FC876391

Overview
NameFC876391
Unique NameFC876391
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.180e-12
Identity = 59/195 (30.26%), Postives = 95/195 (48.72%), Query Frame = 1
Query:   97 VSFYTAQLLLIFLAXXXXXXNCCPPSERAALLAFKAALHEPYLGIFNSWT-GNDCCH-NWYGVSC---DQETHRVADINLRGESEDPIFQRAHRT------GYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIG-RLHRLAVLNIADNNISGAIPPSIANLSSLMHL 645
            ++F TA  L +F +           SE  +L++FK +L  P L   +SW   +   H +W GV+C      +  +  ++LRG+    I    +           +G I P +  L  L +L L+    +TG +PR +S +P L  LDL  N  SG +P      L  L+ L++++N++SG IPP I  LS+L +L
Sbjct:    1 MAFLTALFLFLFFSFSSSAIVDLS-SETTSLISFKRSLENPSL--LSSWNVSSSASHCDWVGVTCLLGRVNSLSLPSLSLRGQIPKEISSLKNLRELCLAGNQFSGKIPPEIWNLKHLQTLDLSG-NSLTGLLPRLLSELPQLLYLDLSDNHFSGSLPPSFFISLPALSSLDVSNNSLSGEIPPEIGKLSNLSNL 191          
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: Y4372_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g37250 OS=Arabidopsis thaliana GN=At4g37250 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.130e-12
Identity = 48/166 (28.92%), Postives = 83/166 (50.00%), Query Frame = 1
Query:  172 SERAALLAFKAALHEPYLGIFNSWT-GNDCCHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNTEF 666
            S+   L+ FK+++    L +  +W   ++   +W G+SC+ ++ +V  ++L                 + G I   +  L  L SL L++     G +P    +   LR LDL  N +SG+IP  IG LH L  LN++DN ++G +P ++A+L +L  + L N  F
Sbjct:   24 SDGLVLMKFKSSVLVDPLSLLQTWNYKHESPCSWRGISCNNDS-KVLTLSLPNSQ-------------LLGSIPSDLGSLLTLQSLDLSN-NSFNGPLPVSFFNARELRFLDLSSNMISGEIPSAIGDLHNLLTLNLSDNALAGKLPTNLASLRNLTVVSLENNYF 174          
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: Y3475_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.130e-12
Identity = 49/168 (29.17%), Postives = 82/168 (48.81%), Query Frame = 1
Query:  172 SERAALLAFKAALHEPYLGIFNSWTGNDCCHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNTEFRAR 675
            ++R ALL FK+ + E    + +SW  +    NW GV+C ++  RV  + L G  +            + G ISP++  L+ L SL L +     G IP+ +  +  L  LD+  N L G IP  +    RL  L +  N + G++P  + +L++L+ L+L     R +
Sbjct:   24 TDRQALLQFKSQVSEDKRVVLSSWNHSFPLCNWKGVTCGRKNKRVTHLEL-GRLQ------------LGGVISPSIGNLSFLVSLDLYE-NFFGGTIPQEVGQLSRLEYLDMGINYLRGPIPLGLYNCSRLLNLRLDSNRLGGSVPSELGSLTNLVQLNLYGNNMRGK 177          
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: IMK3_ARATH (Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana GN=IMK3 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.130e-12
Identity = 53/158 (33.54%), Postives = 78/158 (49.37%), Query Frame = 1
Query:  187 LLAFKAALHEPYLGIFNSWTGND---CCHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDL 651
            L A K  L +P  G   SW G+    C   W G+ C Q   +V  I L  +S             + G IS  + +L  L  L+L D   + G IP  +  IP LR + L  N+L+G IP  +G  H L  L++++N +S  IPP++A+ S L+ L+L
Sbjct:   64 LQAVKQELIDPR-GFLRSWNGSGFSACSGGWAGIKCAQG--QVIVIQLPWKS-------------LGGRISEKIGQLQALRKLSLHD-NNLGGSIPMSLGLIPNLRGVQLFNNRLTGSIPASLGVSHFLQTLDLSNNLLSEIIPPNLADSSKLLRLNL 204          
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12
Identity = 41/98 (41.84%), Postives = 59/98 (60.20%), Query Frame = 1
Query:  373 MTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNTEF 666
            ++G I   +  L  L +L L D+  +TG IP  +S+   L  + L  N+LSG+IP  +GRL  LA+L + +N+ISG IP  + N  SL+ LDL NT F
Sbjct:  487 LSGEIPQELMYLQALENLIL-DFNDLTGPIPASLSNCTKLNWISLSNNQLSGEIPASLGRLSNLAILKLGNNSISGNIPAELGNCQSLIWLDL-NTNF 582          
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.312e-12
Identity = 41/98 (41.84%), Postives = 59/98 (60.20%), Query Frame = 1
Query:  373 MTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNTEF 666
            ++G I   +  L  L +L L D+  +TG IP  +S+   L  + L  N+LSG+IP  +GRL  LA+L + +N+ISG IP  + N  SL+ LDL NT F
Sbjct:  487 LSGEIPQELMYLQALENLIL-DFNDLTGPIPASLSNCTKLNWISLSNNQLSGEIPASLGRLSNLAILKLGNNSISGNIPAELGNCQSLIWLDL-NTNF 582          
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: Y4294_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20940 OS=Arabidopsis thaliana GN=At4g20940 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11
Identity = 50/168 (29.76%), Postives = 78/168 (46.43%), Query Frame = 1
Query:  166 PPSERAALLAFKAAL-HEPYLGIFNSWTG-----NDCCHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDL 651
            P  +  ALL FK  + H+P   + NSW       N C  +W G+ C+        ++  G + D  F                   LT+L  L++++   ++G +P  + S   L+ LDL  N  S  +P++IGR   L  L+++ NN SG IP S+  L SL  LD+
Sbjct:    5 PSQDIMALLEFKKGIKHDPTGFVLNSWNDESIDFNGCPSSWNGIVCNGGNVAGVVLDNLGLTADADFS--------------LFSNLTKLVKLSMSN-NSLSGVLPNDLGSFKSLQFLDLSDNLFSSSLPKEIGRSVSLRNLSLSGNNFSGEIPESMGGLISLQSLDM 157          
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.216e-11
Identity = 51/163 (31.29%), Postives = 81/163 (49.69%), Query Frame = 1
Query:  172 SERAALLAFKAALHEPYLGIFNSWTGNDCCH-NWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRN 657
            S+  ALL+ K     P   +F+SW   D    +WYG++C  + +RV  +++                ++     P +  L+ L  L L+    ++G IP     +  LR+LDL  N LSG IP ++GRL  L  L +  N +SG+IP  I+NL +L  L L++
Sbjct:   29 SDGQALLSLK----RPSPSLFSSWDPQDQTPCSWYGITCSAD-NRVISVSIPDT-------------FLNLSSIPDLSSLSSLQFLNLSS-TNLSGPIPPSFGKLTHLRLLDLSSNSLSGPIPSELGRLSTLQFLILNANKLSGSIPSQISNLFALQVLCLQD 172          
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.588e-11
Identity = 39/98 (39.80%), Postives = 58/98 (59.18%), Query Frame = 1
Query:  370 YMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRNTE 663
            ++TG+I P + KLT L  L +A+   + G IP  +SS   L  L++ GNK SG IPR   +L  +  LN++ NNI G IP  ++ + +L  LDL N +
Sbjct:  342 HLTGHIPPELGKLTDLFDLNVAN-NDLEGPIPDHLSSCTNLNSLNVHGNKFSGTIPRAFQKLESMTYLNLSSNNIKGPIPVELSRIGNLDTLDLSNNK 438          

HSP 2 Score: 68.9366 bits (167), Expect = 2.709e-11
Identity = 55/162 (33.95%), Postives = 80/162 (49.38%), Query Frame = 1
Query:  175 ERAALLAFKAALHEPYLGIFNSWT---GNDCCHNWYGVSCDQETHRVADINLRGESEDPIFQRAHRTGYMTGYISPAVCKLTRLSSLTLADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDL 651
            E A LL  K +  +    +   WT    +D C  W GVSC+  T  V  +NL   + D             G ISPA+  L  L S+ L   + ++G+IP  I     L+ LDL  N+LSGDIP  I +L +L  L + +N + G IP +++ + +L  LDL
Sbjct:   26 EGATLLEIKKSFKDVN-NVLYDWTTSPSSDYCV-WRGVSCENVTFNVVALNLSDLNLD-------------GEISPAIGDLKSLLSIDLRGNR-LSGQIPDEIGDCSSLQNLDLSFNELSGDIPFSISKLKQLEQLILKNNQLIGPIPSTLSQIPNLKILDL 171          
BLAST of FC876391 vs. ExPASy Swiss-Prot
Match: SRF1_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsis thaliana GN=SRF1 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.075e-11
Identity = 52/169 (30.77%), Postives = 81/169 (47.93%), Query Frame = 1
Query:  169 PSERAALLAFKAALHEPYLGIFNSWTGNDCCHNWYGVSCDQ---ETHRVADINLRGESEDPI--FQRAHRTGYMTGYISPAVCKLTRLSSLTL-ADWKGITGEIPRCISSIPFLRILDLIGNKLSGDIPRDIGRLHRLAVLNIADNNISGAIPPSIANLSSLMHLDLRN 657
            P + AA+ +   AL  P L  + +  G+ C  +W GV C+    ET  +   NL GE    +  F       +   +I  ++     +S   L       TG IP  +SS+  L ++ L  N LSG IP     L  +  ++++ NN+SG +PPS+ NLS+L  L L+N
Sbjct:   35 PDDVAAINSLFLALESPLLPGWVASGGDPCGESWQGVLCNASQVETIILISANLGGELGVGLNMFTSLKAMDFSNNHIGGSIPSTLPVSLQNLFLSGNNFTGTIPESLSSLKSLSVMSLNNNLLSGKIPDVFQDLGLMINIDLSSNNLSGPLPPSMQNLSTLTSLLLQN 203          
The following BLAST results are available for this feature:
BLAST of FC876391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
EXS_ARATH4.180e-1230.26Leucine-rich repeat receptor protein kinase EXS OS... [more]
Y4372_ARATH7.130e-1228.92Probable LRR receptor-like serine/threonine-protei... [more]
Y3475_ARATH7.130e-1229.17Probable LRR receptor-like serine/threonine-protei... [more]
IMK3_ARATH7.130e-1233.54Probable leucine-rich repeat receptor-like protein... [more]
BRI1_SOLPE9.312e-1241.84Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_SOLLC9.312e-1241.84Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
Y4294_ARATH1.216e-1129.76Probable LRR receptor-like serine/threonine-protei... [more]
Y1341_ARATH1.216e-1131.29Probable LRR receptor-like serine/threonine-protei... [more]
ERECT_ARATH1.588e-1139.80LRR receptor-like serine/threonine-protein kinase ... [more]
SRF1_ARATH2.075e-1130.77Protein STRUBBELIG-RECEPTOR FAMILY 1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionC32004C02EF DevOvary1 Citrus clementina cDNA clone C32004C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876391 ID=FC876391; Name=FC876391; organism=Citrus clementina; type=EST; length=677bp
GCCATGCCCATGCTCAAAACTCAATCCACTTCACTTCCCAACGTAAACCC
AAAACTCATCGTTTCGGATCAAGCAAAAACCAACATGGGTGGCTGTGTCT
CGTTTTACACTGCACAGCTTCTTCTAATCTTCCTCGCCGTTAGTTCTTCC
GTCGTTAACTGCTGCCCGCCGTCAGAGCGGGCAGCACTCTTAGCCTTCAA
AGCTGCCCTCCACGAGCCTTACTTGGGCATCTTCAACTCCTGGACGGGCA
ACGACTGTTGCCACAACTGGTACGGTGTTAGCTGTGACCAGGAAACTCAC
CGGGTCGCTGACATTAACCTACGTGGCGAGTCTGAGGACCCGATATTCCA
GCGGGCCCACCGAACCGGGTACATGACCGGGTATATCTCACCCGCTGTGT
GTAAACTCACGCGTCTCTCCAGTTTAACGCTCGCCGACTGGAAAGGCATC
ACCGGGGAAATCCCACGTTGCATTTCTTCAATTCCTTTTCTCCGCATTCT
TGATTTAATCGGAAATAAGTTATCGGGCGACATTCCCCGAGATATTGGCC
GGCTTCACAGACTCGCTGTCTTAAATATCGCCGATAACAACATATCGGGT
GCGATTCCCCCTTCCATTGCTAATCTTTCCAGCTTGATGCATCTTGACTT
GCGTAACACAGAATTTCGGGCCCGATT
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