FC876377

Overview
NameFC876377
Unique NameFC876377
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_SALPK (Histidine ammonia-lyase OS=Salmonella paratyphi A (strain AKU_12601) GN=hutH PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22
Identity = 66/205 (32.20%), Postives = 111/205 (54.15%), Query Frame = 3
Query:  117 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            L+++Q+  +      + L  SA +G+ AS   V + + +G  +YG+ TGFG  +  R  +     LQ+ L+    AG+          L  +  R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL +GT   +  A
Sbjct:   11 LSLSQLYDVWRHPVQLRLDASAIDGINASVACVNDIVAEGRTAYGINTGFGLLAQTRIADEDLQNLQRSLVLSHAAGV-------GDPLDDAMVRLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQAALKKAGLEPVALAAKEGLALLNGTQASTAFA 205          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_SALPC (Histidine ammonia-lyase OS=Salmonella paratyphi C (strain RKS4594) GN=hutH PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22
Identity = 66/205 (32.20%), Postives = 111/205 (54.15%), Query Frame = 3
Query:  117 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            L+++Q+  +      + L  SA +G+ AS   V + + +G  +YG+ TGFG  +  R  +     LQ+ L+    AG+          L  +  R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL +GT   +  A
Sbjct:   11 LSLSQLYDVWRHPVQLRLDASAIDGINASVACVNDIVAEGRTAYGINTGFGLLAQTRIADEDLQNLQRSLVLSHAAGV-------GDPLDDAMVRLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFA 205          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_SALPA (Histidine ammonia-lyase OS=Salmonella paratyphi A GN=hutH PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22
Identity = 66/205 (32.20%), Postives = 111/205 (54.15%), Query Frame = 3
Query:  117 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            L+++Q+  +      + L  SA +G+ AS   V + + +G  +YG+ TGFG  +  R  +     LQ+ L+    AG+          L  +  R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL +GT   +  A
Sbjct:   11 LSLSQLYDVWRHPVQLRLDASAIDGINASVACVNDIVAEGRTAYGINTGFGLLAQTRIADEDLQNLQRSLVLSHAAGV-------GDPLDDAMVRLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQAALKKAGLEPVALAAKEGLALLNGTQASTAFA 205          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_SALNS (Histidine ammonia-lyase OS=Salmonella newport (strain SL254) GN=hutH PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22
Identity = 66/205 (32.20%), Postives = 111/205 (54.15%), Query Frame = 3
Query:  117 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            L+++Q+  +      + L  SA +G+ AS   V + + +G  +YG+ TGFG  +  R  +     LQ+ L+    AG+          L  +  R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL +GT   +  A
Sbjct:   11 LSLSQLYDVWRHPVQLRLDASAIDGINASVACVNDIVAEGRTAYGINTGFGLLAQTRIADEDLQNLQRSLVLSHAAGV-------GDPLDDAMVRLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFA 205          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_SALHS (Histidine ammonia-lyase OS=Salmonella heidelberg (strain SL476) GN=hutH PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22
Identity = 66/205 (32.20%), Postives = 111/205 (54.15%), Query Frame = 3
Query:  117 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            L+++Q+  +      + L  SA +G+ AS   V + + +G  +YG+ TGFG  +  R  +     LQ+ L+    AG+          L  +  R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL +GT   +  A
Sbjct:   11 LSLSQLYDVWRHPVQLRLDASAIDGINASVACVNDIVAEGRTAYGINTGFGLLAQTRIADEDLQNLQRSLVLSHAAGV-------GDPLDDAMVRLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFA 205          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_SALG2 (Histidine ammonia-lyase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=hutH PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22
Identity = 66/205 (32.20%), Postives = 111/205 (54.15%), Query Frame = 3
Query:  117 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            L+++Q+  +      + L  SA +G+ AS   V + + +G  +YG+ TGFG  +  R  +     LQ+ L+    AG+          L  +  R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL +GT   +  A
Sbjct:   11 LSLSQLYDVWRHPVQLRLDASAIDGINASVACVNDIVAEGRTAYGINTGFGLLAQTRIADEDLQNLQRSLVLSHAAGV-------GDPLDDAMVRLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFA 205          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_SALEP (Histidine ammonia-lyase OS=Salmonella enteritidis PT4 (strain P125109) GN=hutH PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22
Identity = 66/205 (32.20%), Postives = 111/205 (54.15%), Query Frame = 3
Query:  117 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            L+++Q+  +      + L  SA +G+ AS   V + + +G  +YG+ TGFG  +  R  +     LQ+ L+    AG+          L  +  R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL +GT   +  A
Sbjct:   11 LSLSQLYDVWRHPVQLRLDASAIDGINASVACVNDIVAEGRTAYGINTGFGLLAQTRIADEDLQNLQRSLVLSHAAGV-------GDPLDDAMVRLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFA 205          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_SALDC (Histidine ammonia-lyase OS=Salmonella dublin (strain CT_02021853) GN=hutH PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22
Identity = 66/205 (32.20%), Postives = 111/205 (54.15%), Query Frame = 3
Query:  117 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            L+++Q+  +      + L  SA +G+ AS   V + + +G  +YG+ TGFG  +  R  +     LQ+ L+    AG+          L  +  R  M++++N+L +G+SGIR  ++EA+  L+N  + P +P +G++ ASGDL PL++++  L G   ++     GE + AQ A K+AG     L  KEGLAL +GT   +  A
Sbjct:   11 LSLSQLYDVWRHPVQLRLDASAIDGINASVACVNDIVAEGRTAYGINTGFGLLAQTRIADEDLQNLQRSLVLSHAAGV-------GDPLDDAMVRLIMVLKINSLARGFSGIRLSVIEALIALVNAGVYPLIPAKGSVGASGDLAPLAHLSLTLLGEGKARW---QGEWLPAQTALKKAGLEPVALAAKEGLALLNGTQASTAFA 205          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_KLEP7 (Histidine ammonia-lyase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=hutH PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22
Identity = 65/205 (31.71%), Postives = 110/205 (53.66%), Query Frame = 3
Query:  117 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRR--TKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            L+++Q+  I +   N+ L   A   +  S   V   + +G  +YG+ TGFG  +  R  T++   LQ+ L+    AG+          L     R  M++++N+L +G+SGIR  +++A+  L+N  +TP +P +G++ ASGDL PL++++  L G   ++  G  G+ + A EA +Q G     L  KEGLAL +GT   +  A
Sbjct:   11 LSLSQLRDIYSHPVNITLDSGAFAAIDESVACVNAILAEGRTAYGINTGFGLLAQTRISTEDLENLQRSLVLSHAAGV-------GEPLDDDLARLIMVLKINSLSRGFSGIRLSVIQALIGLVNAGVTPWIPAKGSVGASGDLAPLAHMSLTLLGEGKARVRG--GDWLPATEALRQVGLEPITLAAKEGLALLNGTQASTAFA 206          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_BACSK (Histidine ammonia-lyase OS=Bacillus clausii (strain KSM-K16) GN=hutH PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22
Identity = 70/206 (33.98%), Postives = 109/206 (52.91%), Query Frame = 3
Query:   93 VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGT 704
            +V L G +LT+  + AI      V LS+S    ++AS   V + +  G   YG+ TGFG  S  +        LQ+ LI     G+ G  ++         ++A M++R N L +G+SG+R E++E + +L+N +I PC+P +G++ ASGDL PLS++A +L G    +     GE +       + G     LQ KEGLAL +GT
Sbjct:    1 MVILTGRSLTLDDMEAILYKGVKVGLSQSCINEIEASRRAVEKIVQDGRTVYGINTGFGKFSDVQIAAADTEELQRNLILSHACGVGGYFSDE-------ISQAMMVLRANALAKGFSGVRLEVVEMLLELINKDIYPCIPSQGSLGASGDLAPLSHLALVLIGEGEVRY---RGECMSTASCFAKLGIQPLTLQAKEGLALINGT 196          
The following BLAST results are available for this feature:
BLAST of FC876377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
HUTH_SALPK1.022e-2232.20Histidine ammonia-lyase OS=Salmonella paratyphi A ... [more]
HUTH_SALPC1.022e-2232.20Histidine ammonia-lyase OS=Salmonella paratyphi C ... [more]
HUTH_SALPA1.022e-2232.20Histidine ammonia-lyase OS=Salmonella paratyphi A ... [more]
HUTH_SALNS1.022e-2232.20Histidine ammonia-lyase OS=Salmonella newport (str... [more]
HUTH_SALHS1.022e-2232.20Histidine ammonia-lyase OS=Salmonella heidelberg (... [more]
HUTH_SALG21.022e-2232.20Histidine ammonia-lyase OS=Salmonella gallinarum (... [more]
HUTH_SALEP1.022e-2232.20Histidine ammonia-lyase OS=Salmonella enteritidis ... [more]
HUTH_SALDC1.022e-2232.20Histidine ammonia-lyase OS=Salmonella dublin (stra... [more]
HUTH_KLEP71.022e-2231.71Histidine ammonia-lyase OS=Klebsiella pneumoniae s... [more]
HUTH_BACSK1.022e-2233.98Histidine ammonia-lyase OS=Bacillus clausii (strai... [more]

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Properties
Property NameValue
Genbank descriptionC32004A10EF DevOvary1 Citrus clementina cDNA clone C32004A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876377 ID=FC876377; Name=FC876377; organism=Citrus clementina; type=EST; length=728bp
GGGATGCGTTGAACTGGGGAGTGATGGCGGAGACGTTGAAGGGGAGCCAT
TTGGAGGAAGTGAAGCGTATGGTGGCGGAGTACAGGAAGCCGGTGGTCAA
CCTCGGTGGTGAGACGTTGACCGTAGCACAGGTGGCTGCCATTGCCACGT
CCTCTACGAATGTGGAGCTGTCGGAATCTGCCAGGGAAGGCGTCAAGGCC
AGCAGTGATTGGGTGATGGAGAGCATGAATAAGGGTACCGACAGTTACGG
CGTTACCACTGGCTTTGGTGCCACTTCTCATCGGAGAACCAAGAACGGCG
GTGCTCTTCAGAAGGAGCTCATTAGATTTTTGAACGCTGGAATCTTTGGA
AACGGAACAGAGTCATCTCACACGCTACCTCACTCAGCAACAAGGGCAGC
CATGCTTGTGAGGGTTAACACTCTTCTCCAGGGCTACTCCGGCATCCGAT
TTGAAATCCTGGAAGCGATCACAAAGCTGCTCAATCACAACATCACTCCA
TGCCTCCCTCTTCGCGGCACAATCACTGCTTCAGGGGATCTGGTTCCTCT
TTCCTACATTGCCGGACTGCTCGCCGGCCGGCCCAATTCTAAGGCCACCG
GGCCTAATGGAGAGATCATTGATGCCCAGGAAGCCTCTAAACAAGCGGGT
TTCGGGTTCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCTCTTTGTCATGG
CACTGCTGTTGGTTCTGGCCTGGCTTCT
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