111/187 (59.36%), Postives = 125/187 (66.84%), Query Frame = 2
Query:  116 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTLCVVYTV 676
            FP  +  G A      +KDY +PPP P F+  EL  WSFYRA IAEFIA            +G K     A N+  CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAI G G+VK FQ   Y   GGGAN +A GY+ G GL AEI+GT  +VYTV
Sbjct:   15 FPERQPIGTA--AQTESKDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKR----APNM--CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTV 193          
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.697e-53
Identity = 109/187 (58.29%), Postives = 127/187 (67.91%), Query Frame = 2
Query:  116 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTLCVVYTV 676
            FP  +  G +   + S KDY +PPP P F+  EL+ WSF+RA IAEFIA            +G K      ++ + CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAI G G+VK FQ   Y   GGGAN +A GY+ G GL AEIIGT  +VYTV
Sbjct:   15 FPERQPIGTS---AQSDKDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVK------RSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTV 192          
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.697e-53
Identity = 109/187 (58.29%), Postives = 127/187 (67.91%), Query Frame = 2
Query:  116 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTLCVVYTV 676
            FP  +  G +   + S KDY +PPP P F+  EL+ WSF+RA IAEFIA            +G K      ++ + CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAI G G+VK FQ   Y   GGGAN +A GY+ G GL AEIIGT  +VYTV
Sbjct:   15 FPERQPIGTS---AQSDKDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVK------RSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTV 192          
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.484e-52
Identity = 107/190 (56.32%), Postives = 127/190 (66.84%), Query Frame = 2
Query:  116 FPMAKDTGVAEHGSYSA---KDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTLCVVYTV 676
            F   +  G A  G+ +    KDY +PPP PLF+  EL  WSFYRA IAEF+A            +G       +K+   CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGAI G G+VK FQ+  Y   GGGAN +A GY+ G GL AEI+GT  +VYTV
Sbjct:   15 FSERQPIGTAAQGAGAGDDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGV------SKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTV 198          
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 4.316e-52
Identity = 106/180 (58.89%), Postives = 121/180 (67.22%), Query Frame = 2
Query:  137 GVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTLCVVYTV 676
            G A  G+   KDY +PP  P+F+  ELT WSFYRA IAEF+A            +G        K+   CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM  QCLGAI G G+VK FQ+  Y   GGGAN +  GY+ G GL AEI+GT  +VYTV
Sbjct:   22 GTAAQGA-EEKDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMGVN------KSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQRGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTV 194          
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.637e-52
Identity = 105/170 (61.76%), Postives = 119/170 (70.00%), Query Frame = 2
Query:  167 KDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTLCVVYTV 676
            KDY +PPP PLF+  EL+ WSFYRA IAEF+A            +G K      ++   C+ VGI G+AWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YMV QCLGAI G G+VK F    Y R GGGAN +  GY+ G GL AEIIGT  +VYTV
Sbjct:   30 KDYKEPPPAPLFEPGELSSWSFYRAGIAEFMATFLFLYITILTVMGLK------RSDSLCSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTV 193          
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 3.654e-51
Identity = 107/188 (56.91%), Postives = 123/188 (65.43%), Query Frame = 2
Query:  116 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQ-KSYYTRYGGGANELADGYSTGVGLAAEIIGTLCVVYTV 676
            FP  +  G+A       KDY +PPP PLF+  ELT WSFYRA IAEFIA            +G   ++        C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV Q LGAI G G+VK F+ K  +    GGAN +A GY+ G GL AEI+GT  +VYTV
Sbjct:   15 FPERQPLGIAAQSQDEPKDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSK------CKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTV 196          
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.233e-51
Identity = 104/194 (53.61%), Postives = 129/194 (66.49%), Query Frame = 2
Query:   95 LQIIVTGFPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTLCVVYTV 676
            +++ V  FP  +  G A       +DY++PP  PLF+A EL+ WSFYRA IAEF+A            +G       +K+   C  VGI GIAWAFGGMIF LVYCTAG+SGGHINPAVTFGL LARK+SL RAV Y+V QCLGA+ G G+VKAF  + Y   GGGAN ++ GY+ G GL AE++GT  +VYTV
Sbjct:   15 VRVGVDRFPERQPIGTAADDL--GRDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGV------SKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAFGSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTV 200          
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.276e-50
Identity = 101/171 (59.06%), Postives = 117/171 (68.42%), Query Frame = 2
Query:  167 KDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQ-KSYYTRYGGGANELADGYSTGVGLAAEIIGTLCVVYTV 676
            KDY DPPP PL D  EL KWS YRA IAEF A            IG K Q+       G  G G+LGIAWAFGG+IFVLVYCTAGISGGH+NPAVTF + LAR+VSL RA +Y +AQC+GA+ G GL +A      Y R+GGGANELA GYS G G+ AE++GT  +VYTV
Sbjct:   12 KDYQDPPPAPLVDTGELGKWSLYRAAIAEFTATLLLVCISVSTVIGEKRQS-------GEGGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTV 175          
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.437e-47
Identity = 102/180 (56.67%), Postives = 119/180 (66.11%), Query Frame = 2
Query:  137 GVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTLCVVYTV 676
            G A  G+   KDY +PPP PLF+  EL  WSFYR  IAEF+A            +G       +K+   CA VGI GIAW+FGGMI  LVYCTAGISG HINPAVTFGLFLARK+SL RAV Y++ QCLGAI G G+VK FQ+  Y   GG  N +A GY+ G GL AEI+GT  +VYTV
Sbjct:   22 GTAAQGT-DDKDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGV------SKSTSKCATVGIQGIAWSFGGMILALVYCTAGISG-HINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTV 193          
The following BLAST results are available for this feature:
BLAST of FC876376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
PIP15_ARATH6.659e-5359.36Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP11_VICFA8.697e-5358.29Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH8.697e-5358.29Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP13_MAIZE1.484e-5256.32Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP13_ORYSJ4.316e-5258.89Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP1_SOLLC5.637e-5261.76Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP2_PEA3.654e-5156.91Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP16_MAIZE6.233e-5153.61Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP28_ORYSJ5.276e-5059.06Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]
PIP11_MAIZE1.437e-4756.67Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32004A09EF DevOvary1 Citrus clementina cDNA clone C32004A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876376 ID=FC876376; Name=FC876376; organism=Citrus clementina; type=EST; length=692bp
GATCCAAAACAACCAAAAAAAAAAAAGAAAAAGAAAAAGGCTTCTCTCTC
GTTGTGCTTGTGGCTTTGCAGTGCTCTCAGTTTTCTCTGTTTCTCTCCAA
ATCATTGTTACTGGTTTTCCAATGGCGAAGGACACTGGGGTGGCAGAGCA
CGGCTCATATTCAGCCAAGGACTACACGGACCCACCGCCGGAGCCGCTAT
TCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAGCCTTGATAGCT
GAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACTGTCTTGACTGTCAT
TGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGACGGCTGTGCCG
GCGTCGGCATCCTCGGTATCGCCTGGGCCTTCGGTGGCATGATCTTTGTC
CTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATTAACCCGGCAGT
GACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGTCCGTGCTGTGA
TGTACATGGTGGCGCAGTGCCTTGGTGCAATCTCCGGTGTTGGGTTGGTC
AAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGTGGGGCCAACGA
GCTGGCCGATGGGTACAGCACAGGCGTTGGATTGGCCGCCGAGATCATCG
GCACCCTTTGTGTGGTTTACACTGTCTCTCGGCACTGATCCC
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