FC876377

Overview
NameFC876377
Unique NameFC876377
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10441 contig Ccv1_Contig10441:221..948. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PALY_CITLI (Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL6 PE=2 SV=1)

HSP 1 Score: 389.037 bits (998), Expect = 1.346e-107
Identity = 199/246 (80.89%), Postives = 216/246 (87.80%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT--SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D LNW V A++LKGSHL+EVKRM+ EYR+PVV LGGE+LT+ QV AIA   S   VEL+E+AR GVKASSDWVM+SM KGTDSYGVTTGFGATSHRRTK GGALQKELIRFLN+GIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILE ITK LNHNITPCLPLRGTITASGDLVPLSYIAGLL GRPNSKA G NG++++  EA   AG   GFFELQPKEGLAL +GTAVGSGLA+
Sbjct:   29 DPLNWTVAADSLKGSHLDEVKRMIDEYRRPVVKLGGESLTIGQVTAIAAHDSGVKVELAEAARAGVKASSDWVMDSMMKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNSGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILETITKFLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGSNGQVLNPTEAFNLAGVTSGFFELQPKEGLALVNGTAVGSGLAA 274          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL3_PETCR (Phenylalanine ammonia-lyase 3 OS=Petroselinum crispum GN=PAL3 PE=2 SV=1)

HSP 1 Score: 386.726 bits (992), Expect = 6.681e-107
Identity = 202/248 (81.45%), Postives = 216/248 (87.10%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT---SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTES-SHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D LNWGV AE L GSHL+EVKRMVAEYRKPVV L GETLT++QVAAI+    S   VELSE AR GVKASSDWVM+SMNKGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFG+G E+ ++TLPHSATRAAMLVR+NTLLQGYSGIRFEILEAITK LNHNITPCLPLRGTITASGDLVPLSYIAGLL GRPNSKA GP G  +  +EA K AG   GFFELQPKEGLAL +GTAVGSG+AS
Sbjct:   25 DPLNWGVAAEALTGSHLDEVKRMVAEYRKPVVKLEGETLTISQVAAISARDDSGVKVELSEEARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGSGAEAGNNTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPTGVTLSPEEAFKLAGVEGGFFELQPKEGLALVNGTAVGSGMAS 272          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL2_PHAVU (Phenylalanine ammonia-lyase class 2 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 8.726e-107
Identity = 201/246 (81.71%), Postives = 216/246 (87.80%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT--SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFG--FFELQPKEGLALCHGTAVGSGLAS 728
            D LNW   AE L GSHL+EVKRMVAEYRKP V LGG+TLT+AQVAA A       VEL+ESAR  VKA SDWVMESM+KGTDSYG+TTGFGATSHRRTK GGALQKELIRFLNAGIFGNGTES+ TLPH+ATRAAMLVRVNTLLQGYSGIRFEILEAITKLLN+NITPCLPLRGTITASGDLVPLSYIAGLL GRPNSKA GP+GEI++A+EA + A  G  FFELQPKEGLAL +GTAVGSGLAS
Sbjct:   21 DPLNWAAAAEALSGSHLDEVKRMVAEYRKPAVRLGGQTLTIAQVAATAAHDQGLKVELAESARACVKAISDWVMESMDKGTDSYGITTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGTESNCTLPHTATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEILNAKEAFELANIGSEFFELQPKEGLALVNGTAVGSGLAS 266          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL1_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL PE=2 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 8.726e-107
Identity = 198/249 (79.52%), Postives = 220/249 (88.35%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIA-----TSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D LNW + A++L+GSHL+EVK+MV E+RKP+V LGGETL+VAQVA+IA     ++   VELSESAR GVKASSDWVM+SM+KGTDSYGVT GFGATSHRRTKNGGALQKELIRFLNAG+FGNG ES HTLPHSATRAAMLVR+NTLLQGYSGIRFEILEAITKL+N NITPCLPLRGTITASGDLVPLSYIAGLL GRPNSKA GPNGE ++A+EA   AG   GFFELQPKEGLAL +GTAVGS +AS
Sbjct:   10 DPLNWEMAADSLRGSHLDEVKKMVDEFRKPIVKLGGETLSVAQVASIANVDDKSNGVKVELSESARAGVKASSDWVMDSMSKGTDSYGVTAGFGATSHRRTKNGGALQKELIRFLNAGVFGNGIESFHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLINSNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPNGEKLNAEEAFCVAGISGGFFELQPKEGLALVNGTAVGSAMAS 258          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL2_ARATH (Phenylalanine ammonia-lyase 2 OS=Arabidopsis thaliana GN=PAL2 PE=1 SV=2)

HSP 1 Score: 385.956 bits (990), Expect = 1.140e-106
Identity = 198/246 (80.49%), Postives = 219/246 (89.02%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT--SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D LNWG+ A+ +KGSHL+EVK+MV EYR+PVVNLGGETLT+ QVAAI+T   S  VEL+E++R GVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNG ALQ ELIRFLNAGIFGN  E+ HTLP SATRAAMLVRVNTLLQGYSGIRFEILEAIT LLNHNI+P LPLRGTITASGDLVPLSYIAGLL GRPNSKATGP+GE + A+EA ++AG   GFF+LQPKEGLAL +GTAVGSG+AS
Sbjct:   26 DPLNWGLAADQMKGSHLDEVKKMVEEYRRPVVNLGGETLTIGQVAAISTVGGSVKVELAETSRAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGTALQTELIRFLNAGIFGNTKETCHTLPQSATRAAMLVRVNTLLQGYSGIRFEILEAITSLLNHNISPSLPLRGTITASGDLVPLSYIAGLLTGRPNSKATGPDGESLTAKEAFEKAGISTGFFDLQPKEGLALVNGTAVGSGMAS 271          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL2_CICAR (Phenylalanine ammonia-lyase 2 OS=Cicer arietinum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 3.316e-106
Identity = 193/246 (78.46%), Postives = 220/246 (89.43%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSSTNV--ELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D+LNWG+ A++++GSHL+EVKRMV EYRK VV LGG+ LT++QVAA+AT +T V  EL+E  R  VKASSDWV++SMNKGTDSYGVTTGFGATSHRRTK GGALQ ELIRFLNAGIFGNGTES+ TLPH+ATRAAMLVR+NTLLQGYSGIRFEI+EAI K LNHNITPCLPLRGTITASGDLVPLSY+AGLL GRPNSK+ GPNG+I++A+EA + AG   GFFELQPKEGLAL +GTAVGSGLAS
Sbjct:   27 DSLNWGMAADSMRGSHLDEVKRMVEEYRKAVVPLGGKGLTISQVAAVATQNTGVAVELAEETRYAVKASSDWVVDSMNKGTDSYGVTTGFGATSHRRTKQGGALQNELIRFLNAGIFGNGTESTQTLPHTATRAAMLVRINTLLQGYSGIRFEIMEAIAKFLNHNITPCLPLRGTITASGDLVPLSYVAGLLIGRPNSKSIGPNGQILNAKEAFQLAGIETGFFELQPKEGLALVNGTAVGSGLAS 272          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL1_SOLTU (Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum GN=PAL-1 PE=3 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 3.316e-106
Identity = 197/249 (79.12%), Postives = 219/249 (87.95%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIA-----TSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D LNW +  ++L+GSHL+EVK+MV E+RKP+V L GETLTVAQVA+IA     TS   VELSESAR GVKASSDWVM+SM+KGTDSYGVTTGF ATSHRRTKNGGALQKELI+FLNAG+FGNGTES+HTLPHSATRAAMLVR+NTLLQGYSGIRFEILEAITKL+N NITPCLPLRGT+TASGDLVPLSYIAGLL GRPNSKA GP+G  +DA EA + A    GFFELQPKEGLAL +GTAVGSG+AS
Sbjct:   26 DPLNWEMAVDSLRGSHLDEVKKMVDEFRKPIVKLWGETLTVAQVASIANADNKTSGFKVELSESARAGVKASSDWVMDSMSKGTDSYGVTTGFCATSHRRTKNGGALQKELIKFLNAGVFGNGTESTHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLINSNITPCLPLRGTVTASGDLVPLSYIAGLLTGRPNSKAVGPSGSKLDADEAFRVAAVSGGFFELQPKEGLALVNGTAVGSGMAS 274          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL2_PETCR (Phenylalanine ammonia-lyase 2 OS=Petroselinum crispum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 4.330e-106
Identity = 200/247 (80.97%), Postives = 215/247 (87.04%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT---SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D L WG+ AE + GSHL+EVK+MVAEYRKPVV LGGETLT++QVAAI+    S   VELSE+AR GVKASSDWVM+SMNKGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFGNG  S +TLPHSATRAAMLVR+NTLLQGYSGIRFEILEAITK LN NITPCLPLRGTITASGDLVPLSYIAGLL GRPNSKA GP G I+  +EA K AG   GFFELQPKEGLAL +GTAVGSG+AS
Sbjct:   26 DPLYWGIAAEAMTGSHLDEVKKMVAEYRKPVVKLGGETLTISQVAAISARDGSGVTVELSEAARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNG--SDNTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNQNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPTGVILSPEEAFKLAGVEGGFFELQPKEGLALVNGTAVGSGMAS 270          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL1_PETCR (Phenylalanine ammonia-lyase 1 OS=Petroselinum crispum GN=PAL1 PE=1 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 4.330e-106
Identity = 200/247 (80.97%), Postives = 215/247 (87.04%), Query Frame = 3
Query:    3 DALNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIAT---SSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            D L WG+ AE + GSHL+EVK+MVAEYRKPVV LGGETLT++QVAAI+    S   VELSE+AR GVKASSDWVM+SMNKGTDSYGVTTGFGATSHRRTK GGALQKELIRFLNAGIFGNG  S +TLPHSATRAAMLVR+NTLLQGYSGIRFEILEAITK LN NITPCLPLRGTITASGDLVPLSYIAGLL GRPNSKA GP G I+  +EA K AG   GFFELQPKEGLAL +GTAVGSG+AS
Sbjct:   26 DPLYWGIAAEAMTGSHLDEVKKMVAEYRKPVVKLGGETLTISQVAAISARDGSGVTVELSEAARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNG--SDNTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNQNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPTGVILSPEEAFKLAGVEGGFFELQPKEGLALVNGTAVGSGMAS 270          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: PAL2_SOLTU (Phenylalanine ammonia-lyase 2 (Fragment) OS=Solanum tuberosum GN=PAL-2 PE=3 SV=1)

HSP 1 Score: 377.096 bits (967), Expect = 5.294e-104
Identity = 192/247 (77.73%), Postives = 217/247 (87.85%), Query Frame = 3
Query:    9 LNWGVMAETLKGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIA-----TSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF--GFFELQPKEGLALCHGTAVGSGLAS 728
            LNW + A++L+GS L++VK+MV E+RKP+V LGGETLTVAQVA+IA     ++   VELSESAR GVKASSDWVM+SM+KGTDSYGVTTGFGATSHRRTKNGG LQK LIRFLNAG+FG GTES+HTLPHSATRAAMLVR+NTLLQGYSGIRFEILEAITKL+N NI+PCLPLRGT+TASGDLVPLSYIAGLL GRPNSKA GP G  +DA+EA + AG   GFFELQPKEGLAL +GTAVGS +AS
Sbjct:   31 LNWEMAADSLRGSKLDQVKKMVDEFRKPIVKLGGETLTVAQVASIANVDNKSNGVRVELSESARAGVKASSDWVMDSMSKGTDSYGVTTGFGATSHRRTKNGGTLQKNLIRFLNAGVFGIGTESTHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLINSNISPCLPLRGTVTASGDLVPLSYIAGLLTGRPNSKAVGPTGSKLDAEEAFRVAGVTGGFFELQPKEGLALVNGTAVGSAMAS 277          
The following BLAST results are available for this feature:
BLAST of FC876377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
PALY_CITLI1.346e-10780.89Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL... [more]
PAL3_PETCR6.681e-10781.45Phenylalanine ammonia-lyase 3 OS=Petroselinum cris... [more]
PAL2_PHAVU8.726e-10781.71Phenylalanine ammonia-lyase class 2 OS=Phaseolus v... [more]
PAL1_SOLLC8.726e-10779.52Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]
PAL2_ARATH1.140e-10680.49Phenylalanine ammonia-lyase 2 OS=Arabidopsis thali... [more]
PAL2_CICAR3.316e-10678.46Phenylalanine ammonia-lyase 2 OS=Cicer arietinum G... [more]
PAL1_SOLTU3.316e-10679.12Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... [more]
PAL2_PETCR4.330e-10680.97Phenylalanine ammonia-lyase 2 OS=Petroselinum cris... [more]
PAL1_PETCR4.330e-10680.97Phenylalanine ammonia-lyase 1 OS=Petroselinum cris... [more]
PAL2_SOLTU5.294e-10477.73Phenylalanine ammonia-lyase 2 (Fragment) OS=Solanu... [more]

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Properties
Property NameValue
Genbank descriptionC32004A10EF DevOvary1 Citrus clementina cDNA clone C32004A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876377 ID=FC876377; Name=FC876377; organism=Citrus clementina; type=EST; length=728bp
GGGATGCGTTGAACTGGGGAGTGATGGCGGAGACGTTGAAGGGGAGCCAT
TTGGAGGAAGTGAAGCGTATGGTGGCGGAGTACAGGAAGCCGGTGGTCAA
CCTCGGTGGTGAGACGTTGACCGTAGCACAGGTGGCTGCCATTGCCACGT
CCTCTACGAATGTGGAGCTGTCGGAATCTGCCAGGGAAGGCGTCAAGGCC
AGCAGTGATTGGGTGATGGAGAGCATGAATAAGGGTACCGACAGTTACGG
CGTTACCACTGGCTTTGGTGCCACTTCTCATCGGAGAACCAAGAACGGCG
GTGCTCTTCAGAAGGAGCTCATTAGATTTTTGAACGCTGGAATCTTTGGA
AACGGAACAGAGTCATCTCACACGCTACCTCACTCAGCAACAAGGGCAGC
CATGCTTGTGAGGGTTAACACTCTTCTCCAGGGCTACTCCGGCATCCGAT
TTGAAATCCTGGAAGCGATCACAAAGCTGCTCAATCACAACATCACTCCA
TGCCTCCCTCTTCGCGGCACAATCACTGCTTCAGGGGATCTGGTTCCTCT
TTCCTACATTGCCGGACTGCTCGCCGGCCGGCCCAATTCTAAGGCCACCG
GGCCTAATGGAGAGATCATTGATGCCCAGGAAGCCTCTAAACAAGCGGGT
TTCGGGTTCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCTCTTTGTCATGG
CACTGCTGTTGGTTCTGGCCTGGCTTCT
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