FC876377

Overview
NameFC876377
Unique NameFC876377
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10441 contig Ccv1_Contig10441:221..948. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PALY_CAMSI (Phenylalanine ammonia-lyase OS=Camellia sinensis GN=PAL PE=2 SV=1)

HSP 1 Score: 396.356 bits (1017), Expect = 8.432e-110
Identity = 207/246 (84.15%), Postives = 218/246 (88.62%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT--SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D LNWGV AE +KGSHLEEVK MV E+RKPVV LGGETLT++QVAAIA   S   VELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFGNGTES HTLP SATRAAMLVR+NTLLQGYSGIRFEILEAI+K LN+NITPCLPLRGTITASGDLVPLSYIAGLL GR NSKA GP GEI+  +EA + AG   GFFELQPKEGLAL +GTAVGSGLAS
Sbjct:   23 DPLNWGVAAEAMKGSHLEEVKGMVEEFRKPVVRLGGETLTISQVAAIAVRGSEVAVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKEGGALQKELIRFLNAGIFGNGTESCHTLPQSATRAAMLVRINTLLQGYSGIRFEILEAISKFLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRHNSKAVGPTGEILHPKEAFRLAGVEGGFFELQPKEGLALVNGTAVGSGLAS 268          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL1_PEA (Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=PAL1 PE=2 SV=1)

HSP 1 Score: 394.815 bits (1013), Expect = 2.453e-109
Identity = 206/246 (83.74%), Postives = 221/246 (89.84%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSS--TNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEA--SKQAGFGFFELQPKEGLALCHGTAVGSGLAS 728
            D LNWGV AE +KGSHL+EVKRMV EYRKPVV LGGETLT++QVAAIA       VELSESAR GVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFGNGTESSHTLPH+ATRAAMLVR+NTLLQGYSGIRFEILEAITKL+N+N+TPCL LRGTITASGDLVPLSYIAGLL GRPNSKA G +GEI++A+EA  S +   GFFELQPKEGLAL +GTAVGSGLAS
Sbjct:   33 DPLNWGVAAEAMKGSHLDEVKRMVEEYRKPVVRLGGETLTISQVAAIAAHDHGVKVELSESARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESSHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLINNNVTPCL-LRGTITASGDLVPLSYIAGLLTGRPNSKAHGTSGEILNAKEAFQSAEINDGFFELQPKEGLALVNGTAVGSGLAS 277          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PALY_STYHU (Phenylalanine ammonia-lyase OS=Stylosanthes humilis GN=PAL17.1 PE=2 SV=1)

HSP 1 Score: 393.66 bits (1010), Expect = 5.465e-109
Identity = 200/246 (81.30%), Postives = 222/246 (90.24%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSS--TNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFG--FFELQPKEGLALCHGTAVGSGLAS 728
            D LNW   AE LKGSHL+EVKRMV+EYRKP+VNLGG+TLT++QVAAIA +    +V+LSE++R GVKASSDWVM+SMN GTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFGNGTE++ TLPH+ATRAAMLVR+NTLLQGYSGIRFEILEAITKLLN+NITPCLPLRGTITASGDLVPLSYIAGLL GRPNSKA GPNGE ++A+EA + AG G  FFELQPKEGLAL +GT VGSGLAS
Sbjct:   24 DPLNWAAAAEALKGSHLDEVKRMVSEYRKPLVNLGGQTLTISQVAAIAANDQGVSVQLSEASRAGVKASSDWVMDSMNNGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTETNCTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGETLNAKEAFQAAGIGSDFFELQPKEGLALVNGTPVGSGLAS 269          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL2_POPKI (Phenylalanine ammonia-lyase G2B OS=Populus kitakamiensis GN=PALG2B PE=3 SV=1)

HSP 1 Score: 393.66 bits (1010), Expect = 5.465e-109
Identity = 202/246 (82.11%), Postives = 215/246 (87.40%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSSTNV--ELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D LNWG+ AE+LKGSHL+EVKRM+ EYR PVV LGGETLT+ QV AIA+    V  ELSE AR GVKASSDWVM+SM+KGTDSYGVTTGFGATSHRRTK GG LQKELIRFLNAGIFGNGTESSHTLP SATRAAMLVR NTLLQGYSGIRFE+LEAITK++NHNITPCLPLRGTITASGDLVPLSYIAGLL GRPNSKA GPNGE +   EA  QAG   GFFELQPKEGLAL +GTAVGSGLAS
Sbjct:   20 DPLNWGMAAESLKGSHLDEVKRMIEEYRNPVVKLGGETLTIGQVTAIASRDVGVMVELSEEARAGVKASSDWVMDSMSKGTDSYGVTTGFGATSHRRTKQGGELQKELIRFLNAGIFGNGTESSHTLPRSATRAAMLVRTNTLLQGYSGIRFEMLEAITKMINHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGEPLTPAEAFTQAGIDGGFFELQPKEGLALVNGTAVGSGLAS 265          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL1_ARATH (Phenylalanine ammonia-lyase 1 OS=Arabidopsis thaliana GN=PAL1 PE=1 SV=3)

HSP 1 Score: 393.66 bits (1010), Expect = 5.465e-109
Identity = 203/246 (82.52%), Postives = 220/246 (89.43%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT--SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D LNWG  AE +KGSHL+EVKRMVAE+RKPVVNLGGETLT+ QVAAI+T  +S  VELSE+AR GV ASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNG ALQKELIRFLNAGIFG+  E+SHTLPHSATRAAMLVR+NTLLQG+SGIRFEILEAIT  LN+NITP LPLRGTITASGDLVPLSYIAGLL GRPNSKATGPNGE + A+EA K AG   GFF+LQPKEGLAL +GTAVGSG+AS
Sbjct:   34 DPLNWGAAAEQMKGSHLDEVKRMVAEFRKPVVNLGGETLTIGQVAAISTIGNSVKVELSETARAGVNASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGVALQKELIRFLNAGIFGSTKETSHTLPHSATRAAMLVRINTLLQGFSGIRFEILEAITSFLNNNITPSLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPNGEALTAEEAFKLAGISSGFFDLQPKEGLALVNGTAVGSGMAS 279          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PALY_DIGLA (Phenylalanine ammonia-lyase OS=Digitalis lanata PE=2 SV=1)

HSP 1 Score: 393.275 bits (1009), Expect = 7.138e-109
Identity = 203/247 (82.19%), Postives = 217/247 (87.85%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSSTNV--ELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFG---FFELQPKEGLALCHGTAVGSGLAS 728
            D LNW   AE LKGSHL+EVKRMV E+RK VV LGGETLT++QVAAIA     V  +L+ES+R GVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFGNGTES+HTLPHSATRAAMLVR+NTLLQGYSGIRFEILE ITK LNHNITPCLPLRGTITASGDLVPLSYIAGLL GRPNSKA GPNGE ++A++A K AG     FFELQPKEGLAL +GTAVGSGLAS
Sbjct:   21 DPLNWVAAAEELKGSHLDEVKRMVEEFRKTVVKLGGETLTISQVAAIAARDNEVAVQLAESSRAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESTHTLPHSATRAAMLVRINTLLQGYSGIRFEILETITKFLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGESLNAEQAFKLAGANSGLFFELQPKEGLALVNGTAVGSGLAS 267          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL1_LITER (Phenylalanine ammonia-lyase 1 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 392.889 bits (1008), Expect = 9.322e-109
Identity = 201/246 (81.71%), Postives = 219/246 (89.02%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT--SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D LNW + +E++KGSHL+EVK MVAE+RKPVV L G+TLT+ QVAAIA       VEL+E+AREGVKASSDWVM+SMNKGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFGNGTE+SHTLPHSATRAAMLVR+NTLLQGYSGIRFEILEAITK LN NITPCLPLRGTITASGDLVPLSYIAGLL GRPNSKA GP GE I+A+EA + AG   GFFELQPKEGLAL +GTAVGSG+AS
Sbjct:   19 DPLNWEMASESMKGSHLDEVKNMVAEFRKPVVQLAGKTLTIGQVAAIAARDDGVTVELAEAAREGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTETSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNTNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPTGEKINAEEAFRLAGISTGFFELQPKEGLALVNGTAVGSGMAS 264          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL2_PEA (Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 391.734 bits (1005), Expect = 2.077e-108
Identity = 204/246 (82.93%), Postives = 221/246 (89.84%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSS--TNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D LNWGV AE +KGSHL+EVKRMV EYRKPVV LGGETLT++QVAAIA       VELSESAR GVKASSDWVMESMNKGTDSYGVTT  GATSHRRTK GGALQKELIRFLNAGIFGNG+ES+HTLPH+ATRAAMLVR+NTLLQGYSGIRFEILEAITKL+N+N+TPCL LRGTITASGDLVPLSYIAGLL GRPNSKA GP+GEI++A+EA + AG   GFFELQPKEGLAL +GTAVGSGLAS
Sbjct:   34 DPLNWGVAAEAMKGSHLDEVKRMVDEYRKPVVRLGGETLTISQVAAIAAHDHGVKVELSESARAGVKASSDWVMESMNKGTDSYGVTTVHGATSHRRTKQGGALQKELIRFLNAGIFGNGSESTHTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKLINNNVTPCL-LRGTITASGDLVPLSYIAGLLTGRPNSKAHGPSGEILNAREAFQSAGINDGFFELQPKEGLALVNGTAVGSGLAS 278          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL1_PRUAV (Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=PAL1 PE=2 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 3.543e-108
Identity = 200/246 (81.30%), Postives = 217/246 (88.21%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT--SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D LNWGV AETLKGSHL+EVKRMVAEYRKPVV LGGE+LT++QVAAIAT  S   VELSESAR GVKASSDWVM+SM+KGTDSYGVTTGFGATSHRRTK G ALQKELIRFLNAG+FG+  ES HTLPH ATRAAMLVR+NTLLQGYSGIRFEILE ITK LN+N+TPCLPLRGTITASGDLVPLSYIAG+L GRPNSKA GP+G+ + A EA +  G   GFFELQPKEGLAL +GTAVGSGLAS
Sbjct:   26 DPLNWGVAAETLKGSHLDEVKRMVAEYRKPVVKLGGESLTISQVAAIATHDSGVKVELSESARAGVKASSDWVMDSMSKGTDSYGVTTGFGATSHRRTKQGAALQKELIRFLNAGVFGSTKESGHTLPHQATRAAMLVRINTLLQGYSGIRFEILEVITKFLNNNVTPCLPLRGTITASGDLVPLSYIAGMLTGRPNSKAVGPDGQTLSAAEAFEFVGINSGFFELQPKEGLALVNGTAVGSGLAS 271          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PALY_MEDSA (Phenylalanine ammonia-lyase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 390.193 bits (1001), Expect = 6.043e-108
Identity = 201/246 (81.71%), Postives = 218/246 (88.62%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSS--TNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFG--FFELQPKEGLALCHGTAVGSGLAS 728
            D LNWGV AE +KGSHL+EVKRMVAEYRKPVV LGGETLT++QVAAIA       V+LSESAR+GVKASS+WVMESMNKGTDSYGVTTGFGATSH RTK GGALQKELIRFLNAGIFGNGTES+HTLP +ATRAAMLVR+NTLLQGYSGI FEILEAITK LN  +TPCLPLRGTITASGDLVPLSYIAGLL GRPNSKA GP+GE+++A+EA   AG    FFELQPKEGLAL +GTAVGSGLAS
Sbjct:   34 DPLNWGVAAEAMKGSHLDEVKRMVAEYRKPVVRLGGETLTISQVAAIAAHDHGVQVDLSESARDGVKASSEWVMESMNKGTDSYGVTTGFGATSHSRTKQGGALQKELIRFLNAGIFGNGTESNHTLPKTATRAAMLVRINTLLQGYSGIDFEILEAITKPLNKTVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAHGPSGEVLNAKEAFNLAGINAEFFELQPKEGLALVNGTAVGSGLAS 279          
The following BLAST results are available for this feature:
BLAST of FC876377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
PALY_CAMSI8.432e-11084.15Phenylalanine ammonia-lyase OS=Camellia sinensis G... [more]
PAL1_PEA2.453e-10983.74Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=... [more]
PALY_STYHU5.465e-10981.30Phenylalanine ammonia-lyase OS=Stylosanthes humili... [more]
PAL2_POPKI5.465e-10982.11Phenylalanine ammonia-lyase G2B OS=Populus kitakam... [more]
PAL1_ARATH5.465e-10982.52Phenylalanine ammonia-lyase 1 OS=Arabidopsis thali... [more]
PALY_DIGLA7.138e-10982.19Phenylalanine ammonia-lyase OS=Digitalis lanata PE... [more]
PAL1_LITER9.322e-10981.71Phenylalanine ammonia-lyase 1 OS=Lithospermum eryt... [more]
PAL2_PEA2.077e-10882.93Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=... [more]
PAL1_PRUAV3.543e-10881.30Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=P... [more]
PALY_MEDSA6.043e-10881.71Phenylalanine ammonia-lyase OS=Medicago sativa PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32004A10EF DevOvary1 Citrus clementina cDNA clone C32004A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876377 ID=FC876377; Name=FC876377; organism=Citrus clementina; type=EST; length=728bp
GGGATGCGTTGAACTGGGGAGTGATGGCGGAGACGTTGAAGGGGAGCCAT
TTGGAGGAAGTGAAGCGTATGGTGGCGGAGTACAGGAAGCCGGTGGTCAA
CCTCGGTGGTGAGACGTTGACCGTAGCACAGGTGGCTGCCATTGCCACGT
CCTCTACGAATGTGGAGCTGTCGGAATCTGCCAGGGAAGGCGTCAAGGCC
AGCAGTGATTGGGTGATGGAGAGCATGAATAAGGGTACCGACAGTTACGG
CGTTACCACTGGCTTTGGTGCCACTTCTCATCGGAGAACCAAGAACGGCG
GTGCTCTTCAGAAGGAGCTCATTAGATTTTTGAACGCTGGAATCTTTGGA
AACGGAACAGAGTCATCTCACACGCTACCTCACTCAGCAACAAGGGCAGC
CATGCTTGTGAGGGTTAACACTCTTCTCCAGGGCTACTCCGGCATCCGAT
TTGAAATCCTGGAAGCGATCACAAAGCTGCTCAATCACAACATCACTCCA
TGCCTCCCTCTTCGCGGCACAATCACTGCTTCAGGGGATCTGGTTCCTCT
TTCCTACATTGCCGGACTGCTCGCCGGCCGGCCCAATTCTAAGGCCACCG
GGCCTAATGGAGAGATCATTGATGCCCAGGAAGCCTCTAAACAAGCGGGT
TTCGGGTTCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCTCTTTGTCATGG
CACTGCTGTTGGTTCTGGCCTGGCTTCT
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