FC876402

Overview
NameFC876402
Unique NameFC876402
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length593
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10349 contig Ccv1_Contig10349:1..593. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: CPVL_HUMAN (Probable serine carboxypeptidase CPVL OS=Homo sapiens GN=CPVL PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 5.335e-15
Identity = 44/137 (32.12%), Postives = 68/137 (49.64%), Query Frame = 1
Query:  181 LPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            L  K   G++ V +  N  LF++F  ++  PED P+VLWL GGPG S  + L  + GP          ++  L    + WT   S+++ID P GTGFS+  +  G+ +N+   A   Y  L ++    P +  N  Y
Sbjct:   69 LNMKSYAGFLTVNKTYNSNLFFWFFPAQIQPEDAPVVLWLQGGPGGSSMFGLFVEHGPYVV------TSNMTLRDRDFPWTTTLSMLYIDNPVGTGFSFTDDTHGYAVNEDDVARDLYSALIQFFQIFPEYKNNDFY 199          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: CPVL_PONAB (Probable serine carboxypeptidase CPVL OS=Pongo abelii GN=CPVL PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 6.968e-15
Identity = 42/130 (32.31%), Postives = 66/130 (50.77%), Query Frame = 1
Query:  202 GYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            G++ V +  N  LF++F  ++  PED P+VLWL GGPG S  + L  + GP          ++  L    + WT   S+++ID P GTGFS+  +  G+ +N+   A   Y  L ++    P +  N  Y
Sbjct:   76 GFLTVNKTYNSNLFFWFFPAQIQPEDAPVVLWLQGGPGFSSMFGLFVEHGPYVV------TSNMTLRDRDFPWTTTLSMLYIDNPVGTGFSFTDDTHGYAVNEDDVAQDLYSALIQFFQIFPEYKNNDFY 199          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: VCP_AEDAE (Vitellogenic carboxypeptidase OS=Aedes aegypti GN=VCP PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 5.898e-14
Identity = 36/131 (27.48%), Postives = 68/131 (51.91%), Query Frame = 1
Query:  199 TGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            +G++ V    N  LF++++ ++ + E  P+++WL GGPG S  + +  + GP       S +         YSW +   +I+ID P GTGFS+  + +G+  N+         F++++ +  P+ L +P Y
Sbjct:   78 SGFMTVDAKHNSNLFFWYVPAKNNREQAPILVWLQGGPGASSLFGMFEENGPFHIHRNKSVKQ------REYSWHQNHHMIYIDNPVGTGFSFTDSDEGYSTNEEHVGENLMKFIQQFFVLFPNLLKHPFY 202          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCP50_ARATH (Serine carboxypeptidase-like 50 OS=Arabidopsis thaliana GN=SCPL50 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.704e-14
Identity = 48/143 (33.57%), Postives = 68/143 (47.55%), Query Frame = 1
Query:  172 DGDLPFKLETGYIGVGENDNVQLFYYFIESERSPE---DDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHPSFLANPLY 591
            D  LP K  +GY+ V       +FY F E++       D PL++WL GGPGCS      Y+LGP           +  L  NP +W ++  ++F+D P G GFS   + Q    N    A   Y  L ++L  +PSF   P+Y
Sbjct:   30 DEALPTK--SGYLPVKPAPGSSMFYAFYEAQEPTTPLPDTPLLVWLQGGPGCSSMIGNFYELGPWRVV-----SRATDLERNPGAWNRLFGLLFVDNPIGVGFSIAASQQDIPTNQRQVAEHLYAALVEFLEQNPSFENRPVY 165          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: PEPS_ASPSA (Carboxypeptidase cpdS OS=Aspergillus saitoi GN=cpdS PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.241e-13
Identity = 40/110 (36.36%), Postives = 60/110 (54.55%), Query Frame = 1
Query:  154 TTLPGFDGDLPFKLETGYIGVGEND---NVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFS 474
            T++P  D    F +   Y G+  N    N  LF++F  S+     D + +WL+GGPGCS    L  + GP  +     +  + K + NPYSWT + ++++ID PAGTGFS
Sbjct:   65 TSIPEVD----FDVGESYAGLLPNTPTGNSSLFFWFFPSQNPDASDEITIWLNGGPGCSSLDGLLQENGPFLW-----QPGTYKPVPNPYSWTNLTNVVYIDQPAGTGFS 165          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: CPS1_PENJA (Carboxypeptidase S1 OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.927e-13
Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 1
Query:  199 TGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSY 477
            +GY+ VG N N  ++++F E+  +P+  PL  W +GGPGCS    L  + GP  F   +S  +     LN  SW   A++I+ID P G GFSY
Sbjct:   18 SGYLSVGSNMN--MWFWFFEARNNPQQAPLAAWFNGGPGCSSMIGLFQENGPCHFVNGDSTPS-----LNENSWNNYANMIYIDQPIGVGFSY 103          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SXA2_SCHPO (Carboxypeptidase sxa2 OS=Schizosaccharomyces pombe GN=sxa2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 39/108 (36.11%), Postives = 61/108 (56.48%), Query Frame = 1
Query:  151 ITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFS 474
            I +LP F G LP +L +GY+    N +  LFY +  +    + +  ++WL GGPGC+G      + GP+        ++SP   LNP SWT  A+++++D P GTG+S
Sbjct:   61 IKSLPEFKGSLP-ELYSGYLEA--NSDKSLFYTYAPAV--VDSETFIVWLQGGPGCAGTLGFFSENGPIEIS-----QSSPSPSLNPESWTNFANMLWLDQPFGTGYS 158          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SPCA_NANOT (Carboxypeptidase S1 homolog A OS=Nannizzia otae (strain CBS 113480) GN=SCPA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 36/104 (34.62%), Postives = 54/104 (51.92%), Query Frame = 1
Query:  169 FDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYE-NSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSY 477
            F G +         GV +N ++  F++F E+   P++ PL +WL+GGPG S    L  + GP   + + NS  N      NPYSW    ++++ID P   GFSY
Sbjct:   59 FTGHVHLPPNNNDFGVNQNYSINTFFWFFEAREDPKNAPLSIWLNGGPGSSSMIGLFQENGPCMVNNDSNSTTN------NPYSWNNKVNMLYIDQPNQVGFSY 156          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: KEX1_SCHPO (Carboxypeptidase kex1 OS=Schizosaccharomyces pombe GN=kex1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.230e-11
Identity = 39/140 (27.86%), Postives = 67/140 (47.86%), Query Frame = 1
Query:  148 IITTLPGFDGDLPFKLETGYIGVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSYVKNWQGFVMNDTLSAVQTYFFLRKWLIAHP 567
            ++   P    D   ++  G++   +  +  LF++  ES +   +   +LWL+GGPGCS       ++GP   D  N+ +      LNP  W ++ +++F+D P GTG+SY    + F  N+   A     F  K+L   P
Sbjct:   30 LVKAFPNEPVDYEGRMHAGHLNQTDQLDGDLFFWMFESVKPEYEHRSILWLNGGPGCSSEDGSLMEVGPFRLDDNNTFQ------LNPGRWDELGNLLFVDQPLGTGYSY-SLAKDFQSNNEKMANDFSIFFEKFLEEFP 162          
BLAST of FC876402 vs. ExPASy Swiss-Prot
Match: SCPB_TRIRU (Carboxypeptidase S1 homolog B OS=Trichophyton rubrum GN=SCPB PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.098e-11
Identity = 31/89 (34.83%), Postives = 53/89 (59.55%), Query Frame = 1
Query:  211 GVGENDNVQLFYYFIESERSPEDDPLVLWLSGGPGCSGFWALAYQLGPLSFDYENSRENSPKLLLNPYSWTKVASIIFIDAPAGTGFSY 477
            GV ++  +  F++F E+ + PE+ PL +W++GGPG S  + +  + GP    + N+  NS +  LNP+SW    ++++ID P   G SY
Sbjct:   75 GVEQDYPINTFFWFFEARKDPENAPLGIWMNGGPGSSSMFGMMTENGPC---FVNADSNSTR--LNPHSWNNEVNMLYIDQPVQVGLSY 158          
The following BLAST results are available for this feature:
BLAST of FC876402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
CPVL_HUMAN5.335e-1532.12Probable serine carboxypeptidase CPVL OS=Homo sapi... [more]
CPVL_PONAB6.968e-1532.31Probable serine carboxypeptidase CPVL OS=Pongo abe... [more]
VCP_AEDAE5.898e-1427.48Vitellogenic carboxypeptidase OS=Aedes aegypti GN=... [more]
SCP50_ARATH7.704e-1433.57Serine carboxypeptidase-like 50 OS=Arabidopsis tha... [more]
PEPS_ASPSA2.241e-1336.36Carboxypeptidase cpdS OS=Aspergillus saitoi GN=cpd... [more]
CPS1_PENJA2.927e-1339.78Carboxypeptidase S1 OS=Penicillium janthinellum PE... [more]
SXA2_SCHPO4.227e-1236.11Carboxypeptidase sxa2 OS=Schizosaccharomyces pombe... [more]
SPCA_NANOT4.227e-1234.62Carboxypeptidase S1 homolog A OS=Nannizzia otae (s... [more]
KEX1_SCHPO1.230e-1127.86Carboxypeptidase kex1 OS=Schizosaccharomyces pombe... [more]
SCPB_TRIRU2.098e-1134.83Carboxypeptidase S1 homolog B OS=Trichophyton rubr... [more]

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Properties
Property NameValue
Genbank descriptionC32004D01EF DevOvary1 Citrus clementina cDNA clone C32004D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876402 ID=FC876402; Name=FC876402; organism=Citrus clementina; type=EST; length=593bp
GATCGCAATTCCATTAACACTGTTCTCCTCTCAATTATTGAGCGTAGCTA
AACCTGAAAGTGGATCTTCAAATCATTGAGCATGGCAGCATTGCAATTAT
TTTTTCTCTTTGTGGCCCTTAATGTGGTCCTCAGTTCATCACGGCAAATC
ATCACGACCCTGCCGGGCTTTGATGGTGATCTTCCCTTCAAACTCGAAAC
TGGGTATATTGGGGTGGGAGAGAATGATAATGTGCAGCTGTTTTACTACT
TCATTGAATCCGAGCGGAGTCCTGAAGATGACCCTCTTGTGCTTTGGCTC
TCCGGAGGCCCTGGTTGCTCTGGATTTTGGGCCCTTGCGTATCAACTTGG
TCCATTGTCATTTGACTACGAAAATTCTAGAGAAAATTCCCCAAAGTTGT
TGTTGAATCCATACTCATGGACAAAGGTTGCCAGTATTATATTCATAGAT
GCACCAGCTGGCACCGGATTCTCATATGTCAAAAATTGGCAAGGATTCGT
TATGAATGATACACTTTCAGCAGTGCAAACGTATTTTTTTCTAAGAAAGT
GGCTTATAGCTCATCCCAGTTTCCTCGCGAATCCACTCTATAT
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