FC876407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876407 vs. ExPASy Swiss-Prot
Match: THS2_ARAHY (Putative stilbene synthase 2 (Fragment) OS=Arachis hypogaea PE=5 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 7.083e-59 Identity = 86/105 (81.90%), Postives = 96/105 (91.43%), Query Frame = 1 Query: 286 LKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENN 600 LKENPNMCAY APSLDAR+D+++ EVP++GKEAATKAIKEWGQP SKITHLIFCTTSGV +PG DY+L L+GL PSVKR+MMY QGCFAGGTVLRLAKDLAENN Sbjct: 1 LKENPNMCAYKAPSLDAREDMMIREVPRVGKEAATKAIKEWGQPMSKITHLIFCTTSGVALPGVDYELIVLLGLDPSVKRYMMYHQGCFAGGTVLRLAKDLAENN 105 HSP 2 Score: 63.5438 bits (153), Expect = 7.083e-59 Identity = 30/39 (76.92%), Postives = 35/39 (89.74%), Query Frame = 3 Query: 606 ARVLVVCSEITAVTFRGPADTHLDSLVGQALXGDGAAAV 722 ARVL+VCSE TAVTFRGP++T +DSLVGQAL DGAAA+ Sbjct: 108 ARVLIVCSENTAVTFRGPSETDMDSLVGQALFADGAAAI 146
BLAST of FC876407 vs. ExPASy Swiss-Prot
Match: CHS6_MEDSA (Chalcone synthase 6-4 (Fragment) OS=Medicago sativa GN=CHS6-4 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.081e-53 Identity = 73/77 (94.81%), Postives = 75/77 (97.40%), Query Frame = 1 Query: 370 LGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENN 600 LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENN Sbjct: 1 LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENN 77 HSP 2 Score: 76.2554 bits (186), Expect = 1.081e-53 Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 3 Query: 600 QGARVLVVCSEITAVTFRGPADTHLDSLVGQALXGDGAAAV 722 +GARVLVVCSE+TAVTFRGP+DTHLDSLVGQAL GDGAAA+ Sbjct: 78 KGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAAL 118
BLAST of FC876407 vs. ExPASy Swiss-Prot
Match: CHS7_MEDSA (Chalcone synthase (Fragment) OS=Medicago sativa GN=CHSII PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.295e-40 Identity = 53/58 (91.38%), Postives = 55/58 (94.83%), Query Frame = 1 Query: 427 ITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENN 600 ITHLI CTTS VDMPGADYQLTKL+GLRP VKR+MMYQQGCFAGGTVLRLAKDLAENN Sbjct: 1 ITHLIVCTTS-VDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENN 57 HSP 2 Score: 76.2554 bits (186), Expect = 5.295e-40 Identity = 36/41 (87.80%), Postives = 40/41 (97.56%), Query Frame = 3 Query: 600 QGARVLVVCSEITAVTFRGPADTHLDSLVGQALXGDGAAAV 722 +GARVLVVCSE+TAVTFRGP+DTHLDSLVGQAL GDGAAA+ Sbjct: 58 KGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAAL 98
BLAST of FC876407 vs. ExPASy Swiss-Prot
Match: CHSY_MALDO (Chalcone synthase (Fragment) OS=Malus domestica GN=CHS PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.572e-24 Identity = 38/41 (92.68%), Postives = 40/41 (97.56%), Query Frame = 3 Query: 600 QGARVLVVCSEITAVTFRGPADTHLDSLVGQALXGDGAAAV 722 +GARVLVVCSEITAVTFRGP+DTHLDSLVGQAL GDGAAAV Sbjct: 25 KGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAV 65 HSP 2 Score: 53.1434 bits (126), Expect = 3.572e-24 Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 1 Query: 529 MMYQQGCFAGGTVLRLAKDLAENN 600 MMYQQGCFAGGTVLRLAKDLAENN Sbjct: 1 MMYQQGCFAGGTVLRLAKDLAENN 24
BLAST of FC876407 vs. ExPASy Swiss-Prot
Match: PKS1_DICDI (Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.848e-18 Identity = 54/196 (27.55%), Postives = 99/196 (50.51%), Query Frame = 1 Query: 7 TLTKHEPQTYSLRVQLEMATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAE 594 ++ +H+ Q ++V ++ R + +++ + VL IG + P ++Q D + E EK KR+ ++S IK R++ + + EN ++ D V VP L ++A +A+K+WG K ITH++ T++G+ +P +++L L+GL V+R + GC AG + LR A LA+ Sbjct: 2755 SVQQHQKQQQKVQV-IQQQQQPLSRLSYKSNNNSFVLGIGISVPGEPISQQSLKDSISNDFSDK--AETNEKVKRIFEQSQIKTRHL-VRDYTKPENSIKFRHLETITDVNNQFKKV-VPDLAQQACLRALKDWGGDKGDITHIVSVTSTGIIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAK 2945 HSP 2 Score: 26.9498 bits (58), Expect = 3.848e-18 Identity = 13/37 (35.14%), Postives = 22/37 (59.46%), Query Frame = 3 Query: 609 RVLVVCSEITAVTFRGPADTHLDSLVGQALXGDGAAA 719 R+LVVC+E+ ++ F D +V ++ DG+AA Sbjct: 2951 RILVVCTEVCSLHFSNTDGG--DQMVASSIFADGSAA 2985 The following BLAST results are available for this feature:
BLAST of FC876407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876407 ID=FC876407; Name=FC876407; organism=Citrus clementina; type=EST; length=723bpback to top |