FC876376

Overview
NameFC876376
Unique NameFC876376
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 2.554e-20
Identity = 65/168 (38.69%), Postives = 89/168 (52.98%), Query Frame = 2
Query:  206 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYK-----SQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGT----LCVVYTVSR 682
            A E  K  F+RA++AEF+A            +G+K     +QT    NV          ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+MY++AQC+GAI    ++     S  T    G N+LADG ++G GL  EIIGT    LCV+ T  R
Sbjct:    2 ASEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVK---------VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSS-LTGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDR 159          
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 96.6709 bits (239), Expect = 1.268e-19
Identity = 64/168 (38.10%), Postives = 88/168 (52.38%), Query Frame = 2
Query:  206 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYK-----SQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGT----LCVVYTVSR 682
            A E  K  F+RA++AEF+A            +G+K     +QT    NV          ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+MY++AQC+GAI    ++     S       G N+LADG ++G GL  EIIGT    LCV+ T  R
Sbjct:    2 ASEFKKKLFWRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDNVK---------VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSS-LPGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDR 159          
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 96.2857 bits (238), Expect = 1.656e-19
Identity = 62/163 (38.04%), Postives = 85/163 (52.15%), Query Frame = 2
Query:  206 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGT----LCVVYTVSR 682
            A E  K  F+RA++AEF+A            +G+        N    A    + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAVMY++AQC+GAI    ++     S       G NELA G ++G GL  EIIGT    LCV+ T  R
Sbjct:    2 ASEFKKKLFWRAVVAEFLAMILFVFISIGSALGFNYPV--RNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDN-SLGRNELAPGVNSGQGLGIEIIGTLQLVLCVLATTDR 161          
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 2.162e-19
Identity = 63/168 (37.50%), Postives = 89/168 (52.98%), Query Frame = 2
Query:  206 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGY-----KSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGT----LCVVYTVSR 682
            A E+ K  F+RA++AEF+A            +G+     ++QT    NV          ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAVMY++AQC+GAI    ++     S       G N+LA G ++G GL  EIIGT    LCV+ T  R
Sbjct:    2 ASEIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVK---------VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDN-SLGRNDLAHGVNSGQGLGIEIIGTLQLVLCVLATTDR 159          
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 94.7449 bits (234), Expect = 4.817e-19
Identity = 63/168 (37.50%), Postives = 89/168 (52.98%), Query Frame = 2
Query:  206 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGY-----KSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGT----LCVVYTVSR 682
            A E+ K  F+RA++AEF+A            +G+     ++QT    NV          ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAVMY++AQC+GAI    ++     S       G N+LA G ++G GL  EIIGT    LCV+ T  R
Sbjct:    2 ASEIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDNVK---------VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLEN-SLGRNDLARGVNSGQGLGIEIIGTLQLVLCVLATTDR 159          
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 6.291e-19
Identity = 62/163 (38.04%), Postives = 84/163 (51.53%), Query Frame = 2
Query:  206 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGT----LCVVYTVSR 682
            A E  K  F+RA++AEF+A            +G+  Q     N    A    + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAVMY++AQC+GAI    ++     S       G N LA G  +G GL  EIIGT    LCV+ T  R
Sbjct:    2 ASEFKKKIFWRAVVAEFLAMTLFIFISIGSALGF--QYPVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSS-LPGNSLGLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATTDR 161          
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18
Identity = 61/164 (37.20%), Postives = 86/164 (52.44%), Query Frame = 2
Query:  206 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGV-GILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGT----LCVVYTVSR 682
            A E  K  F+RA++AEF+A            +G+     P K+      V   + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RA+MY++AQC+GAI    ++     S       G N LA G ++G GL  EIIGT    LCV+ T  R
Sbjct:    2 ASEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHY---PIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDN-SLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDR 161          
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 6.955e-18
Identity = 61/164 (37.20%), Postives = 86/164 (52.44%), Query Frame = 2
Query:  206 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGV-GILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGT----LCVVYTVSR 682
            A E  K  F+RA++AEF+A            +G+     P K+      V   + ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RA+MY++AQC+GAI    ++     S       G N LA G ++G GL  EIIGT    LCV+ T  R
Sbjct:    2 ASEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHY---PIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDN-SLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDR 161          
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.186e-17
Identity = 56/163 (34.36%), Postives = 82/163 (50.31%), Query Frame = 2
Query:  206 AVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGT----LCVVYTVSR 682
            A E  K +F+RA+IAEF+A            +G+    +   N        I+ ++ AFG  I  +      +SG H+NPAVT G  L+ ++S+++AVMY++AQCLGA+    ++     S       G N L+ G S G GL  EI+ T    LCVV    R
Sbjct:    2 ASEFKKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKANQTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGI-TSGLENNSLGLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTDR 163          
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.198e-15
Identity = 50/150 (33.33%), Postives = 76/150 (50.67%), Query Frame = 2
Query:  227 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTLCVVYTV 676
            +F++A+ AEF+A            I +    +P         V ++ I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++V Y++AQCLGAI G G++           G G   +    + G GL  E+I T  +V+T+
Sbjct:   33 AFWKAVSAEFLATLIFVLLGVGSTINWGGSENPLP-------VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAGHGLLVELIITFQLVFTI 174          
The following BLAST results are available for this feature:
BLAST of FC876376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
AQP1_HUMAN2.554e-2038.69Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_PONAB1.268e-1938.10Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_CANFA1.656e-1938.04Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE2.162e-1937.50Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_RAT4.817e-1937.50Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_PIG6.291e-1938.04Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_BOVIN4.078e-1837.20Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP6.955e-1837.20Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQPA_RANES1.186e-1734.36Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP4_MOUSE7.198e-1533.33Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC32004A09EF DevOvary1 Citrus clementina cDNA clone C32004A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876376 ID=FC876376; Name=FC876376; organism=Citrus clementina; type=EST; length=692bp
GATCCAAAACAACCAAAAAAAAAAAAGAAAAAGAAAAAGGCTTCTCTCTC
GTTGTGCTTGTGGCTTTGCAGTGCTCTCAGTTTTCTCTGTTTCTCTCCAA
ATCATTGTTACTGGTTTTCCAATGGCGAAGGACACTGGGGTGGCAGAGCA
CGGCTCATATTCAGCCAAGGACTACACGGACCCACCGCCGGAGCCGCTAT
TCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAGCCTTGATAGCT
GAGTTCATAGCAACCCTGCTCTTTCTTTACGTCACTGTCTTGACTGTCAT
TGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGACGGCTGTGCCG
GCGTCGGCATCCTCGGTATCGCCTGGGCCTTCGGTGGCATGATCTTTGTC
CTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATTAACCCGGCAGT
GACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGTCCGTGCTGTGA
TGTACATGGTGGCGCAGTGCCTTGGTGCAATCTCCGGTGTTGGGTTGGTC
AAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGTGGGGCCAACGA
GCTGGCCGATGGGTACAGCACAGGCGTTGGATTGGCCGCCGAGATCATCG
GCACCCTTTGTGTGGTTTACACTGTCTCTCGGCACTGATCCC
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