FC876377

Overview
NameFC876377
Unique NameFC876377
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_STAAM (Histidine ammonia-lyase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=hutH PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.096e-20
Identity = 67/203 (33.00%), Postives = 97/203 (47.78%), Query Frame = 3
Query:  102 LGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK--NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGT 704
            L GETLT+  + +     + +E+ + A E VK S   V   +      YG+TTGFG  S  R        LQ  LIR    G+                   M++R+NTLL+G+SG   E++  +   +N  I P +P +G++ ASGDL PLS++A  L G          GE  D+ +  ++       LQ KEGLAL +GT
Sbjct:    5 LDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGL-------GEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLY---RGEEKDSDDVLRELNRQPLNLQAKEGLALINGT 197          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_STAAE (Histidine ammonia-lyase OS=Staphylococcus aureus (strain Newman) GN=hutH PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.096e-20
Identity = 67/203 (33.00%), Postives = 97/203 (47.78%), Query Frame = 3
Query:  102 LGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK--NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGT 704
            L GETLT+  + +     + +E+ + A E VK S   V   +      YG+TTGFG  S  R        LQ  LIR    G+                   M++R+NTLL+G+SG   E++  +   +N  I P +P +G++ ASGDL PLS++A  L G          GE  D+ +  ++       LQ KEGLAL +GT
Sbjct:    5 LDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGL-------GEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLY---RGEEKDSDDVLRELNRQPLNLQAKEGLALINGT 197          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_STAAC (Histidine ammonia-lyase OS=Staphylococcus aureus (strain COL) GN=hutH PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.096e-20
Identity = 67/203 (33.00%), Postives = 97/203 (47.78%), Query Frame = 3
Query:  102 LGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK--NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGT 704
            L GETLT+  + +     + +E+ + A E VK S   V   +      YG+TTGFG  S  R        LQ  LIR    G+                   M++R+NTLL+G+SG   E++  +   +N  I P +P +G++ ASGDL PLS++A  L G          GE  D+ +  ++       LQ KEGLAL +GT
Sbjct:    5 LDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGL-------GEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLY---RGEEKDSDDVLRELNRQPLNLQAKEGLALINGT 197          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_STAA9 (Histidine ammonia-lyase OS=Staphylococcus aureus (strain JH9) GN=hutH PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.096e-20
Identity = 67/203 (33.00%), Postives = 97/203 (47.78%), Query Frame = 3
Query:  102 LGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK--NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGT 704
            L GETLT+  + +     + +E+ + A E VK S   V   +      YG+TTGFG  S  R        LQ  LIR    G+                   M++R+NTLL+G+SG   E++  +   +N  I P +P +G++ ASGDL PLS++A  L G          GE  D+ +  ++       LQ KEGLAL +GT
Sbjct:    5 LDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGL-------GEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLY---RGEEKDSDDVLRELNRQPLNLQAKEGLALINGT 197          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_STAA8 (Histidine ammonia-lyase OS=Staphylococcus aureus (strain NCTC 8325) GN=hutH PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.096e-20
Identity = 67/203 (33.00%), Postives = 97/203 (47.78%), Query Frame = 3
Query:  102 LGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK--NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGT 704
            L GETLT+  + +     + +E+ + A E VK S   V   +      YG+TTGFG  S  R        LQ  LIR    G+                   M++R+NTLL+G+SG   E++  +   +N  I P +P +G++ ASGDL PLS++A  L G          GE  D+ +  ++       LQ KEGLAL +GT
Sbjct:    5 LDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGL-------GEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLY---RGEEKDSDDVLRELNRQPLNLQAKEGLALINGT 197          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_STAA3 (Histidine ammonia-lyase OS=Staphylococcus aureus (strain USA300) GN=hutH PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.096e-20
Identity = 67/203 (33.00%), Postives = 97/203 (47.78%), Query Frame = 3
Query:  102 LGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK--NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGT 704
            L GETLT+  + +     + +E+ + A E VK S   V   +      YG+TTGFG  S  R        LQ  LIR    G+                   M++R+NTLL+G+SG   E++  +   +N  I P +P +G++ ASGDL PLS++A  L G          GE  D+ +  ++       LQ KEGLAL +GT
Sbjct:    5 LDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGL-------GEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLY---RGEEKDSDDVLRELNRQPLNLQAKEGLALINGT 197          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_STAA2 (Histidine ammonia-lyase OS=Staphylococcus aureus (strain JH1) GN=hutH PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.096e-20
Identity = 67/203 (33.00%), Postives = 97/203 (47.78%), Query Frame = 3
Query:  102 LGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK--NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGT 704
            L GETLT+  + +     + +E+ + A E VK S   V   +      YG+TTGFG  S  R        LQ  LIR    G+                   M++R+NTLL+G+SG   E++  +   +N  I P +P +G++ ASGDL PLS++A  L G          GE  D+ +  ++       LQ KEGLAL +GT
Sbjct:    5 LDGETLTIEDIKSFLQQQSKIEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIRSHACGL-------GEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLY---RGEEKDSDDVLRELNRQPLNLQAKEGLALINGT 197          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_BOVIN (Histidine ammonia-lyase OS=Bos taurus GN=HAL PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.096e-20
Identity = 68/222 (30.63%), Postives = 113/222 (50.90%), Query Frame = 3
Query:   69 MVAEYRKP--VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFG--ATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGL 722
            + ++YR+P   + L G++LT   + ++      ++L+ +A + V+ S + +   + + T  YG+TTGFG  A +         LQ  L+R  ++G+          L     R  + +R+N L +GYSGI    L+ + ++ N +  P +P +GT+ ASGDL PLS++A  L G    K   P     DA+      G     L+PKEGLAL +GT + + L
Sbjct:  103 LYSKYREPEKYIALDGDSLTTEDLVSLGKGHYKIKLTPTAEKRVQKSREVIDRIVEEKTVVYGITTGFGKFARTVIPVSKLEELQFNLVRSHSSGV-------GKPLSPERCRMLLALRINVLAKGYSGISLGTLKQVIEVFNASCLPYVPEKGTVGASGDLAPLSHLALGLIG--EGKMWSPKSGWADAKYVLAAHGLKPIVLKPKEGLALINGTQMITSL 315          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_BACAN (Histidine ammonia-lyase OS=Bacillus anthracis GN=hutH PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.381e-19
Identity = 64/206 (31.07%), Postives = 103/206 (50.00%), Query Frame = 3
Query:   93 VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGG--ALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGT 704
            ++ L G TLT+ ++  +      V    ++ + V    + V + +  G   YG+TTGFG  S    +     ALQ  LI+    GI           P   +R  +++R NT+L+G SG+R  ++  + + +N  I P +P +G++ ASGDL PLS++A +L G          G+ + A  A  + G    EL+ KEGLAL +GT
Sbjct:    1 MITLTGHTLTIEEMKRLLLEGEGVTACPTSMQKVAECREVVEKIVENGKVVYGITTGFGKFSDVLIQKDDVKALQHNLIQSHACGI-------GDPFPEEVSRGMLILRANTMLKGVSGVRPLVVNMLLEFVNRKIHPVVPQQGSLGASGDLAPLSHLALILLGEGE---VFYKGKRVHAMVALTEEGLEPIELEAKEGLALINGT 196          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_BACAC (Histidine ammonia-lyase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=hutH PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.381e-19
Identity = 64/206 (31.07%), Postives = 103/206 (50.00%), Query Frame = 3
Query:   93 VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGG--ALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGT 704
            ++ L G TLT+ ++  +      V    ++ + V    + V + +  G   YG+TTGFG  S    +     ALQ  LI+    GI           P   +R  +++R NT+L+G SG+R  ++  + + +N  I P +P +G++ ASGDL PLS++A +L G          G+ + A  A  + G    EL+ KEGLAL +GT
Sbjct:    1 MITLTGHTLTIEEMKRLLLEGEGVTACPTSMQKVAECREVVEKIVENGKVVYGITTGFGKFSDVLIQKDDVKALQHNLIQSHACGI-------GDPFPEEVSRGMLILRANTMLKGVSGVRPLVVNMLLEFVNRKIHPVVPQQGSLGASGDLAPLSHLALILLGEGE---VFYKGKRVHAMVALTEEGLEPIELEAKEGLALINGT 196          
The following BLAST results are available for this feature:
BLAST of FC876377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
HUTH_STAAM8.096e-2033.00Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_STAAE8.096e-2033.00Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_STAAC8.096e-2033.00Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_STAA98.096e-2033.00Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_STAA88.096e-2033.00Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_STAA38.096e-2033.00Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_STAA28.096e-2033.00Histidine ammonia-lyase OS=Staphylococcus aureus (... [more]
HUTH_BOVIN8.096e-2030.63Histidine ammonia-lyase OS=Bos taurus GN=HAL PE=2 ... [more]
HUTH_BACAN1.381e-1931.07Histidine ammonia-lyase OS=Bacillus anthracis GN=h... [more]
HUTH_BACAC1.381e-1931.07Histidine ammonia-lyase OS=Bacillus anthracis (str... [more]

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Properties
Property NameValue
Genbank descriptionC32004A10EF DevOvary1 Citrus clementina cDNA clone C32004A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876377 ID=FC876377; Name=FC876377; organism=Citrus clementina; type=EST; length=728bp
GGGATGCGTTGAACTGGGGAGTGATGGCGGAGACGTTGAAGGGGAGCCAT
TTGGAGGAAGTGAAGCGTATGGTGGCGGAGTACAGGAAGCCGGTGGTCAA
CCTCGGTGGTGAGACGTTGACCGTAGCACAGGTGGCTGCCATTGCCACGT
CCTCTACGAATGTGGAGCTGTCGGAATCTGCCAGGGAAGGCGTCAAGGCC
AGCAGTGATTGGGTGATGGAGAGCATGAATAAGGGTACCGACAGTTACGG
CGTTACCACTGGCTTTGGTGCCACTTCTCATCGGAGAACCAAGAACGGCG
GTGCTCTTCAGAAGGAGCTCATTAGATTTTTGAACGCTGGAATCTTTGGA
AACGGAACAGAGTCATCTCACACGCTACCTCACTCAGCAACAAGGGCAGC
CATGCTTGTGAGGGTTAACACTCTTCTCCAGGGCTACTCCGGCATCCGAT
TTGAAATCCTGGAAGCGATCACAAAGCTGCTCAATCACAACATCACTCCA
TGCCTCCCTCTTCGCGGCACAATCACTGCTTCAGGGGATCTGGTTCCTCT
TTCCTACATTGCCGGACTGCTCGCCGGCCGGCCCAATTCTAAGGCCACCG
GGCCTAATGGAGAGATCATTGATGCCCAGGAAGCCTCTAAACAAGCGGGT
TTCGGGTTCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCTCTTTGTCATGG
CACTGCTGTTGGTTCTGGCCTGGCTTCT
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