FC876410

Overview
NameFC876410
Unique NameFC876410
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length639
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10351 contig Ccv1_Contig10351:1..639. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: RENI1_MOUSE (Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.137e-16
Identity = 52/152 (34.21%), Postives = 75/152 (49.34%), Query Frame = 1
Query:  196 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLV---GQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFFS 639
            L L+ SP  F+LP        +  KK+  +  ++   G  +++         +R +L        T  V L N+++ QY+GE+ IGTP QTF VIFDTGS+NLWVPS KC    +              +Y  NG+   I YG+G + GF S
Sbjct:   11 LLLLWSPCTFSLPTRTATFERIPLKKMPSVREILEERGVDMTRLSAEWGVFTKRPSLTNL-----TSPVVLTNYLNTQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGSDFTIHYGSGRVKGFLS 157          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: RENI2_MOUSE (Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.485e-16
Identity = 52/149 (34.90%), Postives = 76/149 (51.01%), Query Frame = 1
Query:  196 LFLILSPAAFALPNDGLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKC-YFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFFS 639
            L L+ SP  F+LP  G     +  KK+  +  ++ +    +   +      +    SL D  + +V L N++++QY+GE+ IGTP QTF VIFDTGS+NLWVPS KC    +              +Y  NG    I YG+G + GF S
Sbjct:   11 LLLLWSPCTFSLPT-GTTFERIPLKKMPSVREILEER-GVDMTRLSAEWDVFTKRSSLTDLISPVV-LTNYLNSQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGDDFTIHYGSGRVKGFLS 156          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: RENI_SHEEP (Renin OS=Ovis aries GN=REN PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.940e-16
Identity = 42/87 (48.28%), Postives = 50/87 (57.47%), Query Frame = 1
Query:  382 TDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCY-FSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFFS 639
            T  V L N++D QY+GE+ IGTP QTF VIFDTGS+NLWVPS KC                   +Y  NGT   I YG+G + GF S
Sbjct:   67 TSPVVLTNYLDTQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSPLYTACEIHSLYDSLESSSYVENGTEFTIYYGSGKVKGFLS 153          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: RENI_CANFA (Renin OS=Canis familiaris GN=REN PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.940e-16
Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 1
Query:  376 SDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCY-FSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFFS 639
            + T  V L N++D QY+GE+ IGTP QTF V+FDTGS+NLWVPS +C                   +Y  NGT+  I+YG+G + GF S
Sbjct:   70 NSTSPVVLTNYLDTQYYGEIGIGTPPQTFKVVFDTGSANLWVPSTRCSPLYTACEIHCLYDSSESSSYMENGTTFTIRYGSGKVKGFLS 158          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: CATE_RANCA (Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.370e-16
Identity = 48/130 (36.92%), Postives = 69/130 (53.08%), Query Frame = 1
Query:  241 GLVRIGLRKKKLDQINRLVGQTVSKEEETMRTPVRRYNLHGSLGDSDTDIVALNNFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISG 630
            G++R+ L+++K   + +++ +         +       L  S    +T    L N++D +YFG++SIGTP Q FTVIFDTGSSNLWVPS  C  S               TY  NG +  IQYGTG ++G
Sbjct:   16 GIIRVPLKRQK--SMRKILKEKGKLSHLWTKQGNEFLQLSDSCSSPETASEPLMNYLDVEYFGQISIGTPPQQFTVIFDTGSSNLWVPSIYC-TSQACTKHNRYRPSESTTYVSNGEAFFIQYGTGNLTG 142          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: PEPC_SUNMU (Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 9.626e-16
Identity = 40/77 (51.95%), Postives = 50/77 (64.94%), Query Frame = 1
Query:  406 FMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFF 636
            +MDA YFGE+SIGTP Q F V+FDTGSSNLWVPS  C  S               TY  NG + ++QYG+G+++GFF
Sbjct:   68 YMDASYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTGHARFNPNQSSTYSTNGQTFSLQYGSGSLTGFF 143          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: PEPC_CALJA (Gastricsin OS=Callithrix jacchus GN=PGC PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.626e-16
Identity = 40/78 (51.28%), Postives = 51/78 (65.38%), Query Frame = 1
Query:  403 NFMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFF 636
            ++MDA YFGE+SIGTP Q F V+FDTGSSNLWVPS  C  S               TY  NG + ++QYG+G+++GFF
Sbjct:   67 DYMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSASSTYSSNGQTFSLQYGSGSLTGFF 143          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: PEPC_MACFU (Gastricsin (Fragment) OS=Macaca fuscata fuscata GN=PGC PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.257e-15
Identity = 40/77 (51.95%), Postives = 50/77 (64.94%), Query Frame = 1
Query:  406 FMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFF 636
            +MDA YFGE+SIGTP Q F V+FDTGSSNLWVPS  C  S               TY  NG + ++QYG+G+++GFF
Sbjct:   57 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLTGFF 132          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: PEPC_HUMAN (Gastricsin OS=Homo sapiens GN=PGC PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.257e-15
Identity = 40/77 (51.95%), Postives = 50/77 (64.94%), Query Frame = 1
Query:  406 FMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFF 636
            +MDA YFGE+SIGTP Q F V+FDTGSSNLWVPS  C  S               TY  NG + ++QYG+G+++GFF
Sbjct:   68 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLTGFF 143          
BLAST of FC876410 vs. ExPASy Swiss-Prot
Match: PEPC_SORUN (Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.801e-15
Identity = 39/77 (50.65%), Postives = 50/77 (64.94%), Query Frame = 1
Query:  406 FMDAQYFGEVSIGTPSQTFTVIFDTGSSNLWVPSAKCYFSVXXXXXXXXXXXXXXTYXRNGTSAAIQYGTGAISGFF 636
            ++DA YFGE+SIGTP Q F V+FDTGSSNLWVPS  C  S               TY  NG + ++QYG+G+++GFF
Sbjct:   68 YLDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTGHARFNPSKSSTYSTNGQTFSLQYGSGSLTGFF 143          
The following BLAST results are available for this feature:
BLAST of FC876410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
RENI1_MOUSE1.137e-1634.21Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1[more]
RENI2_MOUSE1.485e-1634.90Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1[more]
RENI_SHEEP1.940e-1648.28Renin OS=Ovis aries GN=REN PE=2 SV=1[more]
RENI_CANFA1.940e-1644.94Renin OS=Canis familiaris GN=REN PE=2 SV=1[more]
CATE_RANCA7.370e-1636.92Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1[more]
PEPC_SUNMU9.626e-1651.95Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2[more]
PEPC_CALJA9.626e-1651.28Gastricsin OS=Callithrix jacchus GN=PGC PE=1 SV=1[more]
PEPC_MACFU1.257e-1551.95Gastricsin (Fragment) OS=Macaca fuscata fuscata GN... [more]
PEPC_HUMAN1.257e-1551.95Gastricsin OS=Homo sapiens GN=PGC PE=1 SV=1[more]
PEPC_SORUN2.801e-1550.65Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32004D11EF DevOvary1 Citrus clementina cDNA clone C32004D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876410 ID=FC876410; Name=FC876410; organism=Citrus clementina; type=EST; length=639bp
GAAAACAATTCAAACTCGAATTAACGGCCAAAGCACATACTCCAGAAACG
CATTTTATTCGCTTTTCTTTCTTTATTCTGACCCTCGATTTCTCGGTCTC
GTCAGTCCACTTCTTTACTCTGTCTGTGCTCTTTTGAAAGATACTCAGTT
GTCGACATGGGAACCAAATTCACAGCCATTCGGGTTGCACTTTTTCTTTT
TCTCATTTTGTCCCCTGCGGCCTTTGCTTTGCCAAATGATGGATTGGTAA
GAATTGGGCTGAGAAAGAAGAAATTGGATCAGATCAATCGCCTTGTTGGA
CAGACTGTATCTAAGGAAGAGGAAACGATGAGAACACCTGTCAGAAGATA
TAATCTCCATGGTAGTCTTGGAGATTCTGATACTGATATTGTTGCATTAA
ATAACTTTATGGATGCTCAGTATTTTGGGGAGGTTAGTATTGGCACACCT
TCCCAGACCTTCACTGTGATATTTGACACAGGAAGTTCTAATCTTTGGGT
GCCTTCTGCGAAGTGTTATTTCTCAGTTTCTTGCTATTTCCACTCCAAGT
ATAAGTCCAGCCATTCAAGTACCTACNAAAGGAATGGGACATCTGCCGCA
ATCCAATATGGGACTGGAGCAATTTCTGGTTTCTTTAGC
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