FC876377

Overview
NameFC876377
Unique NameFC876377
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_BRUO2 (Histidine ammonia-lyase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=hutH PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.638e-14
Identity = 54/190 (28.42%), Postives = 90/190 (47.37%), Query Frame = 3
Query:  162 VELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNG--GALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            V +  +   G++ ++  + E        YG+ TGFG  +  R   G    LQ+ LI     G+          L  +  R  M +++ +L +G SG+R E++  I  +L   + P +P +G++ ASGDL PL+++   + G   +      GE +   +A  +AG     L  KEGLAL +GT   + LA
Sbjct:   25 VRIDPAFHAGIEKAAARIAEIAAGDAPVYGINTGFGKLASIRIAAGDVATLQRNLILPHCCGV-------GEPLSENIVRLIMALKLVSLGRGASGVRLEVITLIEAMLEKGVIPMIPEKGSVGASGDLAPLAHMTAAMIGEGEAFY---RGERLSGAKALGKAGLKPVVLAAKEGLALINGTQTSTALA 204          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_BRASO (Histidine ammonia-lyase OS=Bradyrhizobium sp. (strain ORS278) GN=hutH PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.670e-14
Identity = 52/180 (28.89%), Postives = 90/180 (50.00%), Query Frame = 3
Query:  192 VKASSDWVMESMNKGTDSYGVTTGFGATSHRRTK--NGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            V+A++  V ++       YG+ TGFG  + +R        LQ+ LI     G+ G  T      P    R  + +++ +L +G SG+R +I++ +  +L   + P +P +G++ ASGDL PL+++  ++ G   +      G ++  +EA    G     L PKEGLAL +GT   +  A
Sbjct:   35 VEAAAAIVAKAAQGAEPVYGINTGFGKLASKRIPPDQTALLQRNLILSHCCGV-GPAT------PEPIVRLMIALKIISLGRGASGVRRQIVDQLQAMLAQGVCPFVPQQGSVGASGDLAPLAHMTAVMIGEGQAFV---EGRLVPGREALAHVGLDPVTLGPKEGLALINGTQFSTAYA 204          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTIH_BRUME (Bifunctional imidazolonepropionase/histidine ammonia-lyase OS=Brucella melitensis GN=hutIH PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13
Identity = 53/190 (27.89%), Postives = 90/190 (47.37%), Query Frame = 3
Query:  162 VELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNG--GALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            V +  +   G++ ++  + E        YG+ TGFG  +  R   G    LQ+ LI     G+          L  +  R  M +++ +L +G SG++ E++  I  +L   + P +P +G++ ASGDL PL+++   + G   +      GE +   +A  +AG     L  KEGLAL +GT   + LA
Sbjct:  439 VRIDPAFHAGIEKAAARIAEIAAGDAPVYGINTGFGKLASIRIAAGDVATLQRNLILSHCCGV-------GEPLSENIVRLIMALKLVSLGRGASGVQLEVITLIEAMLEKGVIPMIPEKGSVGASGDLAPLAHMTAAMIGEGEAFY---RGERLSGAKALGKAGLKPVVLAAKEGLALINGTQTSTALA 618          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_BARHE (Histidine ammonia-lyase OS=Bartonella henselae GN=hutH PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 55/205 (26.83%), Postives = 100/205 (48.78%), Query Frame = 3
Query:  117 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRR--TKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            +T++Q+ A+  +    +L       +K  ++ + +        YG+ TGFG  +  +    N   LQ+ LI     G+          L  +  R  M +++ +L +G SG+R E+++ +  +L + + P +P +G++ ASGDL PL+++A ++ G   +         I A E   +AG     L+ KEGLAL +GT   + LA
Sbjct:   10 VTLSQLEAVYWNGEVSKLHHDTHFAIKKGAERIAKIAAGSEPVYGINTGFGKLASIKIDADNVVVLQRNLILSHCCGV-------GVPLAENIVRLMMTLKLISLGRGASGVRLELVQLLENMLANGVIPVIPEKGSVGASGDLAPLAHMAAVMMGEGEAFFQNIRMSGIAALE---KAGLCPITLEAKEGLALINGTQTSTALA 204          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_AGRRH (Histidine ammonia-lyase OS=Agrobacterium rhizogenes GN=hutH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13
Identity = 55/200 (27.50%), Postives = 95/200 (47.50%), Query Frame = 3
Query:  132 VAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNG--GALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            +A I  ++ + +L  S    V   +  + E        YG+ TGFG  +  +        LQ+ LI     G+          LP +  R  M +++ +L +G SG+R E++  I  +L   + P +P +G++ ASGDL PL++++  + G   +   G     + +++A  +AG     L  KEGLAL +GT   + LA
Sbjct:   15 LADIYWNNGSAKLDPSFDAAVLKGAARIAEIAAGNAPVYGINTGFGKLASIKIDAADLATLQRNLILSHCCGV-------GAPLPENVVRLIMALKLISLGRGASGVRIELIRLIEGMLEKGVIPVIPEKGSVGASGDLAPLAHMSATMMGEGEAFYQGVQ---MPSKDALAKAGLSPVVLAAKEGLALINGTQTSTALA 204          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_HYPNA (Histidine ammonia-lyase OS=Hyphomonas neptunium (strain ATCC 15444) GN=hutH PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13
Identity = 54/190 (28.42%), Postives = 94/190 (49.47%), Query Frame = 3
Query:  165 ELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGA--LQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGF-GFFELQPKEGLALCHGTAVGSGLA 725
            +L  + R  +  S+  V   +++G   YG+ TGFG  +  R  +     LQ+ ++    AG+           P +  R  M +++  L +G SG+R E ++ +  +L  ++ P +P +G++ ASGDL PL+++A  + G  +       GE + A  A ++AG      L  KEGLAL +GT   +  A
Sbjct:   26 KLDPACRPTIAGSASAVARILSRGKPVYGINTGFGKLAAVRIPDDQLEMLQRNIVLSHAAGV-------GEPSPANIVRLMMALKMTNLGRGASGVRLETIDLMEAMLAADLLPLIPAQGSVGASGDLAPLAHMACAMIGVGD---VFLKGERLSAASAFRKAGLTPLPALAAKEGLALLNGTQFSTACA 205          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_CAEEL (Probable histidine ammonia-lyase OS=Caenorhabditis elegans GN=F47B10.2 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13
Identity = 66/233 (28.33%), Postives = 108/233 (46.35%), Query Frame = 3
Query:   39 KGSHLEEVKRMVAEYRKPVVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLV--RVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIA-GLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLAS 728
            K S  + +  MV      ++ L G +L    +         ++LS  + + ++ +  ++ +  ++    YGVTTGFG  S+  T     L+K  +  + +   G G       P +  RA ML+  R+N L +G+SGI  E ++ +    N      +P +GT+  SGDL PL+++A GLL      K   P      A    K+      EL PKEGLAL +GT + + L +
Sbjct:  111 KVSFADSLAPMVLAPPTKLLILDGNSLLPEDLVRCEKGECAIQLSMESEDRIRKARTFLEKIASEHRAVYGVTTGFGTFSNV-TIPPEKLKKLQLNLIRSHATGYGE------PLAPNRARMLLALRINILAKGHSGISVENIKKMIAAFNAFCVSYVPQQGTVGCSGDLCPLAHLALGLLG---EGKMWSPTTGWQPADVVLKKNNLEPLELGPKEGLALINGTQMVTALGA 333          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_AGRVS (Histidine ammonia-lyase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=hutH PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.339e-13
Identity = 56/212 (26.42%), Postives = 100/212 (47.17%), Query Frame = 3
Query:   96 VNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRR--TKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            + L   ++ +A +A I        L  S   G++ ++  +          YGV TGFG  +  +    +   LQ+ LI     G+          L  +  R  + +++ +L +G SG+R +++  I  +L   + P +P +G++ ASGDL PL+++A ++ G   +      GE +  + A ++AG     L  KEGLAL +GT   + LA
Sbjct:    3 ITLHPGSVPLADLAKIYWHGEPAVLDRSFDAGIERAAARIAAIAAGNEPVYGVNTGFGKLASIKIDAADTATLQRNLILSHCCGV-------GAPLAENIVRLILSLKLISLGRGASGVRLDLVRLIEAMLEKGVIPLIPEKGSVGASGDLAPLAHMAAVMMGEAEAFY---QGEKLPGRIALERAGLTPVILAAKEGLALINGTQASTALA 204          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_BART1 (Histidine ammonia-lyase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=hutH PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.635e-12
Identity = 55/205 (26.83%), Postives = 100/205 (48.78%), Query Frame = 3
Query:  117 LTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRR--TKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            +T++++ AI  +    +L       ++  +  + E +      YG+ TGFG  +  +        LQ+ LI     G+          L  +  R  M +++ +L +G SG+R E++  +  +L   + P +P +G++ ASGDL PL+++A ++ G    +A   N  +  A  A ++AG     L+ KEGLAL +GT   + LA
Sbjct:   10 VTLSELEAIYFNGEISKLHHDTHLVIERGAQRIAEIVAGSEPVYGINTGFGKLASIKIDADKVTVLQRNLILSHCCGV-------GDPLAENIVRLIMSLKLISLGRGASGVRLELVNLLENMLEKGVIPVIPEKGSVGASGDLAPLAHMAAVMMG--EGEAFFQNIRMSGAL-ALEKAGLSPIILEAKEGLALINGTQTSTALA 204          
BLAST of FC876377 vs. ExPASy Swiss-Prot
Match: HUTH_BARQU (Histidine ammonia-lyase OS=Bartonella quintana GN=hutH PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.757e-12
Identity = 58/213 (27.23%), Postives = 98/213 (46.01%), Query Frame = 3
Query:   93 VVNLGGETLTVAQVAAIATSSTNVELSESAREGVKASSDWVMESMNKGTDSYGVTTGFGATSHRR--TKNGGALQKELIRFLNAGIFGNGTESSHTLPHSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLAGRPNSKATGPNGEIIDAQEASKQAGFGFFELQPKEGLALCHGTAVGSGLA 725
            V+N G  TL   Q+ AI  +    +L       ++  +D + E        YG+ TGFG  +  +    +   LQ+ LI         +       L  +  R  M +++ +L +G SG+R E++  +  +L   + P +P +G++ ASGDL PL+++  ++ G    +A   N  +  A    K   F    L+ KEGLAL +GT   + LA
Sbjct:    4 VLNPGKVTLN--QLEAIYWNGEVSKLHNDTHLAIRKGADRIAEIAAGSQPVYGINTGFGKLASIKIDANDVAVLQRNLI-------LSHCCAVGAPLAENIVRLMMTLKLISLGRGASGVRLELVHLLESMLAKGVIPVIPEKGSVGASGDLAPLAHMVAVMIG--EGEAFFQNIRMSGAAALEKARLFP-ITLEAKEGLALINGTQTSTALA 204          
The following BLAST results are available for this feature:
BLAST of FC876377 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
HUTH_BRUO26.638e-1428.42Histidine ammonia-lyase OS=Brucella ovis (strain A... [more]
HUTH_BRASO8.670e-1428.89Histidine ammonia-lyase OS=Bradyrhizobium sp. (str... [more]
HUTIH_BRUME1.132e-1327.89Bifunctional imidazolonepropionase/histidine ammon... [more]
HUTH_BARHE1.479e-1326.83Histidine ammonia-lyase OS=Bartonella henselae GN=... [more]
HUTH_AGRRH1.931e-1327.50Histidine ammonia-lyase OS=Agrobacterium rhizogene... [more]
HUTH_HYPNA3.295e-1328.42Histidine ammonia-lyase OS=Hyphomonas neptunium (s... [more]
HUTH_CAEEL4.303e-1328.33Probable histidine ammonia-lyase OS=Caenorhabditis... [more]
HUTH_AGRVS7.339e-1326.42Histidine ammonia-lyase OS=Agrobacterium vitis (st... [more]
HUTH_BART11.635e-1226.83Histidine ammonia-lyase OS=Bartonella tribocorum (... [more]
HUTH_BARQU4.757e-1227.23Histidine ammonia-lyase OS=Bartonella quintana GN=... [more]

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Properties
Property NameValue
Genbank descriptionC32004A10EF DevOvary1 Citrus clementina cDNA clone C32004A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876377 ID=FC876377; Name=FC876377; organism=Citrus clementina; type=EST; length=728bp
GGGATGCGTTGAACTGGGGAGTGATGGCGGAGACGTTGAAGGGGAGCCAT
TTGGAGGAAGTGAAGCGTATGGTGGCGGAGTACAGGAAGCCGGTGGTCAA
CCTCGGTGGTGAGACGTTGACCGTAGCACAGGTGGCTGCCATTGCCACGT
CCTCTACGAATGTGGAGCTGTCGGAATCTGCCAGGGAAGGCGTCAAGGCC
AGCAGTGATTGGGTGATGGAGAGCATGAATAAGGGTACCGACAGTTACGG
CGTTACCACTGGCTTTGGTGCCACTTCTCATCGGAGAACCAAGAACGGCG
GTGCTCTTCAGAAGGAGCTCATTAGATTTTTGAACGCTGGAATCTTTGGA
AACGGAACAGAGTCATCTCACACGCTACCTCACTCAGCAACAAGGGCAGC
CATGCTTGTGAGGGTTAACACTCTTCTCCAGGGCTACTCCGGCATCCGAT
TTGAAATCCTGGAAGCGATCACAAAGCTGCTCAATCACAACATCACTCCA
TGCCTCCCTCTTCGCGGCACAATCACTGCTTCAGGGGATCTGGTTCCTCT
TTCCTACATTGCCGGACTGCTCGCCGGCCGGCCCAATTCTAAGGCCACCG
GGCCTAATGGAGAGATCATTGATGCCCAGGAAGCCTCTAAACAAGCGGGT
TTCGGGTTCTTTGAGTTGCAGCCTAAGGAGGGTCTTGCTCTTTGTCATGG
CACTGCTGTTGGTTCTGGCCTGGCTTCT
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