FC876386
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL3_DICDI (60S ribosomal protein L3 OS=Dictyostelium discoideum GN=rpl3 PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 2.363e-25 Identity = 56/81 (69.14%), Postives = 65/81 (80.25%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETP 245 SHRKFE PRHG+LGF PRKRAAR VK+FPKDD ++ LTAF+GYKAGMTH+VRD+ KP S +HKK+ EAVTIIE P Sbjct: 2 SHRKFEAPRHGNLGFRPRKRAARHQGKVKSFPKDDRTQKVHLTAFMGYKAGMTHVVRDLEKPGSKMHKKEIVEAVTIIECP 82
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL3_ASPFU (60S ribosomal protein L3 OS=Aspergillus fumigatus GN=rpl3 PE=1 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 1.173e-24 Identity = 55/81 (67.90%), Postives = 64/81 (79.01%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETP 245 SHRK+E PRHGSL FLPRKRAAR VK+FPKDDP K LTA +GYKAGMT +VRD+ +P + +HKK+ EAVTIIETP Sbjct: 2 SHRKYEAPRHGSLAFLPRKRAARHRGKVKSFPKDDPKKPVHLTASMGYKAGMTTVVRDLDRPGAKMHKKEIVEAVTIIETP 82
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL3_YEAST (60S ribosomal protein L3 OS=Saccharomyces cerevisiae GN=RPL3 PE=1 SV=4) HSP 1 Score: 109.383 bits (272), Expect = 5.821e-24 Identity = 54/81 (66.67%), Postives = 63/81 (77.78%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETP 245 SHRK+E PRHG LGFLPRKRAA VKAFPKDD SK LT+FLGYKAGMT IVRD+ +P S HK++ EAVT+++TP Sbjct: 2 SHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREVVEAVTVVDTP 82
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL3_CAEEL (60S ribosomal protein L3 OS=Caenorhabditis elegans GN=rpl-3 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.821e-24 Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETP 245 SHRKF PRHG +GF P+KR+ +KAFPKDD SK LTAFLGYKAGMTHIVRDV KP S ++KK+ EAVTI+ETP Sbjct: 2 SHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVTIVETP 82
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL3_CANGA (60S ribosomal protein L3 OS=Candida glabrata GN=RPL3 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.297e-23 Identity = 53/81 (65.43%), Postives = 63/81 (77.78%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETP 245 SHRK+E PRHG LGFLPRKRAA VK+FPKDD SK LT+FLGYKAGMT IVRD+ +P S HK++ EAVT+++TP Sbjct: 2 SHRKYEAPRHGHLGFLPRKRAASVRGRVKSFPKDDKSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREIVEAVTVVDTP 82
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL3_CAEBR (60S ribosomal protein L3 OS=Caenorhabditis briggsae GN=rpl-3 PE=3 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 1.297e-23 Identity = 54/81 (66.67%), Postives = 62/81 (76.54%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETP 245 SHRKF PRHG +GF P+KR+ +KAFPKDD SK LTAFLGYKAGMTHIVRDV KP S ++KK+ EAV+IIETP Sbjct: 2 SHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDASKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVSIIETP 82
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL3_ASHGO (60S ribosomal protein L3 OS=Ashbya gossypii GN=RPL3 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.212e-23 Identity = 53/81 (65.43%), Postives = 63/81 (77.78%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETP 245 SHRK+E PRHG LGFLPRKRAA VKAFPKDD SK LT+FLGYKAGMT IVRD+ +P S HK++ EAV++++TP Sbjct: 2 SHRKYEAPRHGHLGFLPRKRAASIRGRVKAFPKDDKSKPVALTSFLGYKAGMTTIVRDLDRPGSKFHKREIVEAVSVVDTP 82
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL3_TOXCA (60S ribosomal protein L3 OS=Toxocara canis GN=RPL3 PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 2.889e-23 Identity = 52/81 (64.20%), Postives = 62/81 (76.54%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETP 245 SHRKF PRHGS+GF P+KR+ R VKAFPKDDP+K LTAF+ +KAGMTHIVR+V KP S ++KK+ EAVTI E P Sbjct: 2 SHRKFSAPRHGSMGFTPKKRSKRHRGKVKAFPKDDPTKPIHLTAFIAFKAGMTHIVREVDKPGSKVNKKEVVEAVTIFEAP 82
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL3_DROME (60S ribosomal protein L3 OS=Drosophila melanogaster GN=RpL3 PE=1 SV=3) HSP 1 Score: 107.071 bits (266), Expect = 2.889e-23 Identity = 51/81 (62.96%), Postives = 62/81 (76.54%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETP 245 SHRKF PRHGS+ F P+KR+AR VKAFPKDD SK LT F+GYKAGMTHIVR+ +P S ++KK+ EAVT++ETP Sbjct: 2 SHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVVEAVTVLETP 82
BLAST of FC876386 vs. ExPASy Swiss-Prot
Match: RL3_NEUCR (60S ribosomal protein L3 OS=Neurospora crassa GN=rpl-3 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.436e-23 Identity = 53/81 (65.43%), Postives = 62/81 (76.54%), Query Frame = 3 Query: 3 SHRKFEHPRHGSLGFLPRKRAARPTR*VKAFPKDDPSKACRLTAFLGYKAGMTHIVRDV*KPVS*LHKKDTCEAVTIIETP 245 SHRK+E PRHGSL +LPRKRAAR VK+FPKDD K LTA +GYKAGMT IVRD+ +P + HKK+ EAVTII+TP Sbjct: 2 SHRKYEAPRHGSLAYLPRKRAARHRGKVKSFPKDDAKKPVHLTAAMGYKAGMTTIVRDLDRPGAKAHKKEVVEAVTIIDTP 82 The following BLAST results are available for this feature:
BLAST of FC876386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876386 ID=FC876386; Name=FC876386; organism=Citrus clementina; type=EST; length=256bpback to top |