FC876405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876405 vs. ExPASy Swiss-Prot
Match: PSBO_CHLRE (Oxygen-evolving enhancer protein 1, chloroplastic OS=Chlamydomonas reinhardtii GN=PSBO PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.353e-34 Identity = 73/140 (52.14%), Postives = 91/140 (65.00%), Query Frame = 3 Query: 285 ATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDSFA-FKPGKYQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFL 701 A +A ++ A G LT+DEIQ TY++VKG+G AN CP ++ G + K G Y+ + FC+EPTSFTVK E K +F TKLMTRLTYTLD + G F+V DG+ + E DGIDYAA TVQL GGERV FL Sbjct: 34 AAAAAALATAMVAGSANALTFDEIQGLTYLQVKGSGIANTCPVLESGTTNLKELKAGSYKLENFCIEPTSFTVKEESQFKGGETEFVKTKLMTRLTYTLDAMSGSFKVGSDGSAELKEDDGIDYAATTVQLPGGERVAFL 173
BLAST of FC876405 vs. ExPASy Swiss-Prot
Match: PSBO_EUGGR (Oxygen-evolving enhancer protein 1, chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.829e-32 Identity = 75/147 (51.02%), Postives = 91/147 (61.90%), Query Frame = 3 Query: 267 IAGFALATSALVVSGASAEGV-PKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGVDS-FAFKPGKYQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFL 701 +AG A A ++ A A LTYDE+QS +Y+EVK +G A CP + GV S + K GKY+ +CLEP+SF VK K +F+ TKLMTRLTYTLD I V DG+ EKDG+DYAA TVQLAGGERVPFL Sbjct: 71 LAGAGRAMGAALIGAAVAGSANAASLTYDELQSLSYLEVKSSGIAGTCPVLADGVSSKLSLKAGKYEINNWCLEPSSFQVKLPPTEKQQVTEFERTKLMTRLTYTLDAISADLNVGGDGSWTIQEKDGLDYAATTVQLAGGERVPFL 217
BLAST of FC876405 vs. ExPASy Swiss-Prot
Match: PSBO_THEEB (Photosystem II manganese-stabilizing polypeptide OS=Thermosynechococcus elongatus (strain BP-1) GN=psbO PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.097e-24 Identity = 55/117 (47.01%), Postives = 80/117 (68.38%), Query Frame = 3 Query: 357 QSKTYMEVKGTGTANQCPTIDGGV-DSFAFKPGK-YQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFL 701 Q+ TY ++ GTG AN+CPT+D ++ + Y+ + CL+PT+F VK E NK +F TKL+TR T +LD+I+G +V+ DG++ FVE+DGID+ VTVQ+AGGER+P L Sbjct: 29 QTLTYDDIVGTGLANKCPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKEEPKNKRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLL 145
BLAST of FC876405 vs. ExPASy Swiss-Prot
Match: PSBO_SYNEN (Photosystem II manganese-stabilizing polypeptide OS=Synechococcus elongatus naegeli GN=psbO PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.097e-24 Identity = 55/117 (47.01%), Postives = 80/117 (68.38%), Query Frame = 3 Query: 357 QSKTYMEVKGTGTANQCPTIDGGV-DSFAFKPGK-YQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFL 701 Q+ TY ++ GTG AN+CPT+D ++ + Y+ + CL+PT+F VK E NK +F TKL+TR T +LD+I+G +V+ DG++ FVE+DGID+ VTVQ+AGGER+P L Sbjct: 29 QTLTYDDIVGTGLANKCPTLDDTARGAYPIDSSQTYRIARLCLQPTTFLVKEEPKNKRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPLL 145
BLAST of FC876405 vs. ExPASy Swiss-Prot
Match: PSBO_ANASP (Photosystem II manganese-stabilizing polypeptide OS=Anabaena sp. (strain PCC 7120) GN=psbO PE=3 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 4.515e-23 Identity = 55/116 (47.41%), Postives = 75/116 (64.66%), Query Frame = 3 Query: 366 TYMEVKGTGTANQCP----TIDGGVDSFAFKPGKYQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFL 701 TY +++GTG AN+CP T G + + K Y K+ CLEPT+F VK E NK +F KL+TR T T+D++ G + + D ++ FVEKDG+D+ A+TVQL GGERVPFL Sbjct: 34 TYEQIRGTGLANKCPQLTETSRGSIPLDSSK--SYVLKELCLEPTNFFVKEEPANKRQTAEFVAGKLLTRYTSTIDQVSGDLKFNDDSSLTFVEKDGLDFQAITVQLPGGERVPFL 147
BLAST of FC876405 vs. ExPASy Swiss-Prot
Match: PSBO_CYAA5 (Photosystem II manganese-stabilizing polypeptide OS=Cyanothece sp. (strain ATCC 51142) GN=psbO PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.955e-19 Identity = 52/116 (44.83%), Postives = 67/116 (57.76%), Query Frame = 3 Query: 357 QSKTYMEVKGTGTANQCPTIDGGV-DSFAFKPGK-YQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPF 698 Q TY E+ TG AN+CP I S +PG+ Y CLEP + VK E VNK ++ KL+TR T +L++I G V DG + F E+ GID+ VTVQL GGE+VPF Sbjct: 32 QDLTYDEILNTGLANKCPQISEFTRGSIPIEPGQTYFVDDLCLEPQEYFVKEEPVNKRQEAEYVPGKLLTRYTTSLEQISGKITVDEDGVVTFYEEGGIDFQPVTVQLPGGEQVPF 147
BLAST of FC876405 vs. ExPASy Swiss-Prot
Match: PSBO_SYNY3 (Photosystem II manganese-stabilizing polypeptide OS=Synechocystis sp. (strain PCC 6803) GN=psbO PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.503e-18 Identity = 49/113 (43.36%), Postives = 65/113 (57.52%), Query Frame = 3 Query: 366 TYMEVKGTGTANQCPTIDGGV-DSFAFKPG-KYQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPF 698 TY ++ TG AN CP I + +P KY FC+EP + VK E VNK ++ K++TR T +L++I G V DGT+ F EKDGID+ +TV L GGE VPF Sbjct: 35 TYDDIVNTGLANVCPEISSFTRGTIEVEPNTKYFVSDFCMEPQEYFVKEEPVNKRQKAEYVKGKVLTRQTTSLEQIRGSIAVGADGTLTFKEKDGIDFQPITVLLPGGEEVPF 147
BLAST of FC876405 vs. ExPASy Swiss-Prot
Match: PSBO_SYNE7 (Photosystem II manganese-stabilizing polypeptide OS=Synechococcus elongatus (strain PCC 7942) GN=psbO PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.503e-18 Identity = 50/122 (40.98%), Postives = 71/122 (58.20%), Query Frame = 3 Query: 342 TYDEIQSKTYMEVKGTGTANQCPTI-DGGVDSFAFKPGK-YQAKKFCLEPTSFTVKAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFL 701 T ++ + TY ++K TG AN+C ++ + + + GK Y CLEP F VK E NK +F K++TR T +LD++ G + DGT+ F EK GID+ A+TV L GGE VPFL Sbjct: 26 TAADLGTLTYDQIKDTGLANKCLSLKESARGTIPLEAGKKYALTDLCLEPQEFFVKEEPGNKRQKAEFVPGKVLTRYTSSLDQVYGDLALKADGTVSFTEKGGIDFQAITVLLPGGEEVPFL 147
BLAST of FC876405 vs. ExPASy Swiss-Prot
Match: PSBO_POPEU (Oxygen-evolving enhancer protein 1, chloroplastic (Fragments) OS=Populus euphratica GN=PSBO PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 38/67 (56.72%), Postives = 40/67 (59.70%), Query Frame = 3 Query: 501 KAEGVNKNAPPDFQNTKLMTRLTYTLDEIEGPFEVSPDGTIKFVEKDGIDYAAVTVQLAGGERVPFL 701 KAEG+NKN+PPDFQ TKLMTR DGIDYAAVTVQL GGERVPFL Sbjct: 10 KAEGINKNSPPDFQKTKLMTR-------------------------DGIDYAAVTVQLPGGERVPFL 51 The following BLAST results are available for this feature:
BLAST of FC876405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876405 ID=FC876405; Name=FC876405; organism=Citrus clementina; type=EST; length=722bpback to top |