FC876377

Overview
NameFC876377
Unique NameFC876377
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_BURS3 (Histidine ammonia-lyase OS=Burkholderia sp. (strain 383) GN=hutH PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.071e-22
Identity = 67/205 (32.68%), Postives = 110/205 (53.66%), Query Frame = 3
Query:  117 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFG--ATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            LT+ Q+  IA  S  + L  ++   + A +  V +   KG  +YG+ TGFG  A++H        LQK L+     G+          +  S+ R  M +++++L +G+SGIR E+++A+ KL N ++ P +P++G++ ASGDL PL++++ +L G          GE   A +  + AG     LQ KEGLAL +GT   + LA
Sbjct:    9 LTLPQLRQIARESVQLTLDPASFAKIDAGAKAVADIAAKGEPAYGINTGFGRLASTHIPHDQLELLQKNLVLSHAVGV-------GEPMARSSVRLLMALKLSSLGRGHSGIRREVMDALIKLFNADVLPLIPVKGSVGASGDLAPLAHMSAVLLG---VGEVFIRGERASALDGLRVAGLAPLTLQAKEGLALLNGTQASTALA 203          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_STRCO (Histidine ammonia-lyase OS=Streptomyces coelicolor GN=hutH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.623e-22
Identity = 72/205 (35.12%), Postives = 104/205 (50.73%), Query Frame = 3
Query:   96 VNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGA--TSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGT 704
            V +G   +T + V A+A +   +ELSE A   + A+   V     K    YGV+TGFGA  T H   +  G LQ+ ++R   AG+          +     RA M +R+ T+  G +G+R E+ + +  +LN  ITP +   G++  SGDL PLS+ A  L G     A GP+G +  A E     G    EL+ KEGLAL +GT
Sbjct:    4 VVVGTSGVTASDVLAVARAGARIELSEEAVAALAAARSVVDALAAKPDPVYGVSTGFGALATRHISPELRGRLQRNIVRSHAAGM-------GPRVEREVVRALMFLRLKTVCSGRTGVRPEVAQTMADVLNAGITPVVHEYGSLGCSGDLAPLSHCALTLMG--EGDAEGPDGTVRPAGELLAAHGIAPVELREKEGLALLNGT 199          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_PHOPR (Histidine ammonia-lyase OS=Photobacterium profundum GN=hutH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.623e-22
Identity = 65/205 (31.71%), Postives = 115/205 (56.10%), Query Frame = 3
Query:  117 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRR--TKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            L++ Q+  ++   T + L+E A   +  S++ V + +      YG+ TGFG  ++ R   ++   LQ+ ++    AGI   GT     +  +  R  ++++VN+L +GYSGIR  ++ A+ +L+N  + PC+P +G++ ASGDL PL++++ +L G   ++     GE+I   +A + AG     L PKEGLAL +GT   +  A
Sbjct:   11 LSLKQLREVSRQPTQLSLTEDALPEMLISAEAVAQVIKDDKVVYGINTGFGLLANTRIAAEDLETLQRSIVLSHAAGI---GT----FMDDATVRMMIVLKVNSLSRGYSGIRPLVVNALMQLVNTEVYPCIPKKGSVGASGDLAPLAHMSTVLLGEGEARY---QGEVITGAQALEIAGLEPITLAPKEGLALLNGTQASTAFA 205          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_CHRVO (Histidine ammonia-lyase OS=Chromobacterium violaceum GN=hutH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.623e-22
Identity = 65/214 (30.37%), Postives = 113/214 (52.80%), Query Frame = 3
Query:   93 VVNLGGETLTVAQVAAIATSS-TNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFG--ATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            ++N+    LT+A++  ++  +   ++L  S+   + AS+  V   +++G   YG+ TGFG  A++    +    LQ+ ++    AGI          +  S  R  M +++N+L +G+SGIR +++EA+  L N  I P +P +G++ ASGDL PLS+++ +L G   +   G     +    A + AG     L PKEGLAL +GT   +  A
Sbjct:    3 ILNIVPGRLTLAELRRVSRETGLQLQLDPSSHAAIDASAATVARVLSEGRTVYGINTGFGLLASTKIAPEELELLQRSIVLSHAAGI-------GAPMDDSTVRLVMALKINSLARGFSGIRRQVIEALVTLFNRQIYPVIPQKGSVGASGDLAPLSHMSAVLIGEGEAFVDGVR---VPGSVAMRSAGLEPITLAPKEGLALLNGTQASTAFA 206          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_PSEAB (Histidine ammonia-lyase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=hutH PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.650e-22
Identity = 68/205 (33.17%), Postives = 108/205 (52.68%), Query Frame = 3
Query:  117 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            LT+A +     +   + L  SA   V AS   V   + +G  +YG+ TGFG  +  R        LQ+ ++    AG+          L  +  R  ML++VN+L +G+SGIR ++++A+  L+N  + P +PL+G++ ASGDL PL++++ +L G   ++     GE + A EA   AG     L  KEGLAL +GT V +  A
Sbjct:   10 LTLADLRQAYLAPVRLSLDPSADAPVAASVACVENIIAEGRTAYGINTGFGLLASTRISPADLEKLQRSIVLSHAAGV-------GEALDDAMVRLVMLLKVNSLARGFSGIRRKVIDALIALINAEVYPHIPLKGSVGASGDLAPLAHMSLVLIGESRAR---HRGEWLPAAEALAVAGLEPLTLAAKEGLALLNGTQVSTAYA 204          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_ALKOO (Histidine ammonia-lyase OS=Alkaliphilus oremlandii (strain OhILAs) GN=hutH PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.650e-22
Identity = 70/213 (32.86%), Postives = 108/213 (50.70%), Query Frame = 3
Query:   96 VNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGG--ALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLAS 728
            + + GE LT+  +  +  +   +ELSE A+  V+ +   V   + +    YG+TTGFG  S          ALQ+ LI     G+        + L     R  ML+R N L +GYSGIR E L  + ++LN  + P +P +G++ ASGDL PLS++  +L G   +      G+ +  +EA + AG     L  KEGLAL +GT V + + +
Sbjct:    4 IMIDGEQLTLQDIIHVTRNFYEIELSEDAKNRVRNNRKVVDRYVEEEKVVYGITTGFGKFSDVVISKSETEALQRNLIISHACGV-------GNPLEEDVVRGIMLLRANALSKGYSGIRLETLSTLIEMLNKGVHPVIPEKGSLGASGDLAPLSHMVLVLIGEGEAIY---QGKRMSGREAMEAAGIRPVVLTSKEGLALINGTQVMTAIGA 206          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_PSEAE (Histidine ammonia-lyase OS=Pseudomonas aeruginosa GN=hutH PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.130e-21
Identity = 67/205 (32.68%), Postives = 108/205 (52.68%), Query Frame = 3
Query:  117 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            LT+A +     +   + L  SA   + AS   V   + +G  +YG+ TGFG  +  R        LQ+ ++    AG+          L  +  R  ML++VN+L +G+SGIR ++++A+  L+N  + P +PL+G++ ASGDL PL++++ +L G   ++     GE + A EA   AG     L  KEGLAL +GT V +  A
Sbjct:   10 LTLADLRQAYLAPVRLSLDPSADAPIAASVACVENIIAEGRTAYGINTGFGLLASTRISPADLEKLQRSIVLSHAAGV-------GEALDDAMVRLVMLLKVNSLARGFSGIRRKVIDALIALINAEVYPHIPLKGSVGASGDLAPLAHMSLVLIGESRAR---HRGEWLPAAEALAVAGLEPLTLAAKEGLALLNGTQVSTAYA 204          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_PSEA8 (Histidine ammonia-lyase OS=Pseudomonas aeruginosa (strain LESB58) GN=hutH PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.130e-21
Identity = 67/205 (32.68%), Postives = 108/205 (52.68%), Query Frame = 3
Query:  117 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            LT+A +     +   + L  SA   + AS   V   + +G  +YG+ TGFG  +  R        LQ+ ++    AG+          L  +  R  ML++VN+L +G+SGIR ++++A+  L+N  + P +PL+G++ ASGDL PL++++ +L G   ++     GE + A EA   AG     L  KEGLAL +GT V +  A
Sbjct:   10 LTLADLRQAYLAPVRLSLDPSADAPIAASVACVENIIAEGRTAYGINTGFGLLASTRISPADLEKLQRSIVLSHAAGV-------GEALDDAMVRLVMLLKVNSLARGFSGIRRKVIDALIALINAEVYPHIPLKGSVGASGDLAPLAHMSLVLIGESRAR---HRGEWLPAAEALAVAGLEPLTLAAKEGLALLNGTQVSTAYA 204          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_BURVG (Histidine ammonia-lyase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=hutH PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.130e-21
Identity = 66/205 (32.20%), Postives = 110/205 (53.66%), Query Frame = 3
Query:  117 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFG--ATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            LT+ Q+  IA  S  ++L  ++   + A +  V +   KG  +YG+ TGFG  A++H        LQK L+     G+          +  S+ R  M +++++L +G+SGIR E+++A+  L N ++ P +P++G++ ASGDL PL++++ +L G          GE   A +  + AG     LQ KEGLAL +GT   + LA
Sbjct:    9 LTLPQLRRIARESVQLQLDPASFAKIDAGAKAVADIAAKGEPAYGINTGFGRLASTHIPHDQLELLQKNLVLSHAVGV-------GEPMARSSVRLLMALKLSSLGRGHSGIRREVMDALITLFNADVLPLIPVKGSVGASGDLAPLAHMSAVLLG---VGEVFIRGERASALDGLRVAGLAPLTLQAKEGLALLNGTQASTALA 203          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_ACIAC (Histidine ammonia-lyase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=hutH PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.130e-21
Identity = 68/214 (31.78%), Postives = 109/214 (50.93%), Query Frame = 3
Query:   90 PVVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNG--GALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            P + L    +T+A++ AIA     + L  SA  G++AS   V     +    YG+ TGFG  +  +  +     LQ+ L+   + G       +   LP    R  +  +  +L +G+SG+R  +++A+  L N ++ P +P +G++ ASGDL PL+++A +L G     A    G I+  +EA    G   F L PKEGLAL +GT V + LA
Sbjct:    5 PTLVLHPGRVTLAELRAIAAGGQRLALDASALAGMRASQATVDRIALEEQVVYGINTGFGKLASTKIAHDRLAELQRNLVLSHSVG-------TGDPLPDGVVRMVLATKAVSLARGHSGVRPALVDALLALANADVLPVIPAKGSVGASGDLAPLAHLACVLIG---EGAAQVGGRIVTGREAMAAVGLEPFVLGPKEGLALLNGTQVSTALA 208          
The following BLAST results are available for this feature:
BLAST of FC876377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
HUTH_BURS35.071e-2232.68Histidine ammonia-lyase OS=Burkholderia sp. (strai... [more]
HUTH_STRCO6.623e-2235.12Histidine ammonia-lyase OS=Streptomyces coelicolor... [more]
HUTH_PHOPR6.623e-2231.71Histidine ammonia-lyase OS=Photobacterium profundu... [more]
HUTH_CHRVO6.623e-2230.37Histidine ammonia-lyase OS=Chromobacterium violace... [more]
HUTH_PSEAB8.650e-2233.17Histidine ammonia-lyase OS=Pseudomonas aeruginosa ... [more]
HUTH_ALKOO8.650e-2232.86Histidine ammonia-lyase OS=Alkaliphilus oremlandii... [more]
HUTH_PSEAE1.130e-2132.68Histidine ammonia-lyase OS=Pseudomonas aeruginosa ... [more]
HUTH_PSEA81.130e-2132.68Histidine ammonia-lyase OS=Pseudomonas aeruginosa ... [more]
HUTH_BURVG1.130e-2132.20Histidine ammonia-lyase OS=Burkholderia vietnamien... [more]
HUTH_ACIAC1.130e-2131.78Histidine ammonia-lyase OS=Acidovorax avenae subsp... [more]

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Properties
Property NameValue
Genbank descriptionC32004A10EF DevOvary1 Citrus clementina cDNA clone C32004A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876377 ID=FC876377; Name=FC876377; organism=Citrus clementina; type=EST; length=728bp
GGGATGCGTTGAACTGGGGAGTGATGGCGGAGACGTTGAAGGGGAGCCAT
TTGGAGGAAGTGAAGCGTATGGTGGCGGAGTACAGGAAGCCGGTGGTCAA
CCTCGGTGGTGAGACGTTGACCGTAGCACAGGTGGCTGCCATTGCCACGT
CCTCTACGAATGTGGAGCTGTCGGAATCTGCCAGGGAAGGCGTCAAGGCC
AGCAGTGATTGGGTGATGGAGAGCATGAATAAGGGTACCGACAGTTACGG
CGTTACCACTGGCTTTGGTGCCACTTCTCATCGGAGAACCAAGAACGGCG
GTGCTCTTCAGAAGGAGCTCATTAGATTTTTGAACGCTGGAATCTTTGGA
AACGGAACAGAGTCATCTCACACGCTACCTCACTCAGCAACAAGGGCAGC
CATGCTTGTGAGGGTTAACACTCTTCTCCAGGGCTACTCCGGCATCCGAT
TTGAAATCCTGGAAGCGATCACAAAGCTGCTCAATCACAACATCACTCCA
TGCCTCCCTCTTCGCGGCACAATCACTGCTTCAGGGGATCTGGTTCCTCT
TTCCTACATTGCCGGACTGCTCGCCGGCCGGCCCAATTCTAAGGCCACCG
GGCCTAATGGAGAGATCATTGATGCCCAGGAAGCCTCTAAACAAGCGGGT
TTCGGGTTCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCTCTTTGTCATGG
CACTGCTGTTGGTTCTGGCCTGGCTTCT
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