FC876402

Overview
NameFC876402
Unique NameFC876402
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length593
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10349 contig Ccv1_Contig10349:1..593. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP30_ARATH (Putative serine carboxypeptidase-like 30 OS=Arabidopsis thaliana GN=SCPL30 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 7.686e-22
Identity = 53/150 (35.33%), Postives = 81/150 (54.00%), Query Frame = 1
Query:  148 IITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGF-WALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFV-MNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            ++T LPG   D+ FK   GY+ V +++   LFY+F E+   P++ PLVLWL+GGPGCS   +    ++GP   D      N   L+ NPY+W K  +++F+++P G GFSY      ++ ++D  +    Y FL  W    P    N  Y
Sbjct:   44 LVTNLPG-QPDVSFKHYAGYVPVDKSNGRALFYWFFEAMDLPKEKPLVLWLNGGPGCSSVGYGATQEIGPFLAD-----TNEKGLIFNPYAWNKEVNMLFLESPVGVGFSYSNTSSDYLNLDDHFAKKDAYTFLCNWFEKFPEHKGNEFY 187          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP44_ARATH (Serine carboxypeptidase-like 44 OS=Arabidopsis thaliana GN=SCPL44 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.004e-21
Identity = 53/151 (35.10%), Postives = 81/151 (53.64%), Query Frame = 1
Query:  142 RQIITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAY-QLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            + ++T LPG   ++ F+   GY+ +       LFYYF+E+E+ P   PL LWL+GGPGCS     A+ +LGP    Y     ++  L  NP SW K ++++F+D+PAG G+SY      +   D  +A     F+ +WL   P F    L+
Sbjct:   35 QDLVTKLPG-QPEVAFRQFAGYVDIDVKAGRSLFYYFVEAEKQPHSKPLTLWLNGGPGCSSIGGGAFTELGPF---YPTG--DARGLRRNPKSWNKASNLLFVDSPAGVGWSYSNTTSDYTTGDESTAKDMLVFMLRWLEKFPQFKTRNLF 179          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP26_ARATH (Serine carboxypeptidase-like 26 OS=Arabidopsis thaliana GN=SCPL26 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.311e-21
Identity = 58/148 (39.19%), Postives = 78/148 (52.70%), Query Frame = 1
Query:  160 LPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERS--PEDDPLVLWLSGGPGCSGF-WALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQG-FVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            LPG   D+ F   +GYI V E+    LFY+  ES  S  PE  PLVLWL+GGPGCS   +  A ++GP   + +        L  NPYSW K+A+++F+++PAG GFSY       +   D  +A   Y FL KW    P +     Y
Sbjct:   33 LPGEPNDVSFSHFSGYITVNESAGRALFYWLTESPPSENPESKPLVLWLNGGPGCSSVAYGAAEEIGPFRINPDGKT-----LYHNPYSWNKLANLLFLESPAGVGFSYSNTTSDLYTAGDQRTAEDAYVFLVKWFERFPQYKHREFY 175          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP31_ARATH (Serine carboxypeptidase-like 31 OS=Arabidopsis thaliana GN=SCPL31 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.712e-21
Identity = 54/152 (35.53%), Postives = 81/152 (53.29%), Query Frame = 1
Query:  142 RQIITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGF-WALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGF-VMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            + ++T LPG   D+ F+   GY+ V E++   +FY+F E+   P++ PLVLWL+GGPGCS   +    ++GP   D      N   L  NPY+W K A+++F+++P G GFSY      +  + D  +A   Y FL  W    P    N  Y
Sbjct:   48 QDLVTGLPG-QPDVSFRHYAGYVPVDESNGRAMFYWFFEAMDLPKEKPLVLWLNGGPGCSSVGYGATQEIGPFLVD-----TNGNGLNFNPYAWNKEANMLFLESPVGVGFSYSNTSSDYQKLGDDFTARDAYTFLCNWFEKFPEHKENTFY 193          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: NF314_NAEFO (Virulence-related protein Nf314 OS=Naegleria fowleri PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.712e-21
Identity = 53/149 (35.57%), Postives = 79/149 (53.02%), Query Frame = 1
Query:  148 IITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFV-MNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            ++T LPG  G++  K  TGY+         LFY+F ES R+P  DPLV+W +GGPGCS     A + G    + + +      +  NPYSW +V++I++I+ P G GFSY  +   +  +ND  +A      LR +L   P F+    Y
Sbjct:   15 LVTQLPGLSGNIGVKSYTGYLLANATRGRYLFYWFFESMRNPSQDPLVMWTNGGPGCSSLGGEASEHGLFLVNADGA-----TITRNPYSWNRVSNILYIEQPVGVGFSYSNSTDDYQNLNDVQAASDMNNALRDFLTRFPQFIGRETY 158          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP32_ARATH (Serine carboxypeptidase-like 32 OS=Arabidopsis thaliana GN=SCPL32 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.236e-21
Identity = 53/146 (36.30%), Postives = 80/146 (54.79%), Query Frame = 1
Query:  142 RQIITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGF-WALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGF-VMNDTLSAVQTYFFLRKWLIAHPSF 573
            R ++T  PG    + F+   GY+ V       LFY+F E+   P   PLVLWL+GGPGCS   +    ++GP   D + +      L  NPY+W K A+I+F+++PAG GFSY      +  + D  +A  +Y FL+KW +  P++
Sbjct:   29 RDLVTNFPG-QPKVSFRHYAGYVTVNIISGRALFYWFFEAMTHPNVKPLVLWLNGGPGCSSVGYGATQEIGPFLVDNKGN-----SLKFNPYAWNKEANILFLESPAGVGFSYSNTSSDYRKLGDDFTARDSYTFLQKWFLRFPAY 168          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP35_ARATH (Serine carboxypeptidase-like 35 OS=Arabidopsis thaliana GN=SCPL35 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.814e-21
Identity = 56/151 (37.09%), Postives = 83/151 (54.97%), Query Frame = 1
Query:  148 IITTLPGFDGDLPFKLETGYIGVG-ENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGF-WALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGF-VMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            ++T LPG    + FK   GY+ +G E     LFY+F E++++    PLVLWL+GGPGCS   +  A +LGP         +N  KL  N +SW K A+++F++AP G GFSY  N      + D ++A  +  FL  W +  P F ++  Y
Sbjct:   39 LVTGLPG-QPPVNFKHYAGYVNLGPEQKQKALFYWFFEAQQNSSRRPLVLWLNGGPGCSSIAYGAAQELGPFLV-----HDNGGKLTYNHFSWNKEANMLFLEAPVGVGFSYTNNSMDLQKLGDEVTASDSLAFLINWFMKFPEFRSSEFY 183          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.814e-21
Identity = 52/149 (34.90%), Postives = 78/149 (52.35%), Query Frame = 1
Query:  151 ITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGF-WALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMN-DTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            +  +PG   D  F    GY+ V E+    LFY+F E+   P   PL+LWL+GGPGCS   + +  ++GP   + +    +     +NPYSW +VA+I+F+D+P G G+SY       + N D  +A  +  FL KWL   P +     Y
Sbjct:    1 VPRVPGQAFDASFAHYAGYVTVSEDRGAALFYWFFEAAHDPASKPLLLWLNGGPGCSSIAFGVGEEVGPFHVNADGKGVH-----MNPYSWNQVANILFLDSPVGVGYSYSNTSADILSNGDERTAKDSLVFLTKWLERFPQYKEREFY 144          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: HNLS_SORBI (P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicolor PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 8.498e-21
Identity = 58/149 (38.93%), Postives = 76/149 (51.01%), Query Frame = 1
Query:  151 ITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERS-PEDDPLVLWLSGGPGCSGFWALAYQ-LGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            I  LPG    + F +  GY+ + +N+   L+Y+F E++ + P   PLVLWL+GGPGCS     A Q LGP          N   LLLN Y+W K A+I+F ++PAG  FSY        M D   A  TY FL KW    P +     Y
Sbjct:   65 IPGLPGQPNGVAFGMYGGYVTIDDNNGRALYYWFQEADTADPAAAPLVLWLNGGPGCSSIGLGAMQELGPFRV-----HTNGESLLLNEYAWNKAANILFAESPAGVVFSYSNTSSDLSMGDDKMAQDTYTFLVKWFERFPHYNYREFY 208          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP45_ARATH (Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana GN=SCPL45 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.110e-20
Identity = 54/151 (35.76%), Postives = 85/151 (56.29%), Query Frame = 1
Query:  151 ITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAY-QLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSY---VKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            +T LPG    + F+  +GY+ V +     LFYYF E+E +P   PLVLWL+GGPGCS     A+ + GP        R   P L+ N +SW + A++++++ P G GFSY     +++G  +ND ++A     FL++W +  P +L   L+
Sbjct:   32 VTRLPG-QPRVGFQQYSGYVTVDDKKQRALFYYFAEAETNPSSKPLVLWLNGGPGCSSLGVGAFSENGPF-------RPKGPILVKNQHSWNQEANMLYLETPVGVGFSYSTQSSHYEG--VNDKITARDNLVFLQRWFLKFPHYLNRSLF 172          
The following BLAST results are available for this feature:
BLAST of FC876402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
SCP30_ARATH7.686e-2235.33Putative serine carboxypeptidase-like 30 OS=Arabid... [more]
SCP44_ARATH1.004e-2135.10Serine carboxypeptidase-like 44 OS=Arabidopsis tha... [more]
SCP26_ARATH1.311e-2139.19Serine carboxypeptidase-like 26 OS=Arabidopsis tha... [more]
SCP31_ARATH1.712e-2135.53Serine carboxypeptidase-like 31 OS=Arabidopsis tha... [more]
NF314_NAEFO1.712e-2135.57Virulence-related protein Nf314 OS=Naegleria fowle... [more]
SCP32_ARATH2.236e-2136.30Serine carboxypeptidase-like 32 OS=Arabidopsis tha... [more]
SCP35_ARATH3.814e-2137.09Serine carboxypeptidase-like 35 OS=Arabidopsis tha... [more]
CBP22_HORVU3.814e-2134.90Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
HNLS_SORBI8.498e-2138.93P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicol... [more]
SCP45_ARATH1.110e-2035.76Serine carboxypeptidase-like 45 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC32004D01EF DevOvary1 Citrus clementina cDNA clone C32004D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876402 ID=FC876402; Name=FC876402; organism=Citrus clementina; type=EST; length=593bp
GATCGCAATTCCATTAACACTGTTCTCCTCTCAATTATTGAGCGTAGCTA
AACCTGAAAGTGGATCTTCAAATCATTGAGCATGGCAGCATTGCAATTAT
TTTTTCTCTTTGTGGCCCTTAATGTGGTCCTCAGTTCATCACGGCAAATC
ATCACGACCCTGCCGGGCTTTGATGGTGATCTTCCCTTCAAACTCGAAAC
TGGGTATATTGGGGTGGGAGAGAATGATAATGTGCAGCTGTTTTACTACT
TCATTGAATCCGAGCGGAGTCCTGAAGATGACCCTCTTGTGCTTTGGCTC
TCCGGAGGCCCTGGTTGCTCTGGATTTTGGGCCCTTGCGTATCAACTTGG
TCCATTGTCATTTGACTACGAAAATTCTAGAGAAAATTCCCCAAAGTTGT
TGTTGAATCCATACTCATGGACAAAGGTTGCCAGTATTATATTCATAGAT
GCACCAGCTGGCACCGGATTCTCATATGTCAAAAATTGGCAAGGATTCGT
TATGAATGATACACTTTCAGCAGTGCAAACGTATTTTTTTCTAAGAAAGT
GGCTTATAGCTCATCCCAGTTTCCTCGCGAATCCACTCTATAT
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