FC876389

Overview
NameFC876389
Unique NameFC876389
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.812e-20
Identity = 58/180 (32.22%), Postives = 84/180 (46.67%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVF--GDGTGGSDPRADEFKSWLW 695
            PPGPKPWPIVGNL  LG  PH   A LA+T+G +  L++G              + LK HD   S R      +   +    IV+      W+ LRK+    LF+ K ++   HVR+++   +   L     E V + + +   +VN  G ++    +F  GD   GS     EFK +LW
Sbjct:   29 PPGPKPWPIVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMKKQGEEVKIVEVIFGTLVNIFGNLIFSQNIFELGDPNSGS----SEFKEYLW 204          
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.812e-20
Identity = 56/157 (35.67%), Postives = 83/157 (52.87%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALA-SAGTEP-VNLAQRLNLCVVNALGRVMLG 626
            PPGP   PI+GNL  LG   H+S   L++ +GP+M+LR G              + LK HD     RP  S      YN++DI F  YG  WR +RK++ + LFS K L  +R++R+EE  +L + +  SA T+  V+L + L     + + R+  G
Sbjct:   29 PPGPISLPIIGNLHQLGKSLHRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTRPKLSATGLFTYNFKDIGFAQYGEDWREMRKLAMLELFSSKKLKAFRYIREEESELLVKKVTESAQTQTLVDLRKALFSYTASIVCRLAFG 185          
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.333e-19
Identity = 52/162 (32.10%), Postives = 84/162 (51.85%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEP--VNLAQRLNLCVVNALGRVMLGFRVFG 641
            PP P   PI+GNL  LG +PHQS+  L++ +GP+M L+LG              Q LK +D +  +RP   G + ++YNY DI F  +   W+ LRK+    LF  K ++  + +++ EM  L  ++A + ++   VNL+       VN + + + G    G
Sbjct:   31 PPSPPGLPIIGNLHQLGELPHQSLCKLSKKYGPVMLLKLGRVPTVIVSTPETAKQVLKDYDLHCCSRPSLEGTRKLSYNYLDIAFSRFDDYWKELRKLCVEELFCNKRINSIQPIKEAEMEKLIDSIAESASQKTLVNLSDTFLSLNVNVICKAVFGVNFQG 192          
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19
Identity = 56/178 (31.46%), Postives = 83/178 (46.63%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKSWLW 695
            PPGPKPWPIVGNL  LG  PH   A LA+T+G +  L++G              + LK HD   S R      +   +    IV+      W+ LRK+    LF+ K ++   HVR+++   +   L     E V + + +   +VN  G ++    +F  G   S   + EFK +LW
Sbjct:   30 PPGPKPWPIVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMKKQGEEVKIVEVIFGTLVNIFGNLIFSQNIFELGXPNSG--SSEFKEYLW 205          
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19
Identity = 57/167 (34.13%), Postives = 86/167 (51.50%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRL-----NLCVVNALGRVMLGFRVF 638
            PPGP   P +G + HL G +PH+ +  LA  +GPLM+L+LG              Q LK HD  F++RP       I YN +DI F PYG  WR +RKI  + + S K++  +  +R +E+  L  ++    T  E VN  +R+     ++   +A G+V+    VF
Sbjct:   32 PPGPWKLPFIGGMHHLAGGLPHRVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSIQPCFTSGELVNFTERIIWFTSSMTCRSAFGQVLKEQEVF 198          
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19
Identity = 54/162 (33.33%), Postives = 85/162 (52.47%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLGFRVFG 641
            PPGP   PI+GNL  LG  PH+S+  L+  +GPL+YL+LG                LK  D +  +R   +    I+YN +D+ F PY   W+ +RK++ V L++ K +  +R++R+EE+A     +  + +  E VNL Q L     + + RV  G  + G
Sbjct:   30 PPGPPRLPIIGNLHQLGSKPHRSMFKLSEKYGPLVYLKLGKVPSVVASTPETVKDVLKTFDKDCCSRAFLTYPARISYNLKDLAFAPYSKYWKAVRKMTVVELYTAKRVKSFRNIREEEVASFVEFIKHSASLEEIVNLNQTLVKLSGSVICRVGFGINLEG 191          
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.969e-19
Identity = 52/161 (32.30%), Postives = 84/161 (52.17%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVMLGFRVF 638
            PPGPK  PI+GNL     +  ++   LA  +GP+  L+ GF             + LKI+D    +RP  +G +   YN++DI   P+G  W ++RK+S V LFS K L  ++++ +EE  +  + L+   T   PVNL + +   V N + R+  G  ++
Sbjct:   29 PPGPKKLPIIGNLHQRRTLHPRNRRNLAEMYGPVALLQYGFVPVVAISSKEAAEEVLKINDLECCSRPEAAGMRATFYNFKDIGMAPFGDEWSLMRKLSVVELFSVKKLQSFKYIIEEENNLCVKKLSEFATRQSPVNLERAIFTLVGNIVCRIGYGINLY 189          
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.969e-19
Identity = 52/167 (31.14%), Postives = 81/167 (48.50%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGG 656
            PP P   P++GNL  L   PH+S+  L+  +GPLM L  G              + LK HD  F+NRP +     +    +D+VF PYG  WR ++ +  ++L + K +  +  VR+EE+  +   L  AS  +   NL++       +   RV LG + + D T G
Sbjct:   34 PPSPWRIPVIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLEKASCSSSAENLSELFVTLTSDVTSRVSLGKKYWEDETAG 200          
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.877e-19
Identity = 51/181 (28.18%), Postives = 92/181 (50.83%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVN------LAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADEFKS 686
            PPGP+PWP++GNL  + P+  +     A  +GP++ +  G              + LK +D   ++RP N   +  + N QD+++  YGP +  +RK+ ++ LF+ K L+  R +R++E+  +  ++  A T P N      +   L++   N + R+  G R F +  G  D +  EFK+
Sbjct:   32 PPGPRPWPVLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNGQDLIWADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKR-FMNANGDIDEQGREFKT 211          
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.064e-19
Identity = 49/157 (31.21%), Postives = 82/157 (52.23%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL--GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLG 626
            PPGP   PI+GN+ +L   P+PH  +  L+  +G LM+L+LG              + +K HD  F++RP    A+ + Y+++ + F PYG  WR LRKI ++ L S K +  ++ +R+E +    + +A+     VN+ + +   V     R  LG
Sbjct:   36 PPGPWKLPIIGNMHNLVGSPLPHHRLRDLSAKYGSLMHLKLGEVSTIVVSSPEYAKEVMKTHDHIFASRPYVLAAEIMDYDFKGVAFTPYGDYWRQLRKIFALELLSSKRVQSFQPIREEVLTSFIKRMATIEGSQVNVTKEVISTVFTITARTALG 192          
The following BLAST results are available for this feature:
BLAST of FC876389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
C80B1_ESCCA7.812e-2032.22(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C71BL_ARATH7.812e-2035.67Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]
C71BA_ARATH1.333e-1932.10Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C80B2_ESCCA2.273e-1931.46(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C71D7_SOLCH2.273e-1934.13Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71BD_ARATH2.273e-1933.33Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C71BF_ARATH2.969e-1932.30Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH2.969e-1931.14Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C98A1_SORBI3.877e-1928.18Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71D9_SOYBN5.064e-1931.21Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32004B12EF DevOvary1 Citrus clementina cDNA clone C32004B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876389 ID=FC876389; Name=FC876389; organism=Citrus clementina; type=EST; length=712bp
GGCGACTACTCGTACCATTTCTACACTTTCTCTGGGAAACGAAACAAAGA
GCAATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAAT
TGTCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCT
CCCACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTC
CCTCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAAC
CCACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGG
CCGCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAAC
TTCTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTA
TCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGA
AGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGG
CACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGC
AGGAACGGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGTTGTGA
ATGCCCTAGGGCGGGTGATGCTAGGCTTCAGAGTGTTCGGCGACGGTACC
GGAGGGAGCGATCCGAGGGCTGACGAGTTCAAATCATGGTTGTGGAGCTG
ATGGTGCTGGCG
back to top