FC876376
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11 Identity = 51/155 (32.90%), Postives = 70/155 (45.16%), Query Frame = 2 Query: 212 ELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTLCVVYTV 676 EL SF+RA+ AEF A +G + P + +L +A AFG + LV ISG H+NPAVTF + ++SL+RA YM AQ LGA++G ++ + R N L S G EI TL V + Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGSSLRWAPGP-------LHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHPAVSVGQATTVEIFLTLQFVLCI 145
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.235e-11 Identity = 51/155 (32.90%), Postives = 72/155 (46.45%), Query Frame = 2 Query: 227 SFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGCAG-VGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGV----GLAAEIIGTLCVVYTV 676 S +A ++EFIA + + T DG G++ IA A +FV V A ISGGH+NPAVT GL + ++L+ Y +AQCLG+I V + T G + G S G+ G+ EI+ T +VYTV Sbjct: 16 SSLKAYLSEFIATLLFVFAGVGSAVAFAKLTS-----DGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSI-----VACLLLVFVT---NGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTV 157
BLAST of FC876376 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.235e-11 Identity = 40/117 (34.19%), Postives = 62/117 (52.99%), Query Frame = 2 Query: 344 CAGVGI------LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTLCVVYTV 676 C GV I + IA FG +I +V C +SG HINPAVT GL + +S+++A+ Y++ QC+GAI+G ++K + + R LA G + +G E T ++ V Sbjct: 47 CTGVQISEGDVVVRIALTFGFIIATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEF-RGTLCMTSLAPGVTPPMGFLVEACITFVLILLV 162 The following BLAST results are available for this feature:
BLAST of FC876376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876376 ID=FC876376; Name=FC876376; organism=Citrus clementina; type=EST; length=692bpback to top |