FC876404

Overview
NameFC876404
Unique NameFC876404
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length622
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10302 contig Ccv1_Contig10302:7..628. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876404 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.250e-21
Identity = 50/154 (32.47%), Postives = 82/154 (53.25%), Query Frame = 3
Query:  159 PGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLG 620
            P P   P++GNL  LG  PH+S+  L+  +GPLM L  G                LK HD  F++RP +   + + Y+  D+   PYG  WR ++ +  +HLFS K +  +R VR+EE++++   +  + + PVNL++ L     + + +V LG
Sbjct:   33 PSPPGLPLIGNLHQLGRHPHRSLCSLSHRYGPLMLLHFGRVPVLVVSSAELARDVLKTHDRVFASRPRSKIFEKLLYDKHDVASAPYGEYWRQMKSVCVLHLFSNKMVRSFREVREEEISLMMEKIRKSISLPVNLSKILVSLTNDVICKVALG 186          
BLAST of FC876404 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.208e-20
Identity = 57/159 (35.85%), Postives = 81/159 (50.94%), Query Frame = 3
Query:  156 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRP-PNSGAKHIAYNYQDIV--FRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGT--EPVNLAQRLNLCVVNALGRVML 617
            PP PK  PI+G+L  + P+PHQ    L+  HGP+M L LG              +FLK H+ NFSNRP  N   K +AY+ QD +  F P+GP W+ ++K+    L SG+ +D +  VRQ+E       +   G   E V+    L     N + R+ L
Sbjct:   30 PPSPKALPIIGHLHLVSPIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNRPGQNVAVKGLAYDSQDFLFAFAPFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQETKRFISRVFRKGVAGEAVDFGDELMTLSNNIVSRMTL 188          
BLAST of FC876404 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.208e-20
Identity = 51/156 (32.69%), Postives = 85/156 (54.49%), Query Frame = 3
Query:  159 PGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTE--PVNLAQRLNLCVVNALGRVMLG 620
            P P  +PI+GNL  +G +PHQ++  L++ +GP+M+L LG              Q L++HD +   RP  SG + ++YNY DI F PY   W+ +RK+    LFS K +   + ++ EE+  +  ++A + ++  PVNL  +     V+ + R   G
Sbjct:   32 PCPPGFPIIGNLHQIGELPHQTLWKLSKKYGPVMHLMLGRVPTVVVSSSDTARQVLRVHDLHCCTRPSLSGPRELSYNYLDIAFSPYDDYWKEVRKLCVQELFSTKQVHSIQPIKDEEVKKMIDSIAESASQKNPVNLNNKCLELTVSVVCRTAFG 187          
BLAST of FC876404 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.578e-20
Identity = 49/154 (31.82%), Postives = 82/154 (53.25%), Query Frame = 3
Query:  159 PGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLG 620
            P P   P++GNL  L   PH+S+  L+  +GPLM L  G                LK HD  F++RP +   + + Y  +++   PYG  WR ++ +S +HL S K +  ++ VRQEE+ ++   +  + ++PVNL++ L+    + + RV LG
Sbjct:   31 PSPPRLPLIGNLHQLSQHPHRSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKSSSKPVNLSKILSSLTNDVICRVALG 184          
BLAST of FC876404 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.061e-20
Identity = 55/161 (34.16%), Postives = 85/161 (52.80%), Query Frame = 3
Query:  156 PPGPKPWPIVGNLPHL-GPMP-HQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEP----VNLAQRLNLCVVNALGRVMLG 620
            PPGP+  P++GN+  + G +P H  +  LA  +GPLM+L+LG              + +K HD NFS+RP    ++ ++YN   IVF  +G  WR LRKI +V L + K +  +R +R+EE+A L + +A+  +E      NL Q +         R   G
Sbjct:   44 PPGPRTLPLIGNIHQIVGSLPVHYYLKNLADKYGPLMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDRPDFVLSRIVSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEEVAELVKKIAATASEEGGSIFNLTQSIYSMTFGIAARAAFG 204          
BLAST of FC876404 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.691e-20
Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = 3
Query:  156 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGA-KHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAG 548
            PP P P PI+G+L  L P PHQ    L+  +GP+++L LG              +FLK H+  FSNRP N+ A + + Y +QD +F PYGP W+ ++K+    L  G  LD +  VRQ E     + +   G
Sbjct:   32 PPSPMPLPIIGHLHLLSPTPHQDFHKLSLRYGPIIHLFLGSVPCVVASTAEAAKEFLKTHEPAFSNRPANTVAVETLTYGFQDFLFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQXETKKFIKRVLQKG 163          
BLAST of FC876404 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.691e-20
Identity = 52/157 (33.12%), Postives = 84/157 (53.50%), Query Frame = 3
Query:  156 PPGPKPWPIVGNLPHL-GPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPN-SGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLG 620
            PPGP   PI+GN   L G   H  +  LA+ +GPLM+L++G              +  + HD  F++RP N    K ++Y++ D+V  PYG  WR LRKIS + L S K++  +R +R+EE+    +++ S     +NL++ ++L +     R   G
Sbjct:   27 PPGPPQIPILGNAHQLSGGHTHHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADRPSNLESFKIVSYDFSDMVVSPYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSIGSKEGTRINLSKEISLLIYGITTRAAFG 183          
BLAST of FC876404 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.691e-20
Identity = 52/158 (32.91%), Postives = 81/158 (51.27%), Query Frame = 3
Query:  156 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEE---MAVLTRALASAGTEPVNLAQRLNLCVVNALGRVMLG 620
            PP P+  PI+GNL  LG  PH+S+  L++ +GP+M L LG                +K +D  +SNRP +  A  + Y  +D+ F P+G  WR +R I+ +HL S K +  YR  R+EE   M    + ++++ +   +L         N + RV LG
Sbjct:   26 PPSPRKLPIIGNLHQLGLHPHRSLHKLSKKYGPVMLLHLGSKPVIVASSVEAVRDIMKTNDLVWSNRPKSKMADRLIYGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKLKQMSNSSSSATDLRDLFCWLAYNIINRVALG 183          
BLAST of FC876404 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 3.515e-20
Identity = 48/136 (35.29%), Postives = 76/136 (55.88%), Query Frame = 3
Query:  156 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALASAGTEPVN 563
            PPGP   PI+GNL  LG + ++S   +++ +GP++ LRLG              + LK HD     RP  +      YN++DI F P+G  WR +RKI+++ LFS K L  +R++R+EE  +L + ++ +  E  N
Sbjct:   29 PPGPIGLPIIGNLHQLGKLLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTRPKTAATGLFTYNFKDIGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDETQN 164          
BLAST of FC876404 vs. ExPASy Swiss-Prot
Match: C71BL_ARATH (Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=CYP71B21 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.995e-20
Identity = 56/157 (35.67%), Postives = 83/157 (52.87%), Query Frame = 3
Query:  156 PPGPKPWPIVGNLPHLGPMPHQSIAGLARTHGPLMYLRLGFXXXXXXXXXXXXXQFLKIHDSNFSNRPPNSGAKHIAYNYQDIVFRPYGPRWRMLRKISSVHLFSGKALDDYRHVRQEEMAVLTRALA-SAGTEP-VNLAQRLNLCVVNALGRVMLG 620
            PPGP   PI+GNL  LG   H+S   L++ +GP+M+LR G              + LK HD     RP  S      YN++DI F  YG  WR +RK++ + LFS K L  +R++R+EE  +L + +  SA T+  V+L + L     + + R+  G
Sbjct:   29 PPGPISLPIIGNLHQLGKSLHRSFYKLSQEYGPVMFLRFGVVPVVVFSTKEAAEEVLKTHDLETCTRPKLSATGLFTYNFKDIGFAQYGEDWREMRKLAMLELFSSKKLKAFRYIREEESELLVKKVTESAQTQTLVDLRKALFSYTASIVCRLAFG 185          
The following BLAST results are available for this feature:
BLAST of FC876404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
C71AQ_ARATH9.250e-2132.47Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C93A1_SOYBN1.208e-2035.85Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C71BW_ARATH1.208e-2032.69Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71AN_ARATH1.578e-2031.82Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C71DA_SOYBN2.061e-2034.16Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C93A3_SOYBN2.691e-2037.12Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C71DC_CATRO2.691e-2033.12Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71A3_SOLME2.691e-2032.91Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C71BZ_ARATH3.515e-2035.29Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71BL_ARATH5.995e-2035.67Cytochrome P450 71B21 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC32004D03EF DevOvary1 Citrus clementina cDNA clone C32004D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876404 ID=FC876404; Name=FC876404; organism=Citrus clementina; type=EST; length=622bp
GACTCGTACCATTTCTACACTTTCTCTGGGAAACGAAACAAAGAGCAATG
TCTACTTTACCACTACTGATACTGTACACATCACTTTTGGCAATTGTCAT
TTCTTTCCTTTTTAGCCTCCTCCGGAACAGACGCAGACACTCCTCCCACC
GTCTGCCTCCCGGTCCGAAACCCTGGCCAATAGTCGGAAACCTCCCTCAC
TTGGGCCCTATGCCCCACCAATCCATAGCGGGTCTGGCCCGAACCCACGG
CCCCCTCATGTACCTCCGGTTAGGCTTCGTTGACGTCGTCGTGGCCGCTT
CCGCATCCGTGGCGGCCCAATTCCTGAAGATCCATGATTCCAACTTCTCC
AACCGCCCTCCCAACTCCGGCGCCAAGCACATCGCTTACAACTATCAGGA
CATCGTTTTCCGGCCGTACGGCCCCCGCTGGCGGATGCTGAGGAAGATCA
GCTCCGTTCATCTTTTCTCCGGCAAGGCCTTGGATGACTACAGGCACGTT
CGCCAGGAAGAGATGGCGGTGCTCACGCGCGCGTTGGCGAGTGCAGGAAC
GGAGCCGGTGAACTTAGCTCAACGGTTGAACTTGTGCGTTGTGAATGCCC
TAGGGCGGGTGATGCTAGGCTT
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