FC876389

Overview
NameFC876389
Unique NameFC876389
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:1..713. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C71BP_ARATH (Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=CYP71B25 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.614e-19
Identity = 56/174 (32.18%), Postives = 89/174 (51.15%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADE 677
            PPGP   PIVGNL  L  M H+ +  L++ HGP+M+L+LGF             + LK HD     RP  + A+  + N ++I    Y   WR LRK++    FS K +  +R+VR+EE  ++ + L     +  PV+L++ L     + + R + G + F D    S+ + +E
Sbjct:   33 PPGPAKLPIVGNLHQLQGMVHRCLHELSKKHGPVMHLQLGFVPLVLISSSEAAEEALKTHDIECCTRPNTNAARVFSRNNKNIGLGAYSDEWRELRKVAVREYFSVKKVQSFRYVREEENHLMVKKLRDLALKQSPVDLSKTLFCLAASTVFRPVFG-QSFSDNKHFSEEKIEE 205          
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C71B4_ARATH (Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CYP71B4 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 6.614e-19
Identity = 53/161 (32.92%), Postives = 84/161 (52.17%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLGFRVF 638
            PPGP   PI+GNL  L  + H+ +  L++ HGP+M+LRLGF             + LK HD    +RP    ++  + N +DI F  YG  WR LRK+S    FS K +  ++++R+EE  ++ + L    ++  PV+L++ L     + + R   G   F
Sbjct:   33 PPGPAKLPIIGNLHQLQGLLHKCLHDLSKKHGPVMHLRLGFAPMVVISSSEAAEEALKTHDLECCSRPITMASRVFSRNGKDIGFGVYGDEWRELRKLSVREFFSVKKVQSFKYIREEENDLMIKKLKELASKQSPVDLSKILFGLTASIIFRTAFGQSFF 193          
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18
Identity = 51/160 (31.87%), Postives = 85/160 (53.12%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLGFRV 635
            PP P   PI+GNL  L  + H+ +  L++ HGP++ LRLGF             + LK+HD     RP  + +   + + +DI F PYG   R LRK+S ++ FS + +  +R++R+EE  ++ + L  +  +   V+L+Q L   V + + R   G R+
Sbjct:   30 PPSPPKLPIIGNLHQLRGLFHRCLHDLSKKHGPVLLLRLGFIDMVVISSKEAAEEVLKVHDLECCTRPKTNASSKFSRDGKDIAFAPYGEVSRELRKLSLINFFSTQKVRSFRYIREEENDLMVKKLKESAKKKNTVDLSQTLFYLVGSIIFRATFGQRL 189          
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.513e-18
Identity = 50/157 (31.85%), Postives = 78/157 (49.68%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLG 626
            PP P   P++GNL  L   PH+S+  L+  +GPLM L  G                +K HD   +NRP     + I    +++VF PYG  WR ++ +  VHL + K +  +  VR+EE +V+   +  AS+ + P+NL++ L     +   RV  G
Sbjct:   33 PPSPWRVPVIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANRPRLKVIETILNGGREVVFSPYGDYWRQIKTVCVVHLLNKKMVQSFAKVREEERSVMMEKVEKASSDSSPLNLSKLLITLTSDVASRVSFG 189          
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.282e-18
Identity = 50/165 (30.30%), Postives = 81/165 (49.09%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGT 650
            PP P   P++GNL  L   PH+S+  L+  +GPLM L  G              + LK HD  F+NRP +     +    +D+VF PYG  WR ++ +  ++L + K ++ +  VR++E+  +   L  AS+ +   NL++       +   RV LG +   D T
Sbjct:   34 PPSPWRLPVIGNLHQLSLHPHRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLEKASSSSSSENLSELFITLPSDVTSRVALGRKHSEDET 198          
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C93A2_SOYBN (Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.312e-18
Identity = 47/131 (35.88%), Postives = 68/131 (51.91%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAG 554
            PP PK  PI+G+L  + P+PHQ    L+  HGP+M L LG              +FLK H+ NFSNRP     +++A  +   VF PYGP  + ++K+    L  G+ LD +  VRQ+E     + +   G
Sbjct:   30 PPSPKGLPIIGHLHLVSPIPHQDFYKLSLRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRP----GQNVAVQFLTYVFGPYGPSVKFIKKLCMSELLGGRMLDQFLPVRQQETKKFIKRVLQKG 156          
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 7.312e-18
Identity = 51/165 (30.91%), Postives = 86/165 (52.12%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPM-PHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAG--TEPVNLAQRLNLCVVNALGRVMLGFRVFGDG 647
            PPGP P P++GNL  L  + P +  AG A+ +GP++  R+G              + LK  D NF++RPP+ G + I+Y  +D+    Y P +R +RK+   HLFS   +  ++HVR+EE   +   +  A   +E V++++ +     + + R   G +   DG
Sbjct:   31 PPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFGKKYNEDG 195          
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.312e-18
Identity = 54/174 (31.03%), Postives = 85/174 (48.85%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLGFRVFGDGTGGSDPRADE 677
            PP P  +P++GNL  +G +PH+S   LA   G +M L  GF             + L+ HD     RP   G++ I+  ++DI F PYG  WR  RK     LF  K +  + ++ +EE  +L + L  ++ G  PV+L++ L     + L R+  G + F D     + + DE
Sbjct:   31 PPSPPTFPVIGNLHQVGELPHRSFQRLAERTGHVMLLHFGFVPVTVISSREAAEEVLRTHDLKCCTRPKLVGSRLISRGFKDISFTPYGEEWRERRKFLVRELFCFKKVQYFGYIVEEECNLLVKKLTESAVGRPPVDLSKSLFWLAASILFRIAFG-QSFHDNKFIDEDKIDE 203          
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.312e-18
Identity = 49/157 (31.21%), Postives = 79/157 (50.32%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRAL--ASAGTEPVNLAQRLNLCVVNALGRVMLG 626
            PP P   P++GNL  L   PH+S+  L+  +GPLM L  G                +K HD   +NRP     + I    +++VF PYG  WR ++ +  V+L + K +  +  VR+EE++ +   +  AS+ + P+NL++ L     +   RV LG
Sbjct:   34 PPSPWRVPVIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPVLVVSSSDVAHDLMKTHDLKVANRPQLKVVEKIFNGGREMVFSPYGEYWRQIKSVCIVNLLNKKKVQSFEKVREEEISEMMERVEKASSDSSPLNLSELLLTLTSDVTSRVSLG 190          
BLAST of FC876389 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.550e-18
Identity = 48/149 (32.21%), Postives = 81/149 (54.36%), Query Frame = 3
Query:  162 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLN--LCVV 599
            PP P   P++G+L  L G +P      +A+ +GP+ +++LG              Q +K+ D NF++R    G++ + Y+  DI+F PY   WR +R+I    L S K +  + ++RQEE+  L R L S+G  PV++ + ++   CVV
Sbjct:   35 PPSPPKLPVIGHLHFLWGGLPQHVFRSIAQKYGPVAHVQLGEVYSVVLSSAEAAKQAMKVLDPNFADRFDGIGSRTMWYDKDDIIFSPYNDHWRQMRRICVTELLSPKNVRSFGYIRQEEIERLIRLLGSSGGAPVDVTEEVSKMSCVV 183          
The following BLAST results are available for this feature:
BLAST of FC876389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
C71BP_ARATH6.614e-1932.18Cytochrome P450 71B25 OS=Arabidopsis thaliana GN=C... [more]
C71B4_ARATH6.614e-1932.92Cytochrome P450 71B4 OS=Arabidopsis thaliana GN=CY... [more]
C71B3_ARATH1.924e-1831.88Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C71AF_ARATH2.513e-1831.85Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C71AD_ARATH3.282e-1830.30Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C93A2_SOYBN7.312e-1835.88Cytochrome P450 93A2 OS=Glycine max GN=CYP93A2 PE=... [more]
C83A1_ARATH7.312e-1830.91Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
C71BG_ARATH7.312e-1831.03Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71AE_ARATH7.312e-1831.21Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C71DI_MENSP9.550e-1832.21Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]

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Properties
Property NameValue
Genbank descriptionC32004B12EF DevOvary1 Citrus clementina cDNA clone C32004B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876389 ID=FC876389; Name=FC876389; organism=Citrus clementina; type=EST; length=712bp
GGCGACTACTCGTACCATTTCTACACTTTCTCTGGGAAACGAAACAAAGA
GCAATGTCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAAT
TGTCATTTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCT
CCCACCGTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTC
CCTCACTTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAAC
CCACGGCCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGG
CCGCTTCCGCTTCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAAC
TTCTCCAACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTA
TCAGGACATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGA
AGATCAGCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGG
CACGTTCGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGC
AGGAACGGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGTTGTGA
ATGCCCTAGGGCGGGTGATGCTAGGCTTCAGAGTGTTCGGCGACGGTACC
GGAGGGAGCGATCCGAGGGCTGACGAGTTCAAATCATGGTTGTGGAGCTG
ATGGTGCTGGCG
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