FC876402

Overview
NameFC876402
Unique NameFC876402
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length593
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10349 contig Ccv1_Contig10349:1..593. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP48_ARATH (Serine carboxypeptidase-like 48 OS=Arabidopsis thaliana GN=SCPL48 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.357e-18
Identity = 47/135 (34.81%), Postives = 73/135 (54.07%), Query Frame = 1
Query:  187 FKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            F    GY  +  +   ++FY+F ES R+ + DP+V+WL+GGPGCS   AL Y+ GP +        N+  L  N + W K +++I++D P GTGFSY  +      ++   +   Y FL+ +   HP F+ N  Y
Sbjct:   99 FGHHAGYYKLPNSKAARMFYFFFES-RTNKADPVVIWLTGGPGCSSELALFYENGPFTVS------NNSSLSWNEFGWDKASNLIYVDQPVGTGFSYTSDQSDLRHDEDGVSNDLYDFLQAFFKEHPQFVKNDFY 226          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: CBP2_WHEAT (Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.357e-18
Identity = 54/149 (36.24%), Postives = 74/149 (49.66%), Query Frame = 1
Query:  151 ITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGF-WALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQG-FVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            I  LPG    + F + +GYI V E     LFY   E+    +  PLVLWL+GGPGCS   +  + +LG         +     L+LN Y W KVA+++F+D+PAG GFSY       +   D  +A  +Y FL KW    P +     Y
Sbjct:   11 IARLPGQPA-VDFDMYSGYITVDEGAGRSLFYLLQEAPEDAQPAPLVLWLNGGPGCSSVAYGASEELGAF-----RVKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFY 153          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP47_ARATH (Serine carboxypeptidase-like 47 OS=Arabidopsis thaliana GN=SCPL47 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.772e-18
Identity = 46/130 (35.38%), Postives = 72/130 (55.38%), Query Frame = 1
Query:  202 GYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            GY  +  + + ++FY+F ES R+   DP+V+WL+GGPGCS   A+ Y+ GP     + S      L  N + W KV++II++D P GTGFSY  +      ++   +   Y FL+ +   HP F+ N  +
Sbjct:  101 GYYSLPHSKSAKMFYFFFES-RNKTTDPVVIWLTGGPGCSSSVAMFYENGPFKISKDLS------LYWNDFGWDKVSNIIYVDQPVGTGFSYTSDESDIRNDEDGVSNDLYDFLQAFFKEHPKFVKNDFF 223          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.772e-18
Identity = 50/149 (33.56%), Postives = 77/149 (51.68%), Query Frame = 1
Query:  151 ITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGF-WALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMN-DTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            ++ LPG + ++ F   +G++   E     LFY+  E+    +  PLVLWL+GGPGCS   +  A ++GP      + + +   L LN YSW + A+I+F+DAP G G+SY         N D  +A  +  FL KW+   P +     Y
Sbjct:   38 VSKLPGQNFNVSFAHYSGFVATNEQLGRALFYWLFEAVEDAKSKPLVLWLNGGPGCSSVAYGEAEEIGPF-----HIKADGKTLYLNQYSWNQAANILFLDAPVGVGYSYSNTSSDLKSNGDKRTAEDSLKFLLKWVERFPEYKGRDFY 181          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP33_ARATH (Serine carboxypeptidase-like 33 OS=Arabidopsis thaliana GN=SCPL33 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.022e-18
Identity = 47/134 (35.07%), Postives = 71/134 (52.99%), Query Frame = 1
Query:  199 TGYIGVGENDNVQLFYYFIES-ERSPEDDPLVLWLSGGPGCSGF-WALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFV-MNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            +GY+ V + +   LF++F E+   SP   PLVLWL+GGPGCS   +  A +LGP         EN   L  N YSW + A+++F+++P G GFSY  +      +ND   A   Y F+  W   +P + +   +
Sbjct:   49 SGYVNVNQENTRSLFFWFFEALSESPSTRPLVLWLNGGPGCSSIGYGAASELGPF-----RVVENGTSLSFNQYSWVQEANMLFLESPVGVGFSYTNSSSDLENLNDAFVAEDAYNFMVAWFARYPQYKSRDFF 177          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP43_ARATH (Serine carboxypeptidase-like 43 OS=Arabidopsis thaliana GN=SCPL43 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.733e-18
Identity = 48/149 (32.21%), Postives = 77/149 (51.68%), Query Frame = 1
Query:  148 IITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAY-QLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            ++  LPG   ++ F+   GY+ V   +   LFYY++E+ + P+  PL LWL+GGPGCS     A+ +LGP    Y     +   L LN  SW K ++++F+++PAG G+SY      +   D  +      FL +W    P   +  L+
Sbjct:   31 LVARLPG-QPNVGFRQFAGYVDVDSENGRSLFYYYVEAVKEPDTKPLTLWLNGGPGCSSVGGGAFTELGPF---YPTG--DGRGLRLNSMSWNKASNLLFVESPAGVGWSYSNRSSDYNTGDKSTVNDMLVFLLRWFNKFPELKSRDLF 173          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: YSS2_CAEEL (Uncharacterized serine carboxypeptidase K10B2.2 OS=Caenorhabditis elegans GN=K10B2.2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.794e-18
Identity = 52/142 (36.62%), Postives = 76/142 (53.52%), Query Frame = 1
Query:  151 ITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSF-DYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSF 573
            +  LPG      F   +GY+    +    L Y+  ES R+P  DPLVLWL+GGPGCS    L  +LGP    D+ NS      +  N Y+W K A+++F+++PAG G+SY  N+   V +D +S +  Y  L  +L   P +
Sbjct:   26 VNDLPGLTFTPDFFHYSGYLRAWTDK--YLHYWLTESSRAPTQDPLVLWLNGGPGCSSLDGLIEELGPFHVKDFGNS------IYYNEYAWNKFANVLFLESPAGVGYSYSTNFNLTVSDDEVS-LHNYMALLDFLSKFPEY 158          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: CBP2_HORVU (Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CBP2 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 8.794e-18
Identity = 53/149 (35.57%), Postives = 73/149 (48.99%), Query Frame = 1
Query:  151 ITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGF-WALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQG-FVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            I  LPG   ++ F + +GYI V E     LFY   E+    +  PLVLWL+GGPGCS   +  + +LG               L+LN Y W KVA+++F+D+PAG GFSY       +   D  +A  +Y FL  W    P +     Y
Sbjct:   43 IVRLPG-QPEVDFDMYSGYITVDEAAGRSLFYLLQEAPEEAQPAPLVLWLNGGPGCSSVAYGASEELGAF-----RVMPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAAWFERFPHYKYREFY 185          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP49_ARATH (Serine carboxypeptidase-like 49 OS=Arabidopsis thaliana GN=SCPL49 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.148e-17
Identity = 45/130 (34.62%), Postives = 70/130 (53.85%), Query Frame = 1
Query:  202 GYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            GY  + ++    +FY+F ES R+ +D P+V+WL+GGPGCS   A+ Y+ GP       S      L  N Y W +V++++++D P GTGFSY  +      ++T  +   Y FL+ +   HP    N  Y
Sbjct:  102 GYYKLPKSRGASMFYFFFES-RNKKDAPVVIWLTGGPGCSSELAVFYENGPFKITSNMS------LAWNEYGWDQVSNLLYVDQPVGTGFSYTTDKSDIRHDETGVSNDLYDFLQAFFAEHPKLAKNDFY 224          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP42_ARATH (Serine carboxypeptidase-like 42 OS=Arabidopsis thaliana GN=SCPL42 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.148e-17
Identity = 49/149 (32.89%), Postives = 75/149 (50.34%), Query Frame = 1
Query:  148 IITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAY-QLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            ++  LPG    + FK   GY+ V       LFYY++E+ + P+  PL LWL+GGPGCS     A+ +LGP    Y     +   L +N  SW K + ++F+++PAG G+SY      +   D  +A     FL +W    P   +  L+
Sbjct:   32 LVVRLPG-QPTVGFKQYAGYVDVDVKAGRSLFYYYVEAVKQPDSKPLTLWLNGGPGCSSIGGGAFTELGPF---YPTG--DGRGLRVNSMSWNKASHLLFVESPAGVGWSYSNKSSDYNTGDKSTANDMLVFLLRWFEKFPKLKSRDLF 174          
The following BLAST results are available for this feature:
BLAST of FC876402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
SCP48_ARATH1.357e-1834.81Serine carboxypeptidase-like 48 OS=Arabidopsis tha... [more]
CBP2_WHEAT1.357e-1836.24Serine carboxypeptidase 2 OS=Triticum aestivum GN=... [more]
SCP47_ARATH1.772e-1835.38Serine carboxypeptidase-like 47 OS=Arabidopsis tha... [more]
SCP29_ARATH1.772e-1833.56Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
SCP33_ARATH3.022e-1835.07Serine carboxypeptidase-like 33 OS=Arabidopsis tha... [more]
SCP43_ARATH6.733e-1832.21Serine carboxypeptidase-like 43 OS=Arabidopsis tha... [more]
YSS2_CAEEL8.794e-1836.62Uncharacterized serine carboxypeptidase K10B2.2 OS... [more]
CBP2_HORVU8.794e-1835.57Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CB... [more]
SCP49_ARATH1.148e-1734.62Serine carboxypeptidase-like 49 OS=Arabidopsis tha... [more]
SCP42_ARATH1.148e-1732.89Serine carboxypeptidase-like 42 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC32004D01EF DevOvary1 Citrus clementina cDNA clone C32004D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876402 ID=FC876402; Name=FC876402; organism=Citrus clementina; type=EST; length=593bp
GATCGCAATTCCATTAACACTGTTCTCCTCTCAATTATTGAGCGTAGCTA
AACCTGAAAGTGGATCTTCAAATCATTGAGCATGGCAGCATTGCAATTAT
TTTTTCTCTTTGTGGCCCTTAATGTGGTCCTCAGTTCATCACGGCAAATC
ATCACGACCCTGCCGGGCTTTGATGGTGATCTTCCCTTCAAACTCGAAAC
TGGGTATATTGGGGTGGGAGAGAATGATAATGTGCAGCTGTTTTACTACT
TCATTGAATCCGAGCGGAGTCCTGAAGATGACCCTCTTGTGCTTTGGCTC
TCCGGAGGCCCTGGTTGCTCTGGATTTTGGGCCCTTGCGTATCAACTTGG
TCCATTGTCATTTGACTACGAAAATTCTAGAGAAAATTCCCCAAAGTTGT
TGTTGAATCCATACTCATGGACAAAGGTTGCCAGTATTATATTCATAGAT
GCACCAGCTGGCACCGGATTCTCATATGTCAAAAATTGGCAAGGATTCGT
TATGAATGATACACTTTCAGCAGTGCAAACGTATTTTTTTCTAAGAAAGT
GGCTTATAGCTCATCCCAGTTTCCTCGCGAATCCACTCTATAT
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