FC876399

Overview
NameFC876399
Unique NameFC876399
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig8669 contig Ccv1_Contig8669:60..772. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876399 vs. ExPASy Swiss-Prot
Match: SAE1_XENLA (SUMO-activating enzyme subunit 1 OS=Xenopus laevis GN=sae1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.269e-18
Identity = 49/168 (29.17%), Postives = 87/168 (51.79%), Query Frame = 1
Query:  124 EPKTKYDRQLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGQSKAKSVCAFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTGFVRISVKEHTVVESK 627
            E   +YDRQ+R+WG + Q  L  + V L+     G+E  KNL+L G+ ++T++D  +V   D    F++    +GQ++A++     + LN  V    +E   E + + +  FF+QF +V  T    + +++++ IC + N+       YG  G +   + EH  VE K
Sbjct:   12 EEAAQYDRQIRLWGLEAQKRLRTSRVLLVGMRGLGAEVAKNLILAGVKALTLLDHEQVSSEDSRAQFLIPSGSLGQNRAEASLNRARNLNPMVS---VEADTENINQKSDDFFTQFDVVCLTSCPSDLLVRVNHICHKHNIKFFTGDVYGYHGSMFADLGEHEFVEEK 176          
BLAST of FC876399 vs. ExPASy Swiss-Prot
Match: SAE1_DICDI (SUMO-activating enzyme subunit 1 OS=Dictyostelium discoideum GN=sae1 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.281e-18
Identity = 48/148 (32.43%), Postives = 79/148 (53.38%), Query Frame = 1
Query:  139 YDRQLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGQSKAKSVCAFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTG 582
            YDR +R+WG   QA L ++ V  +      SE +KN+VL G+ SIT++D   +   DL  +  ++E  VG+  +      + ELN  V    I+ Y + +  M+  F   +T+VV +      + K++ +CR+ NV  IF+ S+GL G
Sbjct:   27 YDRSIRLWGVDAQAKLRQSKVLFIGINGLMSEIIKNVVLAGVDSITLVDDHIITTSDLSAHLFINEDSVGKVISTESVFAISELNPLVT---IDVYDKEIETMDDQFIKNYTMVVISDKNLNNVSKVNSLCRKNNVSFIFSHSFGLKG 171          
BLAST of FC876399 vs. ExPASy Swiss-Prot
Match: SAE1_DANRE (SUMO-activating enzyme subunit 1 OS=Danio rerio GN=sae1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.995e-16
Identity = 52/175 (29.71%), Postives = 86/175 (49.14%), Query Frame = 1
Query:  109 TAAMAEPKTKYDRQLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGQSKAKSVCAFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTGFVRISV-KEHTVVESKP 630
            T    E   +YDRQ+R+WG   Q  L  + V L+     G+E  KNL+L G+  +T++D  +V        F++     GQ+ A++     Q LN  V+ K   E  E+  +    FF QF  V  T+   + M+++D++C   N+ +     YG  G++   + +E+  VE KP
Sbjct:   10 TIISEEEAAQYDRQIRLWGLDAQKRLRGSRVLLVGLRGLGAEVAKNLILAGVKGLTLLDHEQVTEESRRAQFLIPVDADGQNHAQASLERAQFLNPMVEVKADTEPVESKPD---DFFFQFDAVCLTRCSRDLMVRVDQLCASRNIKVFCGDVYGYNGYMFSDLGQEYHYVEEKP 181          
BLAST of FC876399 vs. ExPASy Swiss-Prot
Match: UBE11_WHEAT (Ubiquitin-activating enzyme E1 1 OS=Triticum aestivum GN=UBA1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14
Identity = 51/152 (33.55%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  139 YDRQLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGQSKAKSVCAFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARS--YGLTGFV 588
            + RQL ++G +    L  ++V +      G+E  KNLVL G+ S+T+ D   VE+ DL +NF L E+ VGQ++A++    LQELN+AV    +        ++     S+F  VV T +  +K I+ D  C      + F +S   GL G V
Sbjct:   48 HSRQLAVYGRETMKRLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSSNFFLSENDVGQNRAQACVQKLQELNNAVLVSALTG------DLTKEHLSKFQAVVFTDISLDKAIEFDDYCHSQQPPIAFIKSEVRGLFGSV 193          
BLAST of FC876399 vs. ExPASy Swiss-Prot
Match: UBE12_WHEAT (Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum GN=UBA2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.863e-14
Identity = 51/152 (33.55%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  139 YDRQLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGQSKAKSVCAFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARS--YGLTGFV 588
            + RQL ++G +    L  ++V +      G+E  KNLVL G+ S+T+ D   VE+ DL +NF L E+ VGQ++A++    LQELN+AV    +        ++     S+F  VV T +  +K I+ D  C      + F +S   GL G V
Sbjct:   48 HSRQLAVYGRETMKPLFGSNVLVSGLQGLGAEIAKNLVLAGVKSVTLHDDGNVELWDLSSNFFLSENDVGQNRAQACVQKLQELNNAVLVSALTG------DLTKEHLSKFQAVVFTDISLDKAIEFDDYCHSHQPPIAFIKSEVRGLFGSV 193          
BLAST of FC876399 vs. ExPASy Swiss-Prot
Match: SAE1_CAEEL (SUMO-activating enzyme subunit aos-1 OS=Caenorhabditis elegans GN=aos-1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.379e-14
Identity = 53/178 (29.78%), Postives = 87/178 (48.88%), Query Frame = 1
Query:  139 YDRQLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGQSKAKSVCA---FLQELNDAVKAKFIEEYPEALIEMN----PPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTGFVRISVKEHT-VVESKPDHFLDD 648
            YDRQ+R+WG + Q  +  + V ++     G+E  K L L G+  + ++D   V+  ++G NF+ D S V  SK     A   FL  LN  VK   +E   E ++  N      + ++FTLVV      E+  K++ ICR+ ++  I    YG  G+       H  +V++K    L++
Sbjct:   11 YDRQIRLWGMEAQNKIRNSKVLIIGGKQLGAEVAKTLSLAGVDEMHLVDHRLVDTEEIGMNFLYDAS-VDNSKMTKWAASYNFLYNLNRNVKLFIVE---EDVLSKNDSEIEEYLTKFTLVVVLDESYERTAKVNNICRKHHIRFISGAIYGWIGYAFFDFDGHAYLVKAKSPDCLNE 184          
BLAST of FC876399 vs. ExPASy Swiss-Prot
Match: UBA1_YEAST (Ubiquitin-activating enzyme E1 1 OS=Saccharomyces cerevisiae GN=UBA1 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.331e-14
Identity = 58/203 (28.57%), Postives = 94/203 (46.31%), Query Frame = 1
Query:  109 TAAMAEPKTKYDRQLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGQSKAKSVCAFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQ-LGEEKMIKLDRICREANVMLIFARSYGLTGFVRISV-KEHTVVES-------------KPDHFLDDLRLNTHGL 672
            +AA    ++ Y RQL + G++    ++ ++V +L     G E  KN+VL G+ S+TV D   V++ DL   F L E  +GQ +     A L ELN  V    ++   +          SQF +VVAT  +  E  +K++  C  + +  I + + GL G   + +  E TV++              +PD  +  L  N HGL
Sbjct:    9 SAAGEIDESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDIGQKRGDVTRAKLAELNAYVPVNVLDSLDDV------TQLSQFQVVVATDTVSLEDKVKINEFCHSSGIRFISSETRGLFGNTFVDLGDEFTVLDPTGEEPRTGMVSDIEPDGTVTMLDDNRHGL 205          
BLAST of FC876399 vs. ExPASy Swiss-Prot
Match: UBE13_WHEAT (Ubiquitin-activating enzyme E1 3 OS=Triticum aestivum GN=UBA3 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.166e-13
Identity = 49/152 (32.24%), Postives = 75/152 (49.34%), Query Frame = 1
Query:  139 YDRQLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGQSKAKSVCAFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARS--YGLTGFV 588
            + RQL ++G +    L  + V +      G+E  KNL L G+ S+T+ D   V++ DL  NF L E  +G+++A +  A LQELN+AV    + E      E+     S+F  VV T +  +K  + D  C      + F +S   GL G V
Sbjct:   51 HSRQLAVYGRETMRRLFASDVLVSGLNGLGAEIAKNLALAGVKSVTIHDVKTVKMWDLSGNFFLSEDDIGKNRAAACVAKLQELNNAVLISALTE------ELTTEHLSKFQAVVFTDIDLDKAYEFDDYCHNHQPPISFIKSEVCGLFGSV 196          
BLAST of FC876399 vs. ExPASy Swiss-Prot
Match: UBA1_SCHPO (Ubiquitin-activating enzyme E1 1 OS=Schizosaccharomyces pombe GN=ptr3 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.680e-12
Identity = 40/150 (26.67%), Postives = 72/150 (48.00%), Query Frame = 1
Query:  139 YDRQLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGQSKAKSVCAFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTGFV 588
            Y RQL + G +    + +++V ++ C   G E  KN+ L G+ S+T+ D     + DL + + L E  +G  +AK   + L ELN  V    ++       E++  +   F  VV T+    K ++++    + ++  I A S GL G +
Sbjct:   20 YSRQLYVLGHEAMKQMSQSNVLIIGCKGLGVEIAKNVCLAGVKSVTLYDPQPTRIEDLSSQYFLTEDDIGVPRAKVTVSKLAELNQYVPVSVVD-------ELSTEYLKNFKCVVVTETSLTKQLEINDFTHKNHIAYIAADSRGLFGSI 162          
BLAST of FC876399 vs. ExPASy Swiss-Prot
Match: UBA1_RAT (Ubiquitin-like modifier-activating enzyme 1 OS=Rattus norvegicus GN=Uba1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.571e-12
Identity = 45/148 (30.41%), Postives = 73/148 (49.32%), Query Frame = 1
Query:  139 YDRQLRIWGEQGQAALEKASVCLLNCGPTGSETLKNLVLGGIGSITVIDGSKVEVGDLGNNFMLDESCVGQSKAKSVCAFLQELNDAVKAKFIEEYPEALIEMNPPFFSQFTLVVATQLGEEKMIKLDRICREANVMLIFARSYGLTG 582
            Y RQL + G +    L+ +SV +      G E  KN++LGG+ ++T+ D    +  DL + F L E  +G+++A+     L ELN  V    +  Y   L+E    F S F +VV T    E+ +++   C    + L+ A + GL G
Sbjct:   55 YSRQLYVLGHEAMKMLQTSSVLVSGLRGLGVEIAKNIILGGVKAVTLHDQGTTQWADLSSQFYLREEDIGKNRAEVSQPRLAELNSYVP---VTAYTGPLVE---DFLSGFQVVVLTNSPLEEQLRVGEFCHSRGIKLVVADTRGLFG 196          
The following BLAST results are available for this feature:
BLAST of FC876399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
SAE1_XENLA4.269e-1829.17SUMO-activating enzyme subunit 1 OS=Xenopus laevis... [more]
SAE1_DICDI7.281e-1832.43SUMO-activating enzyme subunit 1 OS=Dictyostelium ... [more]
SAE1_DANRE3.995e-1629.71SUMO-activating enzyme subunit 1 OS=Danio rerio GN... [more]
UBE11_WHEAT2.192e-1433.55Ubiquitin-activating enzyme E1 1 OS=Triticum aesti... [more]
UBE12_WHEAT2.863e-1433.55Ubiquitin-activating enzyme E1 2 OS=Triticum aesti... [more]
SAE1_CAEEL6.379e-1429.78SUMO-activating enzyme subunit aos-1 OS=Caenorhabd... [more]
UBA1_YEAST8.331e-1428.57Ubiquitin-activating enzyme E1 1 OS=Saccharomyces ... [more]
UBE13_WHEAT3.166e-1332.24Ubiquitin-activating enzyme E1 3 OS=Triticum aesti... [more]
UBA1_SCHPO2.680e-1226.67Ubiquitin-activating enzyme E1 1 OS=Schizosaccharo... [more]
UBA1_RAT4.571e-1230.41Ubiquitin-like modifier-activating enzyme 1 OS=Rat... [more]

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Properties
Property NameValue
Genbank descriptionC32004C10EF DevOvary1 Citrus clementina cDNA clone C32004C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876399 ID=FC876399; Name=FC876399; organism=Citrus clementina; type=EST; length=713bp
GGCGTAGTTAAGAAGCACTTGAAAGAGCACGGAGAGCTTCTCATTTTACT
GCGGCCACGAAATAGAAAAACGAAATTTTAAATAAAGAAAAAAGAAAAAA
ACACACGAACAGCAGCAATGGCGGAACCAAAAACCAAATACGACCGCCAG
CTCAGGATCTGGGGTGAGCAAGGGCAAGCAGCTCTTGAAAAGGCAAGTGT
ATGCTTGCTCAACTGTGGTCCTACAGGTTCCGAGACTTTGAAAAATCTGG
TTCTTGGCGGGATTGGAAGCATTACAGTAATTGATGGGTCTAAAGTTGAA
GTGGGTGACCTTGGAAACAATTTTATGTTGGATGAGTCATGTGTTGGGCA
ATCAAAAGCCAAGTCTGTGTGTGCATTTCTTCAAGAGCTCAACGATGCTG
TTAAAGCCAAGTTTATTGAGGAGTATCCTGAGGCACTGATTGAAATGAAC
CCTCCCTTCTTCTCTCAGTTTACTTTGGTTGTGGCCACACAGCTGGGAGA
AGAAAAAATGATAAAGCTTGATAGAATCTGTAGAGAGGCAAATGTGATGT
TGATTTTTGCTCGCTCCTATGGCCTCACTGGGTTTGTTCGAATCAGTGTG
AAGGAACATACAGTGGTTGAGTCAAAGCCTGATCATTTTCTGGATGACCT
TCGATTAAATACCCATGGCCTGAGCTAANGAATTTGCAGAACATTCGATT
TGATGTCCTGATC
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