FC876402

Overview
NameFC876402
Unique NameFC876402
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length593
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10349 contig Ccv1_Contig10349:1..593. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP40_ARATH (Serine carboxypeptidase-like 40 OS=Arabidopsis thaliana GN=SCPL40 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.449e-20
Identity = 53/152 (34.87%), Postives = 76/152 (50.00%), Query Frame = 1
Query:  142 RQIITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGF-WALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMN-DTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            R +I  LPG    + F    GY+ V E+     FYYF+E+ +S +  PL+LWL+GGPGCS   +    +LGP          +   L  N Y+W   A+++F+++PAG GFSY         + D  +A   Y FL  WL   P +    LY
Sbjct:   79 RDLIRRLPG-QPPVSFDQYGGYVTVNESAGRSFFYYFVEASKSKDSSPLLLWLNGGPGCSSLAYGALQELGPF-----RVHSDGKTLFRNRYAWNNAANVLFLESPAGVGFSYTNTTSDLEKHGDRNTAADNYIFLVNWLERFPEYKGRDLY 224          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: CBP3_HORVU (Serine carboxypeptidase 3 OS=Hordeum vulgare GN=CBP3 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.449e-20
Identity = 52/146 (35.62%), Postives = 82/146 (56.16%), Query Frame = 1
Query:  157 TLPGF-DGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            TLPG  +G        GY  +    + ++FY+F ES R  ++DP+V+WL+GGPGCS   A+ Y+ GP +        N+  L+ N + W K+++IIF+D P GTGFSY  + +    ++T  +   Y FL+ +   HP F+ N  +
Sbjct:   80 TLPGLPEGVADLGHHAGYYRLPNTHDARMFYFFFES-RGKKEDPVVIWLTGGPGCSSELAVFYENGPFTI------ANNMSLVWNKFGWDKISNIIFVDQPTGTGFSYSSDDRDTRHDETGVSNDLYDFLQVFFKKHPEFIKNDFF 218          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP46_ARATH (Serine carboxypeptidase-like 46 OS=Arabidopsis thaliana GN=SCPL46 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.508e-20
Identity = 53/149 (35.57%), Postives = 79/149 (53.02%), Query Frame = 1
Query:  151 ITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAY-QLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFV-MNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            IT LPG    + F+  +GY+ + E     LFYY  E+E  P   PLVLWL+GGPGCS     A+ + GP        R     L+ N +SW + A++++++ P G GFSY      +  +ND ++A     FL+KW +  P +L   L+
Sbjct:   34 ITRLPG-QPRVGFQQYSGYVTIDEKKQRALFYYLAEAETKPISKPLVLWLNGGPGCSSLGVGAFSENGPF-------RPKGSILVRNQHSWNQEANMLYLETPVGVGFSYANESSSYEGVNDKITAKDNLVFLQKWFLKFPQYLNRSLF 174          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP37_ARATH (Serine carboxypeptidase-like 37 OS=Arabidopsis thaliana GN=SCPL37 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 5.508e-20
Identity = 51/154 (33.12%), Postives = 74/154 (48.05%), Query Frame = 1
Query:  142 RQIITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKN----WQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            + +I  LPG    + F+   GY+ V E  +  L+YYF+E+ +     PLV+W +GGP CS       +LGP             KL  NPYSW   A+++F+++P  TGFSY  N     +     D  +A   Y FL  WL   P +    +Y
Sbjct:   62 KDLIKKLPGQPSGVSFRQYGGYVPVNEPSSRFLYYYFVEAIKPNTSTPLVIWFNGGPACSSLGGAFLELGPF-----RVHSGGRKLFRNPYSWNNEANVLFLESPVTTGFSYSSNPIDLEELGEKGDKATAEDNYIFLMNWLERFPEYKGRDIY 210          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP38_ARATH (Serine carboxypeptidase-like 38 OS=Arabidopsis thaliana GN=SCPL38 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 7.194e-20
Identity = 56/156 (35.90%), Postives = 78/156 (50.00%), Query Frame = 1
Query:  142 RQIITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCS--GFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVK---NWQGF-VMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            + +I  LPG    + F+   GY+ V E     L+YYF+E+ +  +  PLVLW +GGPGCS  GF A   +LGP          +   L  NPYSW   A+++F + P   GFSY     +W+ F    D L+A   Y FL  WL   P +    +Y
Sbjct:   61 KDLIEKLPGQPSGISFRQYGGYVAVNEPATRFLYYYFVEAIKPSKSTPLVLWFNGGPGCSSVGFGAFE-ELGPF-----RVHSDGKTLYRNPYSWNNEANMLFFEGPISVGFSYSSTPFDWEIFGEQADKLTAEDNYMFLVNWLERFPEYKGRDVY 210          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: YPP3_CAEEL (Uncharacterized serine carboxypeptidase F32A5.3 OS=Caenorhabditis elegans GN=F32A5.3 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.227e-19
Identity = 50/152 (32.89%), Postives = 77/152 (50.66%), Query Frame = 1
Query:  142 RQIITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQG-FVMNDTLSAVQTYFFLRKWL-IAHPSFLANPLY 591
            + +I  LPG      FK  +GY+    N   ++ Y   ES  +P+ DPL++W +GGPGCS    L  +LGP   +++        L  NPY+W   A+++++++P G G+SY     G F  ND  SA Q Y  L  +  +A P +     Y
Sbjct:   21 KDLIQNLPGLLFKANFKSYSGYVDANANGTWKMHYMLTESRSNPDTDPLLVWFNGGPGCSSLGGLFEELGPFYVNFDGQ-----TLYENPYAWNAKANVLYLESPIGVGYSYDTTTPGYFQANDDQSAAQNYQALTNFFNVAQPKYTNRTFY 167          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.227e-19
Identity = 55/154 (35.71%), Postives = 82/154 (53.25%), Query Frame = 1
Query:  142 RQIITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESE--RSPEDDPLVLWLSGGPGCSGF-WALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQG-FVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            R  I+ LPG   ++ F+  +GY+ V E     LFY+ +ES   R P+  PLVLWL+GGPGCS   +  A ++GP     +    +S KL    Y+W K+A+++F+++PAG GFSY       +   D  +A  +Y FL  W    P +     Y
Sbjct:   31 RDRISNLPGQPSNVDFRQYSGYVTVHEERGRALFYWLVESPLARDPKSRPLVLWLNGGPGCSSVAYGAAEEIGPFRVGSDGKTLHS-KL----YAWNKLANLLFLESPAGVGFSYSNTTSDLYTTGDQRTAEDSYIFLVNWFERFPQYKHREFY 179          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: PPGB_MOUSE (Lysosomal protective protein OS=Mus musculus GN=Ctsa PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.093e-19
Identity = 51/147 (34.69%), Postives = 81/147 (55.10%), Query Frame = 1
Query:  151 ITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            I  LPG      F+  +GY+    +D+    Y+F+ES+  P++ P+VLWL+GGPGCS    L  + GP        + +   L  NPY+W  +A++++I++PAG GFSY  + + +V NDT  A   Y  L+ +    P +  N L+
Sbjct:   30 IDCLPGLAKQPSFRQYSGYLRA--SDSKHFHYWFVESQNDPKNSPVVLWLNGGPGCSSLDGLLTEHGPFLI-----QPDGVTLEYNPYAWNLIANVLYIESPAGVGFSYSDD-KMYVTNDTEVAENNYEALKDFFRLFPEYKDNKLF 168          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP41_ARATH (Serine carboxypeptidase-like 41 OS=Arabidopsis thaliana GN=SCPL41 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.734e-19
Identity = 51/149 (34.23%), Postives = 78/149 (52.35%), Query Frame = 1
Query:  148 IITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAY-QLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            ++  LPG    + F+   GY+ +  N    LFYYF+E+E+ P+  PL LWL+GGPGCS     A+ +LGP    Y         L +N  SW K ++++F+D+PAG G+SY      +   D  +A     FL +W    P   ++ L+
Sbjct:   28 LVVRLPG-QPKVVFRQYAGYVDLDLNAGRSLFYYFVEAEKHPDTKPLTLWLNGGPGCSSVGGGAFTELGPF---YPTGYGRG--LRINSMSWNKASNLLFVDSPAGVGWSYSNRSSDYNAGDKSAASDMLVFLLRWFDKFPELKSHDLF 170          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: CBPY_SCHPO (Carboxypeptidase Y OS=Schizosaccharomyces pombe GN=cpy1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.734e-19
Identity = 51/128 (39.84%), Postives = 69/128 (53.91%), Query Frame = 1
Query:  190 KLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSF 573
            K  TGY+ V   D+  LF++F ES   PE+DP+VLWL+GGPGCS    L  +LGP S + E  +        NP+SW   AS+IF+D P  TGFS   N    V++   +    Y FL  +    P +
Sbjct:  587 KQYTGYLDV--EDDRHLFFWFFESRNDPENDPVVLWLNGGPGCSSLTGLFMELGPSSINIETLKPE-----YNPHSWNSNASVIFLDQPINTGFS---NGDDSVLDTVTAGKDVYAFLNLFFAKFPQY 704          
The following BLAST results are available for this feature:
BLAST of FC876402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
SCP40_ARATH1.449e-2034.87Serine carboxypeptidase-like 40 OS=Arabidopsis tha... [more]
CBP3_HORVU1.449e-2035.62Serine carboxypeptidase 3 OS=Hordeum vulgare GN=CB... [more]
SCP46_ARATH5.508e-2035.57Serine carboxypeptidase-like 46 OS=Arabidopsis tha... [more]
SCP37_ARATH5.508e-2033.12Serine carboxypeptidase-like 37 OS=Arabidopsis tha... [more]
SCP38_ARATH7.194e-2035.90Serine carboxypeptidase-like 38 OS=Arabidopsis tha... [more]
YPP3_CAEEL1.227e-1932.89Uncharacterized serine carboxypeptidase F32A5.3 OS... [more]
SCP27_ARATH1.227e-1935.71Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
PPGB_MOUSE2.093e-1934.69Lysosomal protective protein OS=Mus musculus GN=Ct... [more]
SCP41_ARATH2.734e-1934.23Serine carboxypeptidase-like 41 OS=Arabidopsis tha... [more]
CBPY_SCHPO2.734e-1939.84Carboxypeptidase Y OS=Schizosaccharomyces pombe GN... [more]

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Properties
Property NameValue
Genbank descriptionC32004D01EF DevOvary1 Citrus clementina cDNA clone C32004D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876402 ID=FC876402; Name=FC876402; organism=Citrus clementina; type=EST; length=593bp
GATCGCAATTCCATTAACACTGTTCTCCTCTCAATTATTGAGCGTAGCTA
AACCTGAAAGTGGATCTTCAAATCATTGAGCATGGCAGCATTGCAATTAT
TTTTTCTCTTTGTGGCCCTTAATGTGGTCCTCAGTTCATCACGGCAAATC
ATCACGACCCTGCCGGGCTTTGATGGTGATCTTCCCTTCAAACTCGAAAC
TGGGTATATTGGGGTGGGAGAGAATGATAATGTGCAGCTGTTTTACTACT
TCATTGAATCCGAGCGGAGTCCTGAAGATGACCCTCTTGTGCTTTGGCTC
TCCGGAGGCCCTGGTTGCTCTGGATTTTGGGCCCTTGCGTATCAACTTGG
TCCATTGTCATTTGACTACGAAAATTCTAGAGAAAATTCCCCAAAGTTGT
TGTTGAATCCATACTCATGGACAAAGGTTGCCAGTATTATATTCATAGAT
GCACCAGCTGGCACCGGATTCTCATATGTCAAAAATTGGCAAGGATTCGT
TATGAATGATACACTTTCAGCAGTGCAAACGTATTTTTTTCTAAGAAAGT
GGCTTATAGCTCATCCCAGTTTCCTCGCGAATCCACTCTATAT
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