FC876402

Overview
NameFC876402
Unique NameFC876402
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length593
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10349 contig Ccv1_Contig10349:1..593. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: CBP1_HORVU (Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CBP1 PE=1 SV=4)

HSP 1 Score: 160.229 bits (404), Expect = 6.919e-39
Identity = 73/147 (49.66%), Postives = 97/147 (65.99%), Query Frame = 1
Query:  151 ITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            +T LPGFDG LP K   GY+ V E     LFYY +ESER P  DP+VLWL+GGPGCS F    Y+ GP +F+   S ++ PKL LNPY+W+KV+++I++D+PAG G SY KN   +   D  +A  ++ FL KW   +P FL+NP Y
Sbjct:   37 VTGLPGFDGALPSKHYAGYVTVDEGHGRNLFYYVVESERDPGKDPVVLWLNGGPGCSSFDGFVYEHGPFNFESGGSVKSLPKLHLNPYAWSKVSTMIYLDSPAGVGLSYSKNVSDYETGDLKTATDSHTFLLKWFQLYPEFLSNPFY 183          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP20_ARATH (Serine carboxypeptidase-like 20 OS=Arabidopsis thaliana GN=SCPL20 PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 6.476e-37
Identity = 67/148 (45.27%), Postives = 95/148 (64.19%), Query Frame = 1
Query:  148 IITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            +IT LPGF+G  P K  +GY+ + +     L+YYFIESE++P  DP+VLWL+GGPGCS      Y+ GP +F+      + P L LNPYSW+KV++II++D+P G GFSY  N   ++  D  +AV ++ FL KW    P F +NP +
Sbjct:   34 LITKLPGFEGTFPSKHYSGYVTIDKEHGKNLWYYFIESEKNPSKDPVVLWLNGGPGCSSMDGFVYEHGPFNFELPKKNNSLPLLHLNPYSWSKVSNIIYLDSPVGVGFSYSNNKSDYITGDIKTAVDSHAFLLKWFQMFPEFQSNPFF 181          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP21_ARATH (Serine carboxypeptidase-like 21 OS=Arabidopsis thaliana GN=SCPL21 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.595e-35
Identity = 68/148 (45.95%), Postives = 98/148 (66.22%), Query Frame = 1
Query:  148 IITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            +IT LPGF+G  P K   GY+ + ++ N  L+YYF+ESER+   DP+VLWL+GGPGCS      Y+ GP  F++E  ++NS  L LNPYSW+KV++II++D+P G GFSY  +   +  +DT +A  T+ FL +W    P F +NP +
Sbjct:   29 LITNLPGFNGTFPSKHYAGYVAIDKHRNKNLWYYFVESERNASVDPVVLWLNGGPGCSSMDGFVYEHGP--FNFEPKKKNSHLLHLNPYSWSKVSNIIYLDSPVGVGFSYSNDNADYTTDDTKTASDTHTFLLEWFKMFPEFQSNPFF 174          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP53_ARATH (Putative serine carboxypeptidase-like 53 OS=Arabidopsis thaliana GN=SCPL53 PE=5 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 9.700e-25
Identity = 59/151 (39.07%), Postives = 79/151 (52.32%), Query Frame = 1
Query:  142 RQIITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFV-MNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            R +I  LPG    + FK   GY+ V E+    L+YYF+E+  +    PLVLWL+GGPGCS  +    +LGP     +N       L  NPYSW  VA+++F+++PAGTGFSY           D  +A   Y FL KWL   P +     Y
Sbjct:   77 RDLIENLPG-QPSVNFKQYGGYVTVNESAGRSLYYYFVEATNTKNSSPLVLWLNGGPGCSSLYGAFQELGPFRVHSDNK-----TLYTNPYSWNNVANMLFLESPAGTGFSYTNTTTDMENPGDMKTAADNYVFLVKWLERFPEYKGRDFY 221          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCPL1_DICDI (Serine carboxypeptidase S10 family member 1 OS=Dictyostelium discoideum GN=DDB_G0291912 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.822e-24
Identity = 54/131 (41.22%), Postives = 76/131 (58.02%), Query Frame = 1
Query:  199 TGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            +GY  V E  N  LFY F ES+ SP  DPL+LWL+GGPGCS   A  Y+ GP   +      ++  L  NP SW  VA+++++D+P G GFSYV +  G+   +T  +   Y FL ++L  +P +   PLY
Sbjct:   27 SGYFNVNETTNANLFYLFYESQNSPSTDPLILWLTGGPGCSSLMAAFYENGPYFVN------DNLTLSENPNSWNMVANVLYVDSPLGAGFSYVVDSDGYSTTETEISENLYSFLTQFLSKYPKYSKLPLY 151          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP39_ARATH (Serine carboxypeptidase-like 39 OS=Arabidopsis thaliana GN=SCPL39 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.212e-24
Identity = 60/152 (39.47%), Postives = 85/152 (55.92%), Query Frame = 1
Query:  142 RQIITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMN--DTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            R +I  LPG    + F+   GY+ V E+    L+YYF+E+ ++ +  PLVLWL+GGPGCS  +    +LGP    Y + +     L  NPYSW  VA+I+F+++P GTGFSY  N +  + N  D  +A   Y FL KWL   P +     Y
Sbjct:   77 RDLIENLPG-QPSVSFRQYGGYVTVNESAGRSLYYYFVEATKTKKSLPLVLWLNGGPGCSSLYGAFQELGPFRI-YGDGK----TLYTNPYSWNNVANILFLESPVGTGFSYT-NTESDLENPGDMKAAADKYIFLVKWLERFPEYKGREFY 221          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP34_ARATH (Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.072e-23
Identity = 61/150 (40.67%), Postives = 89/150 (59.33%), Query Frame = 1
Query:  151 ITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCS--GFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGF-VMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            +  LPG    + F+   GY+ V E     LFY+F E+ ++P   P++LWL+GGPGCS  GF A A +LGP  F  +NS  + PKL LNPYSW K A+++F+++P G GFSY    +    + DT++A  +Y FL  W    P + ++  Y
Sbjct:   52 VKELPG-QPPVKFRQYAGYVTVNETHGRALFYWFFEATQNPSKKPVLLWLNGGPGCSSIGFGA-AEELGP--FFPQNS--SQPKLKLNPYSWNKAANLLFLESPVGVGFSYTNTSRDIKQLGDTVTARDSYNFLVNWFKRFPQYKSHDFY 195          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP36_ARATH (Serine carboxypeptidase-like 36 OS=Arabidopsis thaliana GN=SCPL36 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.642e-22
Identity = 52/150 (34.67%), Postives = 74/150 (49.33%), Query Frame = 1
Query:  142 RQIITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            + +I  LPG   D+ FK   GY+ V +     L+YYF+E+ +     PLV+W +GGPGCS       +LGP          +   L  NPYSW   A+++F++ P GTGFSY  +       D  +A   Y FL  WL   P +    +Y
Sbjct:   61 KDLIQQLPGQPSDVTFKQYGGYVAVNKPAGRFLYYYFVETIKPGNTTPLVIWFNGGPGCSSLGGAFKELGPF-----RVHSDGKTLFRNPYSWNNEANVLFLETPVGTGFSYSNSPINGKQGDKATAEDNYMFLVNWLERFPEYKGRDIY 205          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: YUW5_CAEEL (Uncharacterized serine carboxypeptidase F41C3.5 OS=Caenorhabditis elegans GN=F41C3.5 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.686e-22
Identity = 52/141 (36.88%), Postives = 82/141 (58.16%), Query Frame = 1
Query:  151 ITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSF 573
            I  LPG D +  FK  +G+  V  +DN  L Y+F+ES+  P +DPL+ W +GGPGCS    L  ++GP       + E+   L  N YSW K+AS+++I++PAG G+SY  +      ND L++++ Y  ++++    P F
Sbjct:   19 IKDLPGLDFEPNFKHYSGFFQV--SDNHVLHYWFVESQNEPSNDPLIFWFNGGPGCSSLDGLLNEMGPYV-----ANEDGKTLRENEYSWNKMASVVYIESPAGVGYSYATD-GNITTNDDLTSLENYEAVKQFFTEFPQF 151          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: YUA6_CAEEL (Uncharacterized serine carboxypeptidase F13S12.6 OS=Caenorhabditis elegans GN=F13D12.6 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.686e-22
Identity = 58/148 (39.19%), Postives = 79/148 (53.38%), Query Frame = 1
Query:  148 IITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            +IT LPG      FK  +GY  VG   N  L Y+F+ES+ +P  DP++LWL+GGPGCSG  AL  + GP      N   +   L  NPYSW K ASI+ ++APAG G+SY  +       D  +A + +  L  +    P +  N  Y
Sbjct:   23 LITNLPGAPIS-NFKQYSGYYNVGTKKNHMLHYWFVESQSNPSTDPVLLWLTGGPGCSGLSALLTEWGPW-----NVNTDGATLRTNPYSWNKNASILTLEAPAGVGYSYATD-NNIATGDDQTASENWEALVAFFNEFPQYKGNDFY 163          
The following BLAST results are available for this feature:
BLAST of FC876402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
CBP1_HORVU6.919e-3949.66Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CB... [more]
SCP20_ARATH6.476e-3745.27Serine carboxypeptidase-like 20 OS=Arabidopsis tha... [more]
SCP21_ARATH1.595e-3545.95Serine carboxypeptidase-like 21 OS=Arabidopsis tha... [more]
SCP53_ARATH9.700e-2539.07Putative serine carboxypeptidase-like 53 OS=Arabid... [more]
SCPL1_DICDI2.822e-2441.22Serine carboxypeptidase S10 family member 1 OS=Dic... [more]
SCP39_ARATH8.212e-2439.47Serine carboxypeptidase-like 39 OS=Arabidopsis tha... [more]
SCP34_ARATH1.072e-2340.67Serine carboxypeptidase-like 34 OS=Arabidopsis tha... [more]
SCP36_ARATH2.642e-2234.67Serine carboxypeptidase-like 36 OS=Arabidopsis tha... [more]
YUW5_CAEEL7.686e-2236.88Uncharacterized serine carboxypeptidase F41C3.5 OS... [more]
YUA6_CAEEL7.686e-2239.19Uncharacterized serine carboxypeptidase F13S12.6 O... [more]

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Properties
Property NameValue
Genbank descriptionC32004D01EF DevOvary1 Citrus clementina cDNA clone C32004D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876402 ID=FC876402; Name=FC876402; organism=Citrus clementina; type=EST; length=593bp
GATCGCAATTCCATTAACACTGTTCTCCTCTCAATTATTGAGCGTAGCTA
AACCTGAAAGTGGATCTTCAAATCATTGAGCATGGCAGCATTGCAATTAT
TTTTTCTCTTTGTGGCCCTTAATGTGGTCCTCAGTTCATCACGGCAAATC
ATCACGACCCTGCCGGGCTTTGATGGTGATCTTCCCTTCAAACTCGAAAC
TGGGTATATTGGGGTGGGAGAGAATGATAATGTGCAGCTGTTTTACTACT
TCATTGAATCCGAGCGGAGTCCTGAAGATGACCCTCTTGTGCTTTGGCTC
TCCGGAGGCCCTGGTTGCTCTGGATTTTGGGCCCTTGCGTATCAACTTGG
TCCATTGTCATTTGACTACGAAAATTCTAGAGAAAATTCCCCAAAGTTGT
TGTTGAATCCATACTCATGGACAAAGGTTGCCAGTATTATATTCATAGAT
GCACCAGCTGGCACCGGATTCTCATATGTCAAAAATTGGCAAGGATTCGT
TATGAATGATACACTTTCAGCAGTGCAAACGTATTTTTTTCTAAGAAAGT
GGCTTATAGCTCATCCCAGTTTCCTCGCGAATCCACTCTATAT
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