FC876383

Overview
NameFC876383
Unique NameFC876383
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length467
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_TREPA (Chaperone protein htpG OS=Treponema pallidum GN=htpG PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.164e-21
Identity = 54/103 (52.43%), Postives = 72/103 (69.90%), Query Frame = 3
Query:  138 FAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 446
            + FQ E++QLL+LII++ YS+KEIFLRELISN+SDAL K+++E+L D +      E  I I  ++    L + D+GIGM   DL  NLGTIARSGTK F+  L
Sbjct:    4 YEFQTEVSQLLTLIIHSLYSHKEIFLRELISNASDALDKLKYEALVDGTYKQLHCEARIDIAFEEDAQRLVVRDTGIGMNAEDLRANLGTIARSGTKAFLSTL 106          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_MYCPA (Chaperone protein htpG OS=Mycobacterium paratuberculosis GN=htpG PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.164e-21
Identity = 54/110 (49.09%), Postives = 75/110 (68.18%), Query Frame = 3
Query:  117 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 446
            M +  E   FQAE  QLL L++++ YSNK+ FLRELISN+SDAL K+R E+  +K       +L I I  DK   TL+I D+GIGMT+A++V+ +GT+A+SGT E  + L
Sbjct:    1 MNARVEQLEFQAEARQLLDLMVHSVYSNKDSFLRELISNASDALDKLRLEAFRNKDLDVDTSDLHIQIEVDKDARTLTIRDNGIGMTRAEVVDLIGTLAKSGTAELRQQL 110          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_MYCA1 (Chaperone protein htpG OS=Mycobacterium avium (strain 104) GN=htpG PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.164e-21
Identity = 54/110 (49.09%), Postives = 75/110 (68.18%), Query Frame = 3
Query:  117 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEAL 446
            M +  E   FQAE  QLL L++++ YSNK+ FLRELISN+SDAL K+R E+  +K       +L I I  DK   TL+I D+GIGMT+A++V+ +GT+A+SGT E  + L
Sbjct:    1 MNARVEQLEFQAEARQLLDLMVHSVYSNKDSFLRELISNASDALDKLRLEAFRNKDLDVDTSDLHIQIEVDKDARTLTIRDNGIGMTRAEVVDLIGTLAKSGTAELRQQL 110          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: TRAP1_BOVIN (Heat shock protein 75 kDa, mitochondrial OS=Bos taurus GN=TRAP1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.827e-21
Identity = 50/106 (47.17%), Postives = 77/106 (72.64%), Query Frame = 3
Query:  144 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALAAGAD 461
            FQAE  +LL ++  + YS KE+F+RELISN+SDAL K+R + +++   L   P++ IH+  D    T++I D+G+GM++ +LV+NLGTIARSG+K F++AL   A+
Sbjct:   89 FQAETKKLLDIVARSLYSEKEVFIRELISNASDALEKLRHKLVSEGQAL---PDMEIHLQTDADRGTITIQDTGVGMSREELVSNLGTIARSGSKAFLDALQNQAE 191          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_RICM5 (Chaperone protein htpG OS=Rickettsia massiliae (strain Mtu5) GN=htpG PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.827e-21
Identity = 52/111 (46.85%), Postives = 74/111 (66.67%), Query Frame = 3
Query:  117 MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            M    E   F AE+ ++L+L+I++ YSNKEIF+RELISN+SDA  K+R+ S ++   +       I +  DK N  + I D+GIGM K DL+ NLGTIARSGT  F+++L+
Sbjct:    1 MIMTQEKKKFDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSNSELVAGDSNFKITVKVDKDNGQIIIRDNGIGMNKDDLIENLGTIARSGTANFLKSLS 111          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_RICTY (Chaperone protein htpG OS=Rickettsia typhi GN=htpG PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 3.692e-21
Identity = 50/102 (49.02%), Postives = 71/102 (69.61%), Query Frame = 3
Query:  144 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            F AE+ ++L+L+I++ YSNKEIF+RELISN+SDA  K+R+ S ++   +       I +  DK N  + I D+GIGM K DL+ NLGTIARSGT  F++ L+
Sbjct:    8 FDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSNSELISGDSNFKIIVKVDKDNEQIIIRDNGIGMNKEDLIENLGTIARSGTANFLKNLS 109          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_RICRS (Chaperone protein htpG OS=Rickettsia rickettsii (strain Sheila Smith) GN=htpG PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 3.692e-21
Identity = 50/102 (49.02%), Postives = 72/102 (70.59%), Query Frame = 3
Query:  144 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            F AE+ ++L+L+I++ YSNKEIF+RELISN+SDA  K+R+ S ++   +       I +  DK N  + I D+GIGM K DL+ NLGTIARSGT  F+++L+
Sbjct:    8 FDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSNSELVAGDSNFKITVKVDKDNGQIIIRDNGIGMNKDDLIENLGTIARSGTANFLKSLS 109          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_RICRO (Chaperone protein htpG OS=Rickettsia rickettsii (strain Iowa) GN=htpG PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 3.692e-21
Identity = 50/102 (49.02%), Postives = 72/102 (70.59%), Query Frame = 3
Query:  144 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            F AE+ ++L+L+I++ YSNKEIF+RELISN+SDA  K+R+ S ++   +       I +  DK N  + I D+GIGM K DL+ NLGTIARSGT  F+++L+
Sbjct:    8 FDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSNSELVAGDSNFKITVKVDKDNGQIIIRDNGIGMNKDDLIENLGTIARSGTANFLKSLS 109          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_RICCK (Chaperone protein htpG OS=Rickettsia canadensis (strain McKiel) GN=htpG PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 4.822e-21
Identity = 50/102 (49.02%), Postives = 72/102 (70.59%), Query Frame = 3
Query:  144 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            F AE+ ++L+L+I++ YSNKEIF+RELISN+SDA  K+R+ S ++ + +       I +  DK N  + I D+GIGM K DL+ NLGTIARSGT  F++ L+
Sbjct:    8 FDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSNNTLVAGDSNFKITVKIDKNNGQIIIRDNGIGMNKEDLIENLGTIARSGTANFLKNLS 109          
BLAST of FC876383 vs. ExPASy Swiss-Prot
Match: HTPG_RICPR (Chaperone protein htpG OS=Rickettsia prowazekii GN=htpG PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 6.297e-21
Identity = 50/102 (49.02%), Postives = 71/102 (69.61%), Query Frame = 3
Query:  144 FQAEINQLLSLIINTFYSNKEIFLRELISNSSDALGKIRFESLTDKSKLDAQPELFIHIIPDKTNNTLSIIDSGIGMTKADLVNNLGTIARSGTKEFMEALA 449
            F AE+ ++L+L+I++ YSNKEIF+RELISN+SDA  K+R+ S ++   +       I +  DK N  + I D+GIGM K DL+ NLGTIARSGT  F++ L+
Sbjct:    8 FDAEVGKILNLMIHSLYSNKEIFMRELISNASDACDKLRYLSQSNSELIAGDSNFKIIVKVDKDNGQIIIRDNGIGMNKEDLIENLGTIARSGTANFLKNLS 109          
The following BLAST results are available for this feature:
BLAST of FC876383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 375
Match NameE-valueIdentityDescription
HTPG_TREPA2.164e-2152.43Chaperone protein htpG OS=Treponema pallidum GN=ht... [more]
HTPG_MYCPA2.164e-2149.09Chaperone protein htpG OS=Mycobacterium paratuberc... [more]
HTPG_MYCA12.164e-2149.09Chaperone protein htpG OS=Mycobacterium avium (str... [more]
TRAP1_BOVIN2.827e-2147.17Heat shock protein 75 kDa, mitochondrial OS=Bos ta... [more]
HTPG_RICM52.827e-2146.85Chaperone protein htpG OS=Rickettsia massiliae (st... [more]
HTPG_RICTY3.692e-2149.02Chaperone protein htpG OS=Rickettsia typhi GN=htpG... [more]
HTPG_RICRS3.692e-2149.02Chaperone protein htpG OS=Rickettsia rickettsii (s... [more]
HTPG_RICRO3.692e-2149.02Chaperone protein htpG OS=Rickettsia rickettsii (s... [more]
HTPG_RICCK4.822e-2149.02Chaperone protein htpG OS=Rickettsia canadensis (s... [more]
HTPG_RICPR6.297e-2149.02Chaperone protein htpG OS=Rickettsia prowazekii GN... [more]

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Properties
Property NameValue
Genbank descriptionC32004B04EF DevOvary1 Citrus clementina cDNA clone C32004B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876383 ID=FC876383; Name=FC876383; organism=Citrus clementina; type=EST; length=467bp
GGAAACTAACTCTCTGCGTTTTTTCTCTCTCTCTCTCTCTGTCTCTCGTT
CGCTTCCAAACCCCTAGTTTATAATTCAGAAGAGATCGTTTTTTGGTTGA
ACGGCAGGTCGTTTCGATGGCATCAGAGACAGAGACGTTTGCCTTTCAGG
CTGAGATCAACCAGTTGTTGAGTTTGATCATCAACACCTTTTACAGCAAC
AAGGAGATCTTTCTTCGTGAGCTCATCAGCAACTCCTCCGATGCATTGGG
TAAGATCAGATTTGAAAGCTTGACAGACAAGAGCAAGCTAGATGCCCAAC
CAGAGCTTTTCATCCACATTATCCCTGATAAGACCAACAACACTTTGTCT
ATTATTGACAGTGGTATTGGCATGACTAAGGCTGATTTGGTGAACAACCT
TGGTACAATTGCTAGGTCTGGGACCAAAGAGTTCATGGAGGCATTGGCTG
CTGGGGCGGATGTGAGC
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